GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000015-TA|BGIBMGA000015-PA|IPR012464|Protein of unknown
function DUF1676
         (303 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.52 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.52 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.9  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 70  YPIDFPSASSHAYSMNGVSPQFASPDIYNPTGLGQSNVHDILQHD 114
           YPI +   ++H  + N +SP+     + NPT + +S ++++L HD
Sbjct: 74  YPI-YKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLL-HD 116


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 70  YPIDFPSASSHAYSMNGVSPQFASPDIYNPTGLGQSNVHDILQHD 114
           YPI +   ++H  + N +SP+     + NPT + +S ++++L HD
Sbjct: 74  YPI-YKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLL-HD 116


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory
          receptor candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 9  FGMKSAGAVIFAFTVVAVLTIKAFIASKLA 38
          F  KSA  V   FT++    I  F   K+A
Sbjct: 48 FSWKSARVVYALFTLLGTFLISGFQMQKIA 77


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory
          receptor candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 9  FGMKSAGAVIFAFTVVAVLTIKAFIASKLA 38
          F  KSA  V   FT++    I  F   K+A
Sbjct: 48 FSWKSARVVYALFTLLGTFLISGFQMQKIA 77


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 90  QFASPDIYNPTGLGQSNVHDILQHDANAQPSQQAPTLQLI 129
           Q   P   +   L  +  H++ +HD +   +Q  PT++ I
Sbjct: 118 QLPHPAAAHSALLSPAMPHNLTRHDGSVIKNQGMPTMEAI 157


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,395
Number of Sequences: 317
Number of extensions: 2629
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 303
length of database: 114,650
effective HSP length: 57
effective length of query: 246
effective length of database: 96,581
effective search space: 23758926
effective search space used: 23758926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)