GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000015-TA|BGIBMGA000015-PA|IPR012464|Protein of unknown
function DUF1676
         (303 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     27   0.86 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.5  
AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-l...    25   3.5  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   8.1  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 51  YDSYGVGVGLQNHPYLYSQYPIDFPSASS-HAYSMNGVSPQF-ASPDIYNPTGL 102
           Y SY      Q HPY     P  + +AS+  +  + G  P   +S + YN +GL
Sbjct: 178 YPSYPTEANFQPHPYYPKYEPDAYITASTERSRGVTGDQPSLQSSYESYNSSGL 231


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 265  VQCSMEARELLQNPFRATNPANEL 288
            + CS +A  +  N ++ TN  NE+
Sbjct: 3013 IDCSQDASSITSNSYKVTNWINEI 3036


>AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-like
           4 protein protein.
          Length = 161

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 99  PTGLGQSNVHDILQHDANAQPSQQAPTLQLINGTRAAERWDGKSKLERLFD 149
           P    Q  ++ +LQ +   +P+Q   TL ++      +  +G  +L++  D
Sbjct: 77  PARQDQRTLYQLLQPEIMKRPAQNQSTLAMLTALEMGQVVEGNGELKKQQD 127


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 188 IEEVKTPREFLQPQPRLIAQRKNARKNKPKKFSG 221
           +E + T R++ QP  R +AQ   AR +K +  +G
Sbjct: 217 VERLYT-RDYEQPDERYLAQETEARLHKLRGSTG 249


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,188
Number of Sequences: 2123
Number of extensions: 10389
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 4
length of query: 303
length of database: 516,269
effective HSP length: 64
effective length of query: 239
effective length of database: 380,397
effective search space: 90914883
effective search space used: 90914883
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)