GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000015-TA|BGIBMGA000015-PA|IPR012464|Protein of unknown
function DUF1676
         (303 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL603965-4|CAH70575.1|  276|Homo sapiens annexin A8-like 2 protein.    31   3.8  
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL...    31   6.6  
AK056672-1|BAB71248.1|  600|Homo sapiens protein ( Homo sapiens ...    31   6.6  
AB065927-1|BAC06142.1|  324|Homo sapiens seven transmembrane hel...    31   6.6  

>AL603965-4|CAH70575.1|  276|Homo sapiens annexin A8-like 2 protein.
          Length = 276

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 20/166 (12%)

Query: 55  GVGVGLQNHPYLYSQYPIDFPSASSHAYSMNGVSPQFASPDIY-NPTGLGQSNVHDILQH 113
           G+GVG Q    L S     F   SS   ++  VSP      +  NP G  +  + D+L  
Sbjct: 36  GIGVGSQ----LLSHQAAAFAFPSS---ALTSVSPWGQQGHLCCNPAGTNEQAIIDVLTK 88

Query: 114 DANAQPSQQAPTLQLINGTRAAERWDGKSKLERLFDPIIKKFRRIIEPIATVVYDAMPAT 173
            +N Q  Q A         ++ +   GK   E L   +  KF R+   I  ++Y      
Sbjct: 89  RSNTQRQQIA---------KSFKAQFGKDLTETLKSELSGKFERL---IVALMYPPYRYE 136

Query: 174 FRDLNTATTKSVEAIEEVKTPREFLQPQPRLIAQRKNARKNKPKKF 219
            ++L+ A   S + +     P   LQ    L A  +N R     KF
Sbjct: 137 AKELHDAMKGSRDDVSSFVDPALALQDAQDLYAAGENIRGTDEMKF 182


>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
           FLJ32110 protein.
          Length = 1349

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 91  FASPDIYNPTGLGQSNVHDILQHDANAQPSQQAPTLQLINGTRAAERWDGKSKLERLFDP 150
           F+ P+IYN +    + + + L   ++ +PS+Q  T+ L   +R   R     K ER    
Sbjct: 367 FSPPNIYNHS---DARISECLDEFSSLEPSEQKSTVHLNPNSRIENREKSLDKTER---- 419

Query: 151 IIKKFRRIIEPIATVVYDAMPATF 174
           + K  +R+++   T    + P  F
Sbjct: 420 VSKNVQRLVKEACTHNVASKPLPF 443


>AK056672-1|BAB71248.1|  600|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32110 fis, clone OCBBF2001527. ).
          Length = 600

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 91  FASPDIYNPTGLGQSNVHDILQHDANAQPSQQAPTLQLINGTRAAERWDGKSKLERLFDP 150
           F+ P+IYN +    + + + L   ++ +PS+Q  T+ L   +R   R     K ER    
Sbjct: 367 FSPPNIYNHS---DARISECLDEFSSLEPSEQKSTVHLNPNSRIENREKSLDKTER---- 419

Query: 151 IIKKFRRIIEPIATVVYDAMPATF 174
           + K  +R+++   T    + P  F
Sbjct: 420 VSKNVQRLVKEACTHNVASKPLPF 443


>AB065927-1|BAC06142.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 8   LFGMKSAGAVIFAFTVVAVLTIKAFIAS-KLALMVTVGMALKKLYDSYGVGVGLQNHPYL 66
           +FG      +I ++T +    ++   AS K   + T G  L  +   YG G+G+    Y+
Sbjct: 205 IFGGVPLSGIILSYTQITSCVLRMPSASGKHKAVSTCGSHLSIVLLFYGAGLGV----YI 260

Query: 67  YSQYPIDFPSASSHAYSMNGVSPQFASPDIYN 98
            S    D P  ++ A  M  V PQ  +P IY+
Sbjct: 261 -SSVVTDSPRKTAVASVMYSVFPQMVNPFIYS 291


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,084,821
Number of Sequences: 224733
Number of extensions: 1525365
Number of successful extensions: 3135
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3135
Number of HSP's gapped (non-prelim): 4
length of query: 303
length of database: 73,234,838
effective HSP length: 90
effective length of query: 213
effective length of database: 53,008,868
effective search space: 11290888884
effective search space used: 11290888884
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)