Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000015-TA|BGIBMGA000015-PA|IPR012464|Protein of unknown
function DUF1676
(303 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical pr... 39 0.004
U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical pr... 31 1.3
AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans GDP-4-keto-6-... 31 1.3
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 30 1.8
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 30 1.8
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z82285-2|CAD56248.1| 622|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82285-1|CAB05302.1| 634|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 9.5
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 9.5
>Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical
protein T12A7.1 protein.
Length = 625
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 33 IASKLALMVTVGMALKKLYDSYGVGVGLQNHPYLYSQYPIDFPSASSHAYSMNGVSPQFA 92
IA + L + K +++YG G L NH + + +P+D SS +NGV +
Sbjct: 363 IALRSVLTICQHYNSSKTFEAYGFGAKLPNHQTVSAVFPLDLNRQSSSVVGINGVMNAYR 422
Query: 93 SPDIYNPTGLGQSNVHDILQHDAN 116
+ N T G +N I+ AN
Sbjct: 423 HA-LQNVTLYGPTNFSPIIVEVAN 445
>U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical
protein R01H2.5 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 62 NHPYLYSQYPIDFPS---ASSHAYSMNGVSP--QFASPDIYNPTGLGQSNVHDILQHDAN 116
N Y Y++ ID + A H V P F D YN L +V L H A
Sbjct: 134 NFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPHDNYN---LQSGHVLPALIHKAY 190
Query: 117 AQPSQQAPTLQLINGTRAAERWDGKSKLERLFDPIIKKFRRIIEPIATVVYDAMPATFRD 176
P LQ+ ++ L RLF +++++ + EPI V ++ + RD
Sbjct: 191 VAQRDGTP-LQVYGSGTPLRQFIYSIDLARLFIRVVREYEDV-EPIILSVNESDEVSIRD 248
Query: 177 LNTATTKSVEAIEEVK 192
+A K+++ +V+
Sbjct: 249 AVSAVVKAIDFTGDVE 264
>AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 62 NHPYLYSQYPIDFPS---ASSHAYSMNGVSP--QFASPDIYNPTGLGQSNVHDILQHDAN 116
N Y Y++ ID + A H V P F D YN L +V L H A
Sbjct: 134 NFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPHDNYN---LQSGHVLPALIHKAY 190
Query: 117 AQPSQQAPTLQLINGTRAAERWDGKSKLERLFDPIIKKFRRIIEPIATVVYDAMPATFRD 176
P LQ+ ++ L RLF +++++ + EPI V ++ + RD
Sbjct: 191 VAQRDGTP-LQVYGSGTPLRQFIYSIDLARLFIRVVREYEDV-EPIILSVNESDEVSIRD 248
Query: 177 LNTATTKSVEAIEEVK 192
+A K+++ +V+
Sbjct: 249 AVSAVVKAIDFTGDVE 264
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans
homeobox protein 16 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 66 LYSQYPIDFPSASSHAYSMNGVSPQFASPD 95
L S YP P+ S+ A S + +SP FASP+
Sbjct: 11 LSSPYPCPSPTISTPATSPSSISPTFASPN 40
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene
16 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 66 LYSQYPIDFPSASSHAYSMNGVSPQFASPD 95
L S YP P+ S+ A S + +SP FASP+
Sbjct: 11 LSSPYPCPSPTISTPATSPSSISPTFASPN 40
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 72 IDFPSASSHAYSMNGVSPQFASPDIYNPTGLGQSNVHDILQHDA 115
ID +A + AY+ + S F + DI N + + Q NV ++ QH A
Sbjct: 416 IDMFNAMNAAYNTHMASSYFNAYDIRNISKVVQWNVEEVFQHSA 459
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 36 KLALMVTVGMALKKLYDSYGVGVGLQNHPYLYSQ-YPI 72
+ L +T G AL+KL+ YGV V L H + Y + +P+
Sbjct: 370 RTGLPLTHGYALEKLFYEYGVDVELWAHEHSYERLWPV 407
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 36 KLALMVTVGMALKKLYDSYGVGVGLQNHPYLYSQ-YPI 72
+ L +T G AL+KL+ YGV V L H + Y + +P+
Sbjct: 257 RTGLPLTHGYALEKLFYEYGVDVELWAHEHSYERLWPV 294
>Z82285-2|CAD56248.1| 622|Caenorhabditis elegans Hypothetical
protein T28F3.1b protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 49 KLYDSYGVGVGLQNHPYLYSQYPIDFPSASSHAYSMNGVSPQF----ASPDIYNPT 100
K ++++G G L N + + +P+D +S + GV + ++ +Y PT
Sbjct: 375 KTFEAFGFGAKLPNQSSVSAIFPLDLQRGTSEVVGITGVMTAYRHALSNVQLYGPT 430
>Z82285-1|CAB05302.1| 634|Caenorhabditis elegans Hypothetical
protein T28F3.1a protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 49 KLYDSYGVGVGLQNHPYLYSQYPIDFPSASSHAYSMNGVSPQF----ASPDIYNPT 100
K ++++G G L N + + +P+D +S + GV + ++ +Y PT
Sbjct: 387 KTFEAFGFGAKLPNQSSVSAIFPLDLQRGTSEVVGITGVMTAYRHALSNVQLYGPT 442
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 8 LFGMKSAGAVIFAFTVVAVLTIKAFIASK--LALMVTVGMALKKLYDSYGVGVGLQNHPY 65
++G+ G VIF+ + + L + + S + V + L S + L P+
Sbjct: 368 VYGLSVLGPVIFSPNIFSPLILNPSVLSPWIFSPAVPLPFILSPYLLSPYIFSPLVMAPF 427
Query: 66 LYSQYPIDFPSASSHAYSMNGVSPQFASPDIYNPTGLG 103
+ + Y + + + S +SP F PD+++P LG
Sbjct: 428 ILNPYVLSPNIFNPYVLSPLVLSPLFLCPDVFSPMVLG 465
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 67 YSQYPIDFPSASSHAYSMNGVSPQFASP--DIYNPTGLGQSNVHDILQHDANAQPSQQAP 124
Y YP ++ S G S AS D+ +P L + H + HD++A S AP
Sbjct: 1107 YVMYPSGPSTSVGSQLSPGGASVSSASSSNDVGSPHPLPLHHEHPLTSHDSSAASSSTAP 1166
Query: 125 T 125
+
Sbjct: 1167 S 1167
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 67 YSQYPIDFPSASSHAYSMNGVSPQFASP--DIYNPTGLGQSNVHDILQHDANAQPSQQAP 124
Y YP ++ S G S AS D+ +P L + H + HD++A S AP
Sbjct: 1107 YVMYPSGPSTSVGSQLSPGGASVSSASSSNDVGSPHPLPLHHEHPLTSHDSSAASSSTAP 1166
Query: 125 T 125
+
Sbjct: 1167 S 1167
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,840,964
Number of Sequences: 27539
Number of extensions: 275331
Number of successful extensions: 723
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 14
length of query: 303
length of database: 12,573,161
effective HSP length: 81
effective length of query: 222
effective length of database: 10,342,502
effective search space: 2296035444
effective search space used: 2296035444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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