Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000014-TA|BGIBMGA000014-PA|undefined
         (117 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   0.69 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   2.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   2.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   6.5  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 0.69
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 50  IFDLITIEPLATRQARSSQ 68
           IF+L+T+EP+ T +    Q
Sbjct: 268 IFELVTVEPILTERPSDRQ 286


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 15  DVRAIVELDCNDNATCIEQIPKQLIVNLRQKKAVKI 50
           +V  I+  DC  N+T + + P +++  +R   A  I
Sbjct: 296 EVATILVDDCGCNSTMLNENPARVMACMRSVDAKTI 331


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 15  DVRAIVELDCNDNATCIEQIPKQLIVNLRQKKAVKI 50
           +V  I+  DC  N+T + + P +++  +R   A  I
Sbjct: 296 EVATILVDDCGCNSTMLNENPARVMACMRSVDAKTI 331


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 8   LAFVLVGDVRAIVELDCNDNA 28
           +A++LVG ++ I     ND+A
Sbjct: 213 VAYLLVGSLKGIARQFYNDDA 233


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.137    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,422
Number of Sequences: 429
Number of extensions: 865
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 117
length of database: 140,377
effective HSP length: 51
effective length of query: 66
effective length of database: 118,498
effective search space:  7820868
effective search space used:  7820868
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)