GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000014-TA|BGIBMGA000014-PA|undefined
         (117 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   2.1  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   3.8  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    22   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   8.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   8.7  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 59  LATRQARSSQDLWTR 73
           L  + ARS+ DLWTR
Sbjct: 281 LKNQPARSADDLWTR 295


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)

Query: 48  VKIFDLITIEPLATRQ 63
           + I++L+T+EPL  RQ
Sbjct: 551 ILIYNLVTLEPLMYRQ 566


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)

Query: 64  ARSSQDLWTR 73
           ARS+ DLWTR
Sbjct: 214 ARSADDLWTR 223


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 77   NHAVSFDLLDYTFQITPREDNT 98
            +H V FD +D+  +  P+E+ T
Sbjct: 1077 SHKVLFDGIDWNMERIPQEELT 1098


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 77   NHAVSFDLLDYTFQITPREDNT 98
            +H V FD +D+  +  P+E+ T
Sbjct: 1078 SHKVLFDGIDWNMERIPQEELT 1099


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.137    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,557
Number of Sequences: 2123
Number of extensions: 3590
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 117
length of database: 516,269
effective HSP length: 56
effective length of query: 61
effective length of database: 397,381
effective search space: 24240241
effective search space used: 24240241
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 43 (21.4 bits)