Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000014-TA|BGIBMGA000014-PA|undefined
(117 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 30 0.66
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 30 0.66
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 30 0.66
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 30 0.66
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 30 0.66
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 30 0.66
BT001278-1|AAN71034.1| 729|Drosophila melanogaster AT07729p pro... 29 1.2
AE013599-3551|AAF46962.2| 729|Drosophila melanogaster CG12192-P... 29 1.2
AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p pro... 29 2.0
AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE... 29 2.0
AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD... 29 2.0
AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC... 29 2.0
AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB... 29 2.0
AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA... 29 2.0
AY119041-1|AAM50901.1| 393|Drosophila melanogaster LP06455p pro... 27 6.1
AE014297-416|AAF51905.3| 393|Drosophila melanogaster CG10303-PA... 27 6.1
AY118932-1|AAM50792.1| 344|Drosophila melanogaster LD24340p pro... 27 8.1
AE014298-2013|AAF48356.2| 344|Drosophila melanogaster CG11674-P... 27 8.1
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p
protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 49 KIFDLITIEPLATRQARSSQDLWTRFLENH 78
+IF + I P T + R S ++W R LE+H
Sbjct: 247 QIFSYLLIHPAITSEDRRSLNIWLRHLEDH 276
>BT001278-1|AAN71034.1| 729|Drosophila melanogaster AT07729p
protein.
Length = 729
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 43 RQKKAVKIFDLITI---EPLATRQARSSQDLWTRFLENHAVSFDLLDYTFQITPREDNTN 99
R+++ K D+IT+ + L + R DL T+FLE+H F DYTF E+ +N
Sbjct: 245 RKEENSKNLDIITVPSADSLIVHELRLKVDL-TKFLEHHKFRF---DYTFD----EECSN 296
Query: 100 ALNFE 104
AL ++
Sbjct: 297 ALVYD 301
>AE013599-3551|AAF46962.2| 729|Drosophila melanogaster CG12192-PA
protein.
Length = 729
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 43 RQKKAVKIFDLITI---EPLATRQARSSQDLWTRFLENHAVSFDLLDYTFQITPREDNTN 99
R+++ K D+IT+ + L + R DL T+FLE+H F DYTF E+ +N
Sbjct: 245 RKEENSKNLDIITVPSADSLIVHELRLKVDL-TKFLEHHKFRF---DYTFD----EECSN 296
Query: 100 ALNFE 104
AL ++
Sbjct: 297 ALVYD 301
>AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p
protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE,
isoform E protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD,
isoform D protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC,
isoform C protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB,
isoform B protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA,
isoform A protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 8 LAFVLVGDVRAIVELDCNDNATCIEQIP-KQLIVNLRQKKAVKIFDLITIEPLATRQARS 66
L FV + D +A+ D + C+ + P + VN +K + + + + L + RS
Sbjct: 263 LEFVPLLDGQAV---DDHQITVCVRKRPISRKEVN---RKEIDVISVPRKDMLIVHEPRS 316
Query: 67 SQDLWTRFLENHAVSFD 83
DL T+FLENH FD
Sbjct: 317 KVDL-TKFLENHKFRFD 332
>AY119041-1|AAM50901.1| 393|Drosophila melanogaster LP06455p
protein.
Length = 393
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/100 (20%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 24 CNDNATCIEQIPKQLIVNLRQKKAVK--IFDLITIEPL-ATRQAR--SSQDL--WTRFLE 76
C +NA+C+ + L+ + R+ + +K +FDL+ + L A+R+ + + + L + F+
Sbjct: 61 CANNASCLYGVANGLMASYRRGETLKLGLFDLVKLPELDASRKHKWGTGRGLSGFMDFVT 120
Query: 77 NHAVSFDLLDYTFQITPREDNTNALNFEVFESRTAKGEQL 116
+A+ + F + ED+++ + + + ++ +L
Sbjct: 121 ENAIRVPVGPMVFSVQRAEDDSDYIEVALLKKTSSSTGRL 160
>AE014297-416|AAF51905.3| 393|Drosophila melanogaster CG10303-PA
protein.
Length = 393
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/100 (20%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 24 CNDNATCIEQIPKQLIVNLRQKKAVK--IFDLITIEPL-ATRQAR--SSQDL--WTRFLE 76
C +NA+C+ + L+ + R+ + +K +FDL+ + L A+R+ + + + L + F+
Sbjct: 61 CANNASCLYGVANGLMASYRRGETLKLGLFDLVKLPELDASRKHKWGTGRGLSGFMDFVT 120
Query: 77 NHAVSFDLLDYTFQITPREDNTNALNFEVFESRTAKGEQL 116
+A+ + F + ED+++ + + + ++ +L
Sbjct: 121 ENAIRVPVGPMVFSVQRAEDDSDYIEVALLKKTSSSTGRL 160
>AY118932-1|AAM50792.1| 344|Drosophila melanogaster LD24340p
protein.
Length = 344
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 4 LVLLLAFVLVGDVRAIVELDCNDNATCIE 32
L+LL F+ G ++EL C+ +A C +
Sbjct: 9 LLLLAGFLATGRAEDLLELSCSSDAQCAQ 37
>AE014298-2013|AAF48356.2| 344|Drosophila melanogaster CG11674-PA
protein.
Length = 344
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 4 LVLLLAFVLVGDVRAIVELDCNDNATCIE 32
L+LL F+ G ++EL C+ +A C +
Sbjct: 9 LLLLAGFLATGRAEDLLELSCSSDAQCAQ 37
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.324 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,078,863
Number of Sequences: 52641
Number of extensions: 173313
Number of successful extensions: 513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 505
Number of HSP's gapped (non-prelim): 18
length of query: 117
length of database: 24,830,863
effective HSP length: 76
effective length of query: 41
effective length of database: 20,830,147
effective search space: 854036027
effective search space used: 854036027
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 56 (26.6 bits)
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