GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000013-TA|BGIBMGA000013-PA|IPR012464|Protein of unknown
function DUF1676
         (239 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    24   4.6  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    24   4.6  
AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.    23   6.0  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   8.0  

>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 16  NNDEDVFRSVMGVLKTCSDDNVALCLKEKALRYVENVSNSRELN 59
           +N E VF+ ++GVLK    D       +K     E V  S + N
Sbjct: 72  DNGELVFQELLGVLKMVDPDGDHAGSMKKCNAEAEKVDTSSKAN 115


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 16  NNDEDVFRSVMGVLKTCSDDNVALCLKEKALRYVENVSNSRELN 59
           +N E VF+ ++GVLK    D       +K     E V  S + N
Sbjct: 72  DNGELVFQELLGVLKMVDPDGDHAGSMKKCNAEAEKVDTSSKAN 115


>AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 16  NNDEDVFRSVMGVLKTCSDDNVALCLKEKALRYVENVSNSRELN 59
           +N E VF+ ++GVLK    D       +K     E V  S + N
Sbjct: 72  DNGELVFQELLGVLKMVDPDGDHAGSMKKCNGEAEKVDTSSKAN 115


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 59  NLIDGVSLIGQGSPRSARSFEPLPDEPRARENQVDLRLLDGVAD 102
           N ID  SL G  SP  + S   L         +V L+ LDG+ D
Sbjct: 206 NCID--SLAGSASPNDSSSNRTLTSSWELYFTKVVLKELDGIDD 247


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.136    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,435
Number of Sequences: 2123
Number of extensions: 4242
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 239
length of database: 516,269
effective HSP length: 62
effective length of query: 177
effective length of database: 384,643
effective search space: 68081811
effective search space used: 68081811
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)