GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000010-TA|BGIBMGA000010-PA|IPR012464|Protein of unknown
function DUF1676
         (240 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.86 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   0.86 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   0.86 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 194 ASKHTETSYEVVAHPHHEEHYASSGHGWG 222
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 194 ASKHTETSYEVVAHPHHEEHYASSGHGWG 222
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 194 ASKHTETSYEVVAHPHHEEHYASSGHGWG 222
           +S+H + +++   H HH +H    G G G
Sbjct: 224 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 252


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 104  DGVADFLENYVVQFKLPSSAVEGMRRSLDEAR 135
            + +A+F+    + F+  + A EG+ RS+ +A+
Sbjct: 988  ESMANFMRKGSLNFQTRNRATEGIGRSIQKAK 1019


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,232
Number of Sequences: 2123
Number of extensions: 5840
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 5
length of query: 240
length of database: 516,269
effective HSP length: 62
effective length of query: 178
effective length of database: 384,643
effective search space: 68466454
effective search space used: 68466454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)