GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000008-TA|BGIBMGA000008-PA|IPR012464|Protein of unknown
function DUF1676
         (253 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    27   0.52 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.5  

>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 201 IVKHPQVSQSHTYSSSHYGGDFDSTGPG 228
           +V  P +  + TY+S+ +GG  D T  G
Sbjct: 200 VVADPNLPVTSTYTSNRFGGTVDETSTG 227


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 54  DRAARLESLPIADGVTLVRRPEAERAFPSSSPEGDLNSLSSDQVDKYLQDATS---KLMQ 110
           +R AR  S P        +  E ++AF SSS + D    + D+  + + + T+   K++Q
Sbjct: 840 ERVARTHSDPEKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQ 899

Query: 111 T 111
           T
Sbjct: 900 T 900


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 194  HEKTTYEIVKHPQVSQSHTYSSSHYGG 220
            H++   +    PQ+SQS  +SSS +GG
Sbjct: 1325 HQQHQLQHHHQPQLSQSSHHSSSSHGG 1351


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 64   IADGVTLVRRPEAERAFPSSSPEGDLNSLSSDQVDKYLQDATSKLMQTHRVVIAPQTFGE 123
            I +   L++R E E  + +S    D    +    DKY ++A+       +   A +    
Sbjct: 1412 IVNSRDLLQRAE-EALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTAR 1470

Query: 124  DVGRSINEARGKLKK 138
            D+    ++  G+L K
Sbjct: 1471 DLHHEADQLNGRLAK 1485


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,163
Number of Sequences: 2123
Number of extensions: 6409
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 253
length of database: 516,269
effective HSP length: 63
effective length of query: 190
effective length of database: 382,520
effective search space: 72678800
effective search space used: 72678800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)