GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000007-TA|BGIBMGA000007-PA|undefined
         (92 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   1.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   1.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   3.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   4.4  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 67 DKIAESTMALDNPFSIRFYEDRCTVQ 92
          D+I  S   L+N F     E RCT +
Sbjct: 35 DEILHSDRLLNNYFKCLMDEGRCTAE 60


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
          protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 67 DKIAESTMALDNPFSIRFYEDRCTVQ 92
          D+I  S   L+N F     E RCT +
Sbjct: 35 DEILHSDRLLNNYFKCLMDEGRCTAE 60


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 67 DKIAESTMALDNPFSIRFYEDRCTVQ 92
          D+I  S   L+N F     E RCT +
Sbjct: 35 DEILHSDRLLNNYFKCLMDEGRCTAE 60


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 39  NNHNPTDYITKGVRKMIGRIYSVSDRVRDKIAE 71
           N+ N T+Y  K     I   Y+V  + RD + E
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 39  NNHNPTDYITKGVRKMIGRIYSVSDRVRDKIAE 71
           N+ N T+Y  K     I   Y+V  + RD + E
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase
          protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 42 NPTDYITKGVRKMIGRIYSVSDR-VRDKIA 70
          N  D   K +RK    I+S+SD  V  K+A
Sbjct: 4  NNQDTFCKKMRKATKEIHSISDSLVNAKLA 33


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.329    0.139    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,904
Number of Sequences: 429
Number of extensions: 721
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 92
length of database: 140,377
effective HSP length: 48
effective length of query: 44
effective length of database: 119,785
effective search space:  5270540
effective search space used:  5270540
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.9 bits)
S2: 38 (19.4 bits)