Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000004-TA|BGIBMGA000004-PA|IPR001128|Cytochrome P450,
IPR002401|E-class P450, group I
(311 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 77 2e-15
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 52 1e-07
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 29 1.1
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 2.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 6.0
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 26 7.9
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 26 7.9
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 77.4 bits (182), Expect = 2e-15
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 80 FLQEHDAASDKPTDIILETCGGAFSDKDVREEVDNIIFAGHDTISTVLTTALSLLGSHPD 139
+ E+ ++KP+ +I E FSD+++ + +FA D S+ +T LL HPD
Sbjct: 286 YKSENKEGAEKPSVLIRE-----FSDEEISLTFLSFLFASQDATSSAMTWLFQLLADHPD 340
Query: 140 VQDKVYNEVRRV-LGDAERDVTKEDYLRLEYLEAVLKESMRMY-PVAPVIARYSDAEVKL 197
V KV E R+ GD + ++ + ++ Y AV+KE +R+ PV V R A
Sbjct: 341 VLQKVREEQLRIRKGDIDVPLSLDLMEKMTYTRAVVKECLRLRPPVLMVPYRVKKAFPIT 400
Query: 198 KNYTAPAGSGFILLLWG-VHQHRIWGADADQFRPERWL-EAATLPDPSFFAGFSTGRRSC 255
+YT P + I L+G +H +++ + + F P+RW P + F G C
Sbjct: 401 PDYTVPKDAMVIPTLYGALHDSKVY-PEPETFNPDRWAPNGLAEQSPKNWMVFGNGPHVC 459
Query: 256 IGKVYAM 262
+G+ YA+
Sbjct: 460 LGQRYAV 466
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 51.6 bits (118), Expect = 1e-07
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 26/229 (11%)
Query: 73 LQQRKSVFLQEHDAASDKP-TDII--LETC----GGAFSDKDVREEVDNIIFAGHDTIST 125
+Q+ +++ ++++ P TD+I L +C G + ++ + ++ AG T +
Sbjct: 236 MQKTYLKIIKDRRSSTENPGTDMIWTLMSCKYRDGRPLKEHEIAGMMIALLMAGQHTSAA 295
Query: 126 VLTTALSLLGSHPDVQDKVYNEVRRVLGDAERDVTKEDYLRLEYLEAVLKESMRMYPVAP 185
+ L+LLGS P++ + ++ E +RV+G+ ++ + Y + L V++E++R++P
Sbjct: 296 TIVWVLALLGSKPEIIEMLWEEQKRVVGE-NLELKFDQYKDMPLLNYVIQETLRLHPPIH 354
Query: 186 VIAR--YSDAEVKLKNYTAPAGSGFILLLWGVHQHRIWGADADQFRPERWLE-------- 235
R D V PA + + + A F P+RW +
Sbjct: 355 SHMRKVKRDLPVPGSKIVIPANNYLLAAPGLTATEEEYFTHATDFDPKRWNDRVNEDENA 414
Query: 236 --------AATLPDPSFFAGFSTGRRSCIGKVYAMMSMKTTLSFLLRRY 276
T S + F GR CIG+ +A M + T +S + Y
Sbjct: 415 EQIDYGYGLVTKGAASPYLPFGAGRHRCIGEQFAYMHLSTIISKFVHDY 463
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 114 NIIFAGHDTISTVLTTALSLLGSHPDVQDKVYNEVRRVLGDAERDVTKEDYLRLEYLEAV 173
N++ + D++ L T L L D ++ + V ++RD+ K++ L + Y++
Sbjct: 172 NLVTSSFDSLGMCLDTILCRLNHSCDPNCQIIFDGAIVQLVSKRDIKKDEQLFISYIDIR 231
Query: 174 LKESMR 179
L +S+R
Sbjct: 232 LPKSIR 237
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 31 FAVLTERFQKFWLHYDFVYNRTKLKERED-QIIKVLHNMSNTALQQRKSVFLQ-EHDAAS 88
F V E+ +K + Y R L+ + + KVL ++S++ ++QR SV + E D
Sbjct: 231 FLVKKEKTKKQLEEEEHGYERFLLESAQSKEARKVLEDLSSSYVKQRPSVLVNTEDDENG 290
Query: 89 DKPTD 93
KP+D
Sbjct: 291 IKPSD 295
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 6.0
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 70 NTALQQRKSVFLQEH-DAASDKPTDIILETCGGAFSDKDVREEVDNIIFAGHDTISTVLT 128
NT L ++ +F Q+ + +SD ILET + + + E + A ++ S+ L
Sbjct: 240 NTELNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTALWESKSSELQ 299
Query: 129 TALSLLGSHPDVQDKVYNEVRRVLGDAERD-VTKEDYLR 166
+ ++ L Q +YN V L + ++ + E+ LR
Sbjct: 300 SEVAALQEKLTSQQSLYNNVTEELNNNKQQLLISENSLR 338
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 116 IFAGHDTISTVLTTALSLLGSHPDVQDKVYNEVRRVLGDAERDVTKE 162
+ + H +S +L T + +GSH D + +E + L DAE V +E
Sbjct: 236 VVSSHPRLSGLLDTINAAIGSHVDFNPNLRDE--QWLRDAETAVVEE 280
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 LLGSHPDVQDKVYNE 147
L SHPDV DK+Y E
Sbjct: 38 LKSSHPDVYDKLYGE 52
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,386,755
Number of Sequences: 5004
Number of extensions: 56388
Number of successful extensions: 151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 144
Number of HSP's gapped (non-prelim): 8
length of query: 311
length of database: 2,362,478
effective HSP length: 73
effective length of query: 238
effective length of database: 1,997,186
effective search space: 475330268
effective search space used: 475330268
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -