Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000002-TA|BGIBMGA000002-PA|undefined
(1124 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zi... 45 2e-04
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 43 0.001
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 42 0.002
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 38 0.029
At3g48860.2 68416.m05337 expressed protein 38 0.038
At3g48860.1 68416.m05336 expressed protein 38 0.038
At1g29560.1 68414.m03615 expressed protein ; expression supporte... 38 0.038
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 35 0.27
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 34 0.62
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 34 0.62
At5g22040.1 68418.m02566 expressed protein 33 1.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 33 1.1
At5g50840.2 68418.m06299 expressed protein 33 1.4
At5g50840.1 68418.m06298 expressed protein 33 1.4
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 33 1.4
At1g75060.1 68414.m08718 expressed protein ; expression supporte... 33 1.4
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 32 1.9
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 32 2.5
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 32 2.5
At5g22950.1 68418.m02683 SNF7 family protein contains Pfam domai... 31 3.3
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 31 3.3
At1g67230.1 68414.m07652 expressed protein 31 3.3
At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 31 3.3
At4g27595.1 68417.m03964 protein transport protein-related low s... 31 4.3
At3g49540.1 68416.m05414 expressed protein 31 4.3
At3g22790.1 68416.m02873 kinase interacting family protein simil... 31 4.3
At3g61270.1 68416.m06857 expressed protein 31 5.7
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 31 5.7
At1g13120.1 68414.m01521 expressed protein contains Prosite PS00... 31 5.7
At5g55820.1 68418.m06956 expressed protein 30 7.6
At4g31570.1 68417.m04483 expressed protein 30 7.6
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 7.6
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 30 7.6
>At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 970 RQRAEHEETLRQRVLQKEIEAKARLNK-LIAEKVAAEKLVLAAQLAEMRSKLNVVEEKLN 1028
R++ + +E++ + V + + + + LNK L+ EK K L ++ E++ KL V++ L
Sbjct: 375 REQKKADESVLRLVEEHQRQKEDALNKILLLEKQLDTKQTLEMEIQELKGKLQVMKH-LG 433
Query: 1029 GEDDEFVRTVLKSIPDYVRDEGIELESV 1056
+DDE V+T +K + D + D+ ELE +
Sbjct: 434 DDDDEAVQTKMKEMNDELDDKKAELEDL 461
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 970 RQRAEHEETLRQRVLQKEIEAKARLNK-LIAEKVAAEKLVLAAQLAEMRSKLNVVEEKLN 1028
R++ + +E++ + V + + + + LNK L+ EK K L ++ E++ KL V++ L
Sbjct: 374 REQKKADESVLRLVEEHQRQKEDALNKILLLEKQLDTKQTLEMEIQELKGKLQVMKH-LG 432
Query: 1029 GEDDEFVRTVLKSIPDYVRDEGIELESV 1056
+DDE V+ +K + D + D+ ELE +
Sbjct: 433 DDDDEAVQKKMKEMNDELDDKKAELEGL 460
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 42.3 bits (95), Expect = 0.002
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 27/267 (10%)
Query: 812 DACAYYNKLVEE--TMLDFSMSSLGELRHAMLERQDLVKTSVDNANYAVSRLDELTRYFE 869
D A N EE ++ + EL+ A + Q+LV ++ + + +EL+ + E
Sbjct: 503 DLSASLNAAEEEKKSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVE 562
Query: 870 CGVQAPKESLDNTKAL---LKDYRDKIQTTSANYQWENDRSLAMDKQWQMVGEVVEKYSA 926
++S K L ++ ++++ + N + + +Q + +++ +
Sbjct: 563 VHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAES 622
Query: 927 ETQQMFPAPRR-----GQTDTDLLLI------HATRYSEELRA------ANEHMISECLK 969
Q++ R + D +L + H S +LR ++EH + E +
Sbjct: 623 TIQELSSESERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESSEHRVLELSE 682
Query: 970 RQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQLAEMRSKLNVVEEKLNG 1029
+A EE+ E + +++ +++ A+ L QLAE SKL ++ EK
Sbjct: 683 SLKAAEEESRTMSTKISETSDELERTQIMVQELTADSSKLKEQLAEKESKLFLLTEK--- 739
Query: 1030 EDDEFVRTVLKSIPDYVRDEGIELESV 1056
D + +K + V +ELESV
Sbjct: 740 --DSKSQVQIKELEATVATLELELESV 764
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 38.3 bits (85), Expect = 0.029
Identities = 39/207 (18%), Positives = 83/207 (40%), Gaps = 6/207 (2%)
Query: 820 LVEETMLDFSMSSLGELRHAMLERQDLVKTSVDNANYAVSRLDELTRYFECGVQAPKESL 879
LV++T L + L +L+ + + + + ++ ++ +DELTR E A ES
Sbjct: 62 LVKQTELHLAQKELNKLKEQLKNAETIREQALSELEWSKRTVDELTRKLE----AVNESR 117
Query: 880 DNTKALLKDYRDKIQTTSANYQWENDRSLAMDKQWQMVGEVVEKYSAETQQMFPAPRRGQ 939
D+ + + I+ S A + + GEV ++ Q++ +
Sbjct: 118 DSANKATEAAKSLIEEAKPGNVSVASSSDAQTRDMEEYGEVCKELDTAKQELRKIRQVSN 177
Query: 940 TDTDLLLIHATRYSEELRAANEHMIS-ECLKRQRAEHEETLRQRVLQKEIEAKARLNKLI 998
+ + ++ E + + H E L+++ A E++ Q L +A+ +++
Sbjct: 178 EILETKTVALSKVEEAKKVSKVHSEKIELLRKEIAAVNESVEQTKLACS-QARKEQSEIF 236
Query: 999 AEKVAAEKLVLAAQLAEMRSKLNVVEE 1025
AEK +K A + L + E
Sbjct: 237 AEKEIQQKSYKAGMEESAKKSLALKNE 263
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 37.9 bits (84), Expect = 0.038
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 974 EHEETLRQ--RVLQKEIEAKARLNKL------IAEKVAAEKLVLAAQLAEMRSK---LNV 1022
E+E L + R +K +EA+AR +L + E V+ E +L+ + A +R + LNV
Sbjct: 227 ENENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNV 286
Query: 1023 VEEKLNGEDDEFVRTVLKSIPDYVRDEGIELESVLRKKYYEASS 1066
++K +G+D+E V L+S + ++DE L++ EA S
Sbjct: 287 AKQKKSGKDEEIVS--LRSELENLKDEATTAAERLQEAESEAKS 328
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 37.9 bits (84), Expect = 0.038
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 974 EHEETLRQ--RVLQKEIEAKARLNKL------IAEKVAAEKLVLAAQLAEMRSK---LNV 1022
E+E L + R +K +EA+AR +L + E V+ E +L+ + A +R + LNV
Sbjct: 227 ENENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNV 286
Query: 1023 VEEKLNGEDDEFVRTVLKSIPDYVRDEGIELESVLRKKYYEASS 1066
++K +G+D+E V L+S + ++DE L++ EA S
Sbjct: 287 AKQKKSGKDEEIVS--LRSELENLKDEATTAAERLQEAESEAKS 328
>At1g29560.1 68414.m03615 expressed protein ; expression supported by
MPSS
Length = 521
Score = 37.9 bits (84), Expect = 0.038
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 951 RYSEELRAANEHMISECLKRQRAEH-EETLRQRVLQ----KEIEAKARLNKLIAEKVAAE 1005
R+ ELR E M++ L++QR EH + L +R +Q KE+E + R + + ++++ A+
Sbjct: 341 RHDTELRLEREKMVNRELEKQRIEHLIDPLVRRYMQAKRDKEVEQRERAS-IESQRIVAQ 399
Query: 1006 KLVLAAQLAEMRSKLNV 1022
+++ +L MR NV
Sbjct: 400 EILRQQRLQGMRENQNV 416
Score = 31.9 bits (69), Expect = 2.5
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 929 QQMFPAPRRGQTDTDLLLIHATRYSEELRAANEHMISECLKRQRAEH-EETLRQRVLQ-- 985
QQ R Q + D + R+ ELR E M++ L++QR E L +R +Q
Sbjct: 404 QQRLQGMRENQ-NVDSRMHDPRRHDTELRLEREKMVNRELEKQRIEPLIGPLVRRYMQAK 462
Query: 986 --KEIEAKARLNKLIAEKVAAEKLVLAAQLAEMRSKLNV 1022
KE+E + R + + ++++ A++ + +L MR NV
Sbjct: 463 RDKEVEQRERAS-IESQRIVAQENLRQQRLQGMRENQNV 500
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 35.1 bits (77), Expect = 0.27
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 954 EELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQL 1013
EE + + + +E ++ Q+ EHE V +K +E K R +K AA+K+++
Sbjct: 615 EERKCLEKRIEAEEIEMQKFEHEMV---EVERKMLELKRRAEVAKEKKEAADKMIV---- 667
Query: 1014 AEMRSKLNVVEEKLNGEDDEFVRTVL 1039
EM+S +++++ + EF+ +VL
Sbjct: 668 -EMKSSAETIDQEIANVELEFITSVL 692
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 33.9 bits (74), Expect = 0.62
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Query: 877 ESLDNTKALLKDYRDKIQTTSANYQWENDRSLAMDKQWQMVGEVVEKYSAETQQMFPAPR 936
++++ K + K+ T + ++ N L ++ +Q E ++K Q+ +
Sbjct: 179 QTIEKNKQRKQQLEQKVDETLESLEFHN---LMLNNSYQ---EEIQKMEKNMQEFYQQVL 232
Query: 937 RGQTDTDLLL-IHATRYSEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLN 995
G + L + E R + I + ++ E + Q+ + ++ EA
Sbjct: 233 GGHEKSFAELEAKREKLDERARLIEQRAIKNEEEMEKTRLEREMIQKAMCEQNEANEEAM 292
Query: 996 KLIAEKVAAEKLVLAAQLAEMRSKLNVVEE 1025
KL AEK EK L ++ EM +KLN +E
Sbjct: 293 KL-AEKHQKEKEKLHKRIMEMEAKLNETQE 321
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 33.9 bits (74), Expect = 0.62
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 963 MISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQLAEMRSKLNV 1022
++S + QR +HE ++ K + K IAE A + +LA++L +++ L
Sbjct: 159 LLSTTEELQRVKHELSMTADAKNKALSHAEEATK-IAEIHAEKAEILASELGRLKALLGS 217
Query: 1023 VEEKLNGEDDEFVRTVLKSIPDYVRDEGIELESVLRKKYYE 1063
EEK E +E V + LKS + +R E +E S+L E
Sbjct: 218 KEEKEAIEGNEIV-SKLKSEIELLRGE-LEKVSILESSLKE 256
>At5g22040.1 68418.m02566 expressed protein
Length = 284
Score = 33.1 bits (72), Expect = 1.1
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 830 MSSLGELRHAMLERQDLVKTSVDNANYAVSRLDELTRYFECGV-QAPKESLDNTKALLKD 888
M G A + Q+ KT DN N V + L + F + + K+ ++ A +
Sbjct: 94 MEKQGSDPRAQPQHQENPKTGYDN-NRGVQTFEGLEQKFMDDITRLAKDQIEAEDAEIAR 152
Query: 889 YRDKIQTTSANYQWENDRSLAMDKQWQMVGEVVEKYSAETQQMFPAPRRGQTD 941
+R+KI T +A Y E + + E++ K S QQ F G D
Sbjct: 153 HREKINTINARY--EEQLATLRARHTGKREEIMRKESLARQQQFKQQTMGMMD 203
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 1000 EKVAAEKLVLAAQLAEMRSKLNVVEEKLNGEDDEFVRTVLKSIPDYVRDEGIELESVLRK 1059
EKV +E L ++LAE ++ L +VE+ L+ +D R ++ E ELE L+K
Sbjct: 860 EKVKSEVDALTSKLAETQTALKLVEDALSTAEDNISRLTEENRNVQAAKENAELE--LQK 917
Query: 1060 KYYEASS 1066
+ASS
Sbjct: 918 AVADASS 924
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 951 RYSEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNK-LIAEKVAAEKLVL 1009
R +E A + ++ L + + E ++ +KE+E +K L+ E+ A E L+
Sbjct: 1368 RLTEASVALEKAVLERDLNQTKVSSSEAKEEKWHEKEVELSTLYDKLLVQEQEAKENLIP 1427
Query: 1010 AAQLAEMRSKLNVVE 1024
A+ + + K+N +E
Sbjct: 1428 ASDMRTLFDKINGIE 1442
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 953 SEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEA---KARLNKLIAEKVAAEKLVL 1009
+E LR +H+ + + ++ +HE+ L+Q+ L+ +I A K KLI E+ ++ V
Sbjct: 226 NEMLRTKLKHLADQFMLSEQ-QHEQRLKQKTLELQISALKIKQHEEKLIHEQ--SQMKVY 282
Query: 1010 AAQLAEMRSKLNVVEEKLNGEDDEF 1034
A Q++++ S + +L + D+F
Sbjct: 283 ADQVSQLLSTEKNLRLQLTSDGDKF 307
>At5g50840.1 68418.m06298 expressed protein
Length = 404
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 953 SEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEA---KARLNKLIAEKVAAEKLVL 1009
+E LR +H+ + + ++ +HE+ L+Q+ L+ +I A K KLI E+ ++ V
Sbjct: 225 NEMLRTKLKHLADQFMLSEQ-QHEQRLKQKTLELQISALKIKQHEEKLIHEQ--SQMKVY 281
Query: 1010 AAQLAEMRSKLNVVEEKLNGEDDEF 1034
A Q++++ S + +L + D+F
Sbjct: 282 ADQVSQLLSTEKNLRLQLTSDGDKF 306
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) similar
to 17.9 kDa heat-shock protein [Helianthus annuus]
GI:11990130; contains Pfam profile PF00011: Hsp20/alpha
crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana] GI:7407073
Length = 366
Score = 32.7 bits (71), Expect = 1.4
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 951 RYSEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARL-NKLIAEKVAAEKLVL 1009
+ EE +A E + + + +A+ E ++ LQ+EIEAK +L + + E+ E+ +
Sbjct: 165 KLQEEAKAKEEAEMRKLQEEAKAKEEAAAKK--LQEEIEAKEKLEERKLEERRLEERKLE 222
Query: 1010 AAQLAEMRSKLNVVEEKLNGEDDEFVRTVLK 1040
+LAE +KL ++E+ + ++ +LK
Sbjct: 223 DMKLAE-EAKLKKIQERKSVDESGEKEKILK 252
>At1g75060.1 68414.m08718 expressed protein ; expression supported by
MPSS
Length = 242
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 914 WQMVGEVVE-KYSAETQQMFPAPRRGQTDTDLLLIHATRYSEELRAANEHMISECLKRQR 972
W ++ +E K + P + D DL + H+T+++ E + ++R
Sbjct: 74 WLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKR 133
Query: 973 AEHEETLRQRVLQKEI--EAKARLNKL---IAEKVAAEKLVLAAQLAEMRSKLNVVEEKL 1027
L Q+ L +E+ ++ ++++ + + KV KL +AA L R N+V+
Sbjct: 134 GHRSSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWR-HFNLVDALP 192
Query: 1028 NGEDDEFVRTVLKSIPDYVRDE 1049
N ++ + + + DE
Sbjct: 193 NPTKEQLIDIIQRHFMSQQMDE 214
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 972 RAEHEETLRQRVLQKEIEAKARLNKL--IAEKVAAEKLVLAAQLAEMRSKLNVVEEKLNG 1029
+AEH T +E + ++R+N L +A E + QL ++ ++ ++ EEK
Sbjct: 167 QAEHLRTQNNIFKTREEKYQSRINVLEALASGTGVEHEIATQQLRQIETEKSMWEEKKKH 226
Query: 1030 EDDEFVRTVLKSIPDYVRDEGIELESVLRKKYYE 1063
E+++ V+ + ++ + ++ E K+ YE
Sbjct: 227 EEEDMVKLMKQNDQHNLEISALKQELETTKRKYE 260
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 941 DTDLLLIHATRYSEELR-----AANEHMISECLKRQ---RAEHEETLRQRVLQKEIEAKA 992
D D L + R +EE R A+E I L++Q R + EE +R+ + +++ E +
Sbjct: 318 DDDALQLERHRKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRK 377
Query: 993 RLNKLIAEKVAAEKLVLAAQLAEMRSK 1019
+L+ EK E+ L Q+ E++ +
Sbjct: 378 EEERLLREKQREEERYLKEQMRELQRR 404
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 1069 PCPGPAVGQRLMAQDVGVSFYEGGESNLIVIELQIRSDWL 1108
PCP P + L D GV F E GE LI I + SD L
Sbjct: 968 PCPIPLQSEHL--SDEGVYFLENGEDGLIYIGESVNSDIL 1005
>At5g22950.1 68418.m02683 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 229
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 956 LRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAA---- 1011
LR + EC +R + +R +QK I+ A+ N +++ K A+++V +
Sbjct: 18 LRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVN 77
Query: 1012 QLAEMRSKLNVVEEKLNGEDDEFVRTV 1038
+L E ++++N + L GE RTV
Sbjct: 78 RLYENKAQMNSISMHL-GESVAIARTV 103
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription factor
(HB-14) identical to homeodomain transcription factor
(ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis thaliana];
Length = 852
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 951 RYSEELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLA 1010
RY+ E A E + +EC K ++ +R+ + IE K + ++ A
Sbjct: 28 RYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 87
Query: 1011 AQLAEMRSKLNVVEEKLNGEDDEFVRTV 1038
A+L + KLN + + L E+D + V
Sbjct: 88 ARLQTVNRKLNAMNKLLMEENDRLQKQV 115
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 31.5 bits (68), Expect = 3.3
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 961 EHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKV-AAEKLVLAAQLAEMRSK 1019
E +S +K +ET VL+K IE KAR + + EK+ A EK+ + + E ++K
Sbjct: 292 EDDVSSRIKDLALREQET---DVLKKSIETKARELQALQEKLEAREKMAVQQLVDEHQAK 348
Query: 1020 LNVVEEKLNGEDDEFVRTVLKSIPDYVRDEGIELE 1054
L+ + + E ++ KSI D ++ + E+E
Sbjct: 349 LDSTQREFELEMEQ----KRKSIDDSLKSKVAEVE 379
>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
domain-containing protein contains Pfam profiles PF00168:
C2 domain; contains PF02893: GRAM domain; similar to
Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B
Length(GI:6980525); similar to Synaptotagmin III (SytIII)
(Swiss-Prot:P40748) [Rattus norvegicus]
Length = 1859
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 963 MISECLKRQRAE----HEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQLAEMRS 1018
M+ E LK QR + +E + + Q +IEA + + K++A+ ++ + E+ +
Sbjct: 637 MLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLIRKETKELEA 696
Query: 1019 KLNVVEEKLNGEDDEFVRTVLKSIPDYVRD 1048
V EE++ G+ + V+ + +I R+
Sbjct: 697 LGKVEEERIKGKAETDVKYYIDNIKRLERE 726
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 998 IAEKVAAEKLVLAAQLAEMRSKLNVVEEKLNGEDDEFVRTVLKSIPDYVRDEGIELESVL 1057
IAE A + +L+++L+ +++ + E+K + EDDE V + LKS + +R + +E S+L
Sbjct: 223 IAENQAEKAEILSSELSRLKALVGSDEQKKSNEDDEVV-SKLKSEIEMLRGK-LEKVSIL 280
>At3g49540.1 68416.m05414 expressed protein
Length = 166
Score = 31.1 bits (67), Expect = 4.3
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 897 SANYQWENDRSLAMDKQWQMVGEVVEKYSAETQQMFPA-PRRGQTDTDLLLIHATRYSEE 955
S N + + + + +KQ Q V E E S E ++ FP P + T + A S
Sbjct: 26 SENVVAKENNTESGEKQNQTVAETTETTSVEAKETFPVEPTKETTPAVQPEVAAVEESSS 85
Query: 956 LRAANEHMIS-ECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQLA 1014
A +++ E ++ E+ E +V + A ++ + + AE + A+
Sbjct: 86 ADAGEAAVVAPEKVENAATENAEA---KVEAVAVAAPEKVEVAVEAEKKAEAEPVKAEAE 142
Query: 1015 EMRSKLNVVEEKLNGEDDEFVRTV 1038
++++ V+E+ E+ E V TV
Sbjct: 143 PVKAEAEPVKEESKQEEKEAVVTV 166
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 31.1 bits (67), Expect = 4.3
Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 2/164 (1%)
Query: 797 TDLADTALNNYGTARDACAY-YNKLVEE-TMLDFSMSSLGELRHAMLERQDLVKTSVDNA 854
T + AL RDA YN+ +++ T L+ S S E + R +T V+N
Sbjct: 218 TKILAEALAKLEAERDAALLRYNESMQKITELEESFSHAQEDVKGLTNRATKAETEVENL 277
Query: 855 NYAVSRLDELTRYFECGVQAPKESLDNTKALLKDYRDKIQTTSANYQWENDRSLAMDKQW 914
A SRL E + N + ++D + Q S D A+ +
Sbjct: 278 KQAHSRLHSEKEAGLAEYNRCLEMISNLEKKVRDAEENAQNFSNQSAKAEDEIKALRHEL 337
Query: 915 QMVGEVVEKYSAETQQMFPAPRRGQTDTDLLLIHATRYSEELRA 958
V EV + QQ + + + +A R S E+ A
Sbjct: 338 VKVNEVKDGLRLRYQQCLETISKLEREVSHAQDNAKRLSSEVLA 381
>At3g61270.1 68416.m06857 expressed protein
Length = 498
Score = 30.7 bits (66), Expect = 5.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 762 FEEGSALSNVENESPCDTLPP--PVVTKDVCEIEKCLTDLADTALNNY 807
F+ S + + ESPC+ LPP P+ K+V E + LT + N Y
Sbjct: 443 FKAESMIISPSEESPCEMLPPYDPLALKEVLERKANLTRQVELWENQY 490
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear division
protein nuf2) (Swiss-Prot:Q10173) [Schizosaccharomyces
pombe]
Length = 974
Score = 30.7 bits (66), Expect = 5.7
Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 20/259 (7%)
Query: 781 PPPVVTKDVCEIEKCLTDLADTALNNYGTARDACAYYNKLVEETMLDFSMSSLGELRHAM 840
P P+ KD+ E T+ +AL NYG +D+ + ++ LG L
Sbjct: 98 PLPISFKDLLRPESSRTEFFISALLNYGLYKDS--------KMDLIRPKAEELGLLDEQR 149
Query: 841 LERQDLVKTSVDNANYAVSRLDELTRYFECGVQAPKESLDNTKALLKDYRDKIQTTSANY 900
+ + V N + DE VQ + +++ + + ++ + A +
Sbjct: 150 KQCEAKVAQLYMQLNAEIGEFDEAVERDLPFVQELEANIEQLNKKILELNNQQMSLRATF 209
Query: 901 QWENDRSLAMDK-----QWQMVGEVVEKYSAETQ-QMFPAPRRGQTDTDLLLIHATRYSE 954
Q ++S MD ++ +V V E + +Q P +G + L++ T+ +E
Sbjct: 210 QKMREKSTQMDNEISKAEFDLVETVQENANLRSQIVQSPDKLQGALEEKKLVLGETKKAE 269
Query: 955 ELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEKLVLAAQLA 1014
+ + L+ E+ + ++KE KA +KL + VA + L
Sbjct: 270 QSAMVTFQEKAAILE----VFEKVTNAKTVEKEF--KALKDKLSEDGVAYKSLEAKVVER 323
Query: 1015 EMRSKLNVVEEKLNGEDDE 1033
E KL + E L + E
Sbjct: 324 ERIGKLEQLNESLKQLEKE 342
>At1g13120.1 68414.m01521 expressed protein contains Prosite PS00012:
Phosphopantetheine attachment site; similar to GLE1
(GI:3288817) {Homo sapiens}; EST gb|N37870 comes from
this gene
Length = 611
Score = 30.7 bits (66), Expect = 5.7
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 880 DNTKALLKDYRDKIQTTSANYQWENDRSLAMDKQWQMVGEVVEKYSAETQQMFPAPRRGQ 939
D+ + D R+++ E + SL+ + + E ++ + +
Sbjct: 139 DHQTEIKDDIRNQVSVVETEIMNEIETSLSAIARVEKYSETRKEVERKLDLQYQRKVAEA 198
Query: 940 TDTDLLLI---HATRYS-EELRAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLN 995
DT L + H + EE + +E E +++RA EE +RQ + E + A++
Sbjct: 199 LDTHLTAVQREHKIKSQIEERKIRSEEAQEEARRKERAHQEEKIRQEKARAEAQMLAKI- 257
Query: 996 KLIAEKVAAEKLVLAAQLAEMR-SKLNVVEEKL 1027
+ EK E+ A ++AE + E+KL
Sbjct: 258 RAEEEKKEVERKA-AREVAEKEVADRKAAEQKL 289
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 30.3 bits (65), Expect = 7.6
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 901 QWENDRSLAMD----KQWQMVGEVVEKYSAETQQMFPAPRRGQTDTDLLLIHATRYSEEL 956
Q ENDR L + ++ + E ++K E ++ ++ + + + EE
Sbjct: 1534 QKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEE 1593
Query: 957 RAANEHMISECLKRQRAEHEETLRQRVLQKEIEAKARLNKLIAEKVAAEK-LVLAAQLAE 1015
R E +++ KRQR E ++ L++ ++ I R + EK+ AEK L A A
Sbjct: 1594 RKRKEFEMAD-RKRQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKELKRQAMDAR 1652
Query: 1016 MRSKLNVVEEKLNGE 1030
++++ + E++ N E
Sbjct: 1653 IKAQKELKEDQNNAE 1667
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.3 bits (65), Expect = 7.6
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 945 LLIHATRYS---EELRAANEHMISECLKRQRAEHE-ETLRQRVLQKEIEAKARLNKLIAE 1000
LL H T+ + E L A E +++ + Q +E E QR+L + + K +
Sbjct: 1315 LLHHKTKIAGLRESLTQAEESLVAVRSELQDKSNELEQSEQRLLSTREKLSIAVTK--GK 1372
Query: 1001 KVAAEKLVLAAQLAEMRSKLNVVEEKLNGEDDEFVRTVLKSIPDYVR-DEGIE-LESVLR 1058
+ ++ + LAE +KL E+LN +D V V K + Y+ E +E LES L
Sbjct: 1373 GLIVQRDNVKQSLAEASAKLQKCSEELNSKDARLVE-VEKKLKTYIEAGERVEALESEL- 1430
Query: 1059 KKYYEASST 1067
Y S+T
Sbjct: 1431 -SYIRNSAT 1438
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 784 VVTKDVCEIEKCLTDLADTALNNYGTARDACAYYNKLVEET--MLDFSMSSLGELRHAML 841
++++ EI++ L + D AL++ ++D A + E++ MLD ++++ LRH +
Sbjct: 386 LISRKEQEIQQ-LNENLDRALDDVNKSKDKVADLTEKYEDSKRMLDIELTTVKNLRHELE 444
Query: 842 ERQDLVKTSVDNANYAVSRLDE 863
+ ++ S D + + LDE
Sbjct: 445 GTKKTLQASRDRVSDLETMLDE 466
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 30.3 bits (65), Expect = 7.6
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 773 NESPCDTLPPPVVTKDVCEIEKCLTD---LADTALNNYGTARDA-CAYYNKLVE--ETML 826
NES CD+ V + C + K L++ + + L ++ T +D+ C Y L+ L
Sbjct: 96 NESICDSHKKKVSSLAYCHVHKKLSEIKHMCEGCLLSFATEKDSDCDTYKSLIGILHKDL 155
Query: 827 DFSMSSLGELRHAMLERQDLVKTSVDNANYAVSRL--DELTRYFEC 870
+ + +L A + +LV+T+ + +Y + + D L ++ C
Sbjct: 156 ELLIDDERDLPLAFKKDDNLVQTTKNLVDYKTNNIKNDSLKQHCSC 201
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,832,147
Number of Sequences: 28952
Number of extensions: 757636
Number of successful extensions: 2375
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2349
Number of HSP's gapped (non-prelim): 56
length of query: 1124
length of database: 12,070,560
effective HSP length: 89
effective length of query: 1035
effective length of database: 9,493,832
effective search space: 9826116120
effective search space used: 9826116120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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