Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
(495 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 38 0.020
At3g42580.1 68416.m04420 Ulp1 protease family protein contains P... 37 0.035
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 36 0.047
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa... 34 0.19
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 32 0.76
At5g17160.1 68418.m02010 expressed protein 32 0.76
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 32 0.76
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 32 0.76
At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (... 32 1.0
At5g40450.1 68418.m04905 expressed protein 31 1.3
At2g18220.1 68415.m02123 expressed protein contains Pfam domain ... 31 1.3
At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof... 31 1.7
At3g02810.1 68416.m00273 protein kinase family protein contains ... 31 1.7
At5g59020.1 68418.m07393 expressed protein 31 2.3
At4g39840.1 68417.m05645 expressed protein 31 2.3
At4g26630.1 68417.m03837 expressed protein 31 2.3
At3g60920.1 68416.m06815 beige/BEACH domain-containing protein c... 31 2.3
At4g12580.1 68417.m01984 expressed protein predicted protein 30 3.1
At2g47220.1 68415.m05897 3' exoribonuclease family domain 1 prot... 30 3.1
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 30 3.1
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 30 4.0
At5g11050.1 68418.m01291 myb family transcription factor contain... 30 4.0
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 30 4.0
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 29 5.3
At2g05642.1 68415.m00603 expressed protein 29 5.3
At1g49870.1 68414.m05591 expressed protein ; expression supporte... 29 5.3
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 7.1
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si... 29 7.1
At5g04190.1 68418.m00407 phytochrome kinase substrate-related co... 29 7.1
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof... 29 7.1
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof... 29 7.1
At4g03830.1 68417.m00534 myosin heavy chain-related 29 9.3
At2g45380.1 68415.m05645 expressed protein similar to gi2344899|... 29 9.3
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 29 9.3
At2g20240.1 68415.m02365 expressed protein 29 9.3
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 29 9.3
At1g17040.1 68414.m02071 transcription factor-related contains P... 29 9.3
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 37.5 bits (83), Expect = 0.020
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 331 DKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNES 390
D+V ENS+ + VLKT N + + D + N T S + + ++ +S +N N S
Sbjct: 249 DEVAENSSDEDEPKVLKTNNSKADKDEDEEENET-SDDEAEPKALKLSNS-NSDNGENNS 306
Query: 391 SDDD----FANVKNKQKKIETFQTSSSDGE 416
SDD+ + + +K+ K T + D E
Sbjct: 307 SDDEKEITISKITSKKIKSNTADEENGDNE 336
>At3g42580.1 68416.m04420 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 903
Score = 36.7 bits (81), Expect = 0.035
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 383 PENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNS 442
P N + SDD+ ++ Q + DGE SA HHT+SD+V +
Sbjct: 380 PSNQKGSFSDDEMKDIAPTQPVPRNVPGNDGDGEVSAK-------KHHTVSDYVMENIYL 432
Query: 443 EESSYCSQSEGGNSDV 458
+S Q GGNS++
Sbjct: 433 GGASPPHQEVGGNSEI 448
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 36.3 bits (80), Expect = 0.047
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 298 LQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEP 357
L+ ++G S+E+ + T +D+++ + T ++ + T +N K + K N P
Sbjct: 263 LERWMAGRPWESSEKEQNTTNNDNSSVKNST--NRNSQGGETAKSSNRNKLNSSTKPNTP 320
Query: 358 DSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC 417
+ T +P R KR IP +++++SSDD+ A + ++ + S SD E
Sbjct: 321 SASSTATRNP-RKKRP--------IPSSIKSKSSDDE-AKSSERNRRPSIARPSVSDDET 370
Query: 418 SASA 421
+S+
Sbjct: 371 LSSS 374
>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
homeodomain proteins;
Length = 575
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 389 ESSDDDFANVKNKQKKIETFQTSSSDGECSASA---PSIALPSHHTMSDWVGQTTNSEES 445
+S ++ ++++ F +S++ S+SA P+ + P +D V T N+ +
Sbjct: 421 QSQRSSSSSWRDERTSTTVFPDNSNNNPSSSSAQQRPNNSSPPRRARNDDVHGTNNN--N 478
Query: 446 SYCSQSEGGNSDVGFHYAADSS 467
SY + GG S VGF Y SS
Sbjct: 479 SYVNSGSGGGSAVGFSYGIGSS 500
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 32.3 bits (70), Expect = 0.76
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 321 SANDVDKTPIDKVEEN-STTTAKANVLKTENDEK-------SNEPDSDVNV--TDSPNRG 370
S +D+D + D EE T KA V K K +E DS+ +V TDS
Sbjct: 139 SVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSDSESDSEASVFETDSDGSS 198
Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSAS 420
+ SS E+ R + K KQ+K + SSS E S S
Sbjct: 199 GESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRKERRRRYSSSSSESSES 248
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 32.3 bits (70), Expect = 0.76
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 295 VKILQARLSGNKIVSNERNEVTA-KDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
+ ++ A NK E NEVTA K +S N + +DK EE + K +ND++
Sbjct: 240 IVVMDANTEANK---EEMNEVTADKKESENSL--VQVDKEEETLQAICEEGPKKNDNDQE 294
Query: 354 SNEPDSDVNVTDSP 367
+ V+V+D P
Sbjct: 295 IGDLVIYVDVSDIP 308
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 32.3 bits (70), Expect = 0.76
Identities = 22/117 (18%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP-NR 369
+R + + DS + +P ++++ + + D+K + +++ DSP ++
Sbjct: 361 KRRKRERERDSGAQEESSPAGSPSVDNSSVNMGEDMDIDVDKKPEQEKTEIVELDSPVSK 420
Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
+R+ + ENV ES + ANV++K + I+ + D +++A + +
Sbjct: 421 TQRVIENKQEVEEEENVEVESENKTKANVEDKTQSIDRSMEETGDEPVNSAAEKLVV 477
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 32.3 bits (70), Expect = 0.76
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
+ V AK +S+++ D + D+ + K D S++ DSD + D
Sbjct: 146 KNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAK---DSSSSDDDSDEDSEDEKPAT 202
Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
K+ + + +E SD++ + K QKK +T + S + S+ +
Sbjct: 203 KKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSDESSES 253
Score = 28.7 bits (61), Expect = 9.3
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
Query: 334 EENSTTTAKANVLKTENDEKSN-EPDSDVNVTDSPNRGKR-----IGVRFRSSWIPENVR 387
+ S T A + T+ +K EP+ D++ S + K+ + +P+ V
Sbjct: 3 KSKSATKVVAEIKATKPLKKGKREPEDDIDTKVSLKKQKKDVIAAVQKEKAVKKVPKKVE 62
Query: 388 NESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSY 447
+ D + + K KK+ + +SS E S + S P+ T +
Sbjct: 63 SSDDSDSESEEEEKAKKVPAKKAASSSDESSDDSSSDDEPAPKKAVAATNGTVAKKSKDD 122
Query: 448 CSQSEGGNSD 457
S S+ +SD
Sbjct: 123 SSSSDDDSSD 132
>At5g52310.1 68418.m06492 low-temperature-responsive protein 78
(LTI78) / desiccation-responsive protein 29A (RD29A)
Length = 710
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/75 (22%), Positives = 31/75 (41%)
Query: 177 LSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDYMAWKKPDINTPIVXXXXXX 236
LS R+ +E E+++TP+ + + + A DDE +K ++ TPI
Sbjct: 155 LSDREESRETHHESLNTPVSLLSGTEDVTSTFAPSGDDEYLDGQRKVNVETPITLEEESA 214
Query: 237 XXXXXXXXXRYKSNI 251
Y+S +
Sbjct: 215 VSDYLSGVSNYQSKV 229
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
K S E E+ ++ S D+ TP+ EE+S + K E E +NE V +
Sbjct: 963 KTDSIELGEIAQEERSVTDL--TPLQ--EESSQPNEQEKETKLEKHEPTNEEVKSDEVIE 1018
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSS 413
+ + + EN+ N +++ + QK +ET QT S
Sbjct: 1019 VLSASPSKELEGETVVEAENIENIKENEEEQAAEKIQKSLETVQTVES 1066
>At2g18220.1 68415.m02123 expressed protein contains Pfam domain
PF03715: Uncharacterised protein family (UPF0120)
Length = 779
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 332 KVEENSTTTAKANVLKTENDEK--SNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNE 389
+ ++ + + +++V+ EN N P SD D +R ++ F SSW+P + E
Sbjct: 622 RAQQRNESLVESDVIVGENSAVFGKNAPSSDDE--DDEDRMEKGAAAFNSSWLPGSDSKE 679
Query: 390 SSDDDFANVKNKQKKIETFQTSSSDGE 416
++ K K+K+ +T E
Sbjct: 680 KEPEEEKTKKKKRKRGGKSKTEKKQDE 706
>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 662
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 329 PIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRN 388
P+++VE A V++ E +E+S+ D DVNV S R + + + V
Sbjct: 145 PVEEVERQDDGLA---VIE-EEEERSSASDEDVNVEKSVEEEGNEDERDKDVIVAKPVEE 200
Query: 389 ESSDDDFANV 398
+ D+D ANV
Sbjct: 201 RTIDEDIANV 210
>At3g02810.1 68416.m00273 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 558
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
++ N V+ + A + DK+ EE+S + K +V K E +K E DS + D
Sbjct: 372 HDSNLVSPPPELATEDDKSSTSSGEESSLESEKESVSKNEYKKKHEEEDSSMESDD 427
>At5g59020.1 68418.m07393 expressed protein
Length = 780
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 361 VNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQT--SSSDGECS 418
VNV DS + GK++G + + V+N FA K T + SS +GEC+
Sbjct: 438 VNVNDSAH-GKKLGSSMVRAVLRVTVKNNQPLFTFAVNKETDIIAATQKKMGSSEEGECT 496
Query: 419 ASAPSIALPSHHTMSDWVGQ 438
+ ++ H S W+ Q
Sbjct: 497 SVYTFFSIKDHKRNSGWLNQ 516
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD--SDVNVTDS 366
S+ +N+ T K S+ + P +K + S+ V K++ EK +P D D
Sbjct: 167 SSSKNKTTIKPPSSK-LSSPPSEKKSQPSSKP----VTKSKQSEKEIKPFWLDDEEDEDF 221
Query: 367 PNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQ 402
+ + + RF+ S IP+ R ++ ++ N NKQ
Sbjct: 222 VSEFRDLPTRFQRSLIPDLERISTTSKNYINKANKQ 257
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 314 EVTAKDDSANDVDK-TPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKR 372
++ D+ A DK + + K E+N+ T ++ DE E + D
Sbjct: 57 QIKKDDEKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEATNMDEDADGKKEQTD 116
Query: 373 IGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
GV + + ENV ES D+++A K+ K
Sbjct: 117 DGVSVEDTVMKENV--ESKDNNYAKDDEKETK 146
>At3g60920.1 68416.m06815 beige/BEACH domain-containing protein
contains Pfam PF02138: Beige/BEACH domain; similar to LBA
isoform gamma (GI:10257405) [Mus musculus]; similar to
beige-like protein (CDC4L) - Homo sapiens; similar to
Neurobeachin: kinase A-anchoring, beige/Chediak-higashi
protein homolog implicated in neuronal membrane traffic
(AKAP550) (GI:11863541) [Drosophila melanogaster].
Length = 1928
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 330 IDKVEENSTTTAKANVLKTENDEKSNE--PDSDVNVTDSPNRGKRIGVRFRSSWIPENVR 387
++ V+E +TT +++ + ++ ++E PDSD+N+ +P+ + SS E
Sbjct: 1809 MNNVKELNTTDPNTHMVSSFSNPTTSETEPDSDMNIVSTPSNATTNQIDTESS---EAAN 1865
Query: 388 NESSDDDFANVKNKQKKIETFQTS 411
E+S+ KN K + TS
Sbjct: 1866 YENSNSSIKTSKNTSKITKLTPTS 1889
>At4g12580.1 68417.m01984 expressed protein predicted protein
Length = 101
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 345 VLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
V TE + P V+ DS + V + +P NV NE+ + A VK ++
Sbjct: 16 VSNTEEKTTTETPKKTVHADDSATV---VEVEIKGEEVP-NVENETEKTEIAPVKEEKPV 71
Query: 405 IETFQTSSSDGECSASAPS 423
+ T DG+ + +P+
Sbjct: 72 VITAVVEEKDGKPAVKSPT 90
>At2g47220.1 68415.m05897 3' exoribonuclease family domain 1
protein-related similar to polynucleotide phosphorylase
[Pisum sativum] GI:2286200, polyribonucleotide
phophorylase [Spinacia oleracea] GI:1924972; contains
Pfam profiles PF05266: Protein of unknown function
(DUF724), weak hit to PF01138: 3' exoribonuclease
family, domain 1
Length = 469
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
++ + ++++ E T V K + +E N ++ N K + E E +SD+
Sbjct: 194 VTSSPVITSTPLEHTEAGTKGKTVPKKTLQPMEMNQLERSEDNSRKRKRGEL--EHNSDL 251
Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNK 401
N T P S W P+ V+N ++DDD K K
Sbjct: 252 NETVLP-----------SDWTPDPVKNFAADDDDEETKAK 280
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
K+ N V+ + + + ++ + ++ S TAK + K + DSDVN+ D
Sbjct: 483 KVRLNLHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQD 542
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
+ + G + +PE+ + + K +KK++
Sbjct: 543 AKDTSDATGT---DNGVPESAEKPVQMETDSKAKAPKKKVK 580
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 165 NSYYETIIDNELLSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDYMAWKK 222
N Y+ + +S +K+EL N +T N+A +KL+ +D ++E +++
Sbjct: 279 NGYHSNLEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRR 336
>At5g11050.1 68418.m01291 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA binding domain;
identical to cDNA putative transcription factor MYB64
(MYB64) GI:15375309
Length = 423
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 335 ENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
EN TT+ NVL T N ++ N DS ++ D P
Sbjct: 252 ENIMTTSGNNVLSTSNYDQFNSEDSTSSLLDDP 284
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S E NE+ K+ + +++ + EN T K++ + + + S + V TDS N
Sbjct: 382 SQEENEI--KETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSN 439
Query: 369 --RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
+G + N+ ++DD + ++++K+ + + + AL
Sbjct: 440 TQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKEENNRNGETEETQNEQEQTKSAL 499
Query: 427 PSHHT 431
HT
Sbjct: 500 EISHT 504
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 176 LLSYRKRKKELPKEN-VSTPLEPTAKNKAIVKLKAKDSDDED 216
+LS +K +K++ K+ + TP + K K KLK DSD+E+
Sbjct: 5 MLSDKKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEE 46
>At2g05642.1 68415.m00603 expressed protein
Length = 394
Score = 29.5 bits (63), Expect = 5.3
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 320 DSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSN-EPDSDVNVTDSPNRGKRIGVRFR 378
D V K + ++ N+T V N S EPDSD+N+ +P+ +
Sbjct: 273 DKPEIVQKFQENLLQMNTTDPNTHMVSSFSNSTTSETEPDSDMNIVSTPSNATTNQIDTE 332
Query: 379 SSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
SS E E+S+ KN K + TS
Sbjct: 333 SS---EAANYENSNSSIKTSKNTSKITKLTPTS 362
>At1g49870.1 68414.m05591 expressed protein ; expression supported
by MPSS
Length = 828
Score = 29.5 bits (63), Expect = 5.3
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 249 SNILTKKHLESFNVRQNQHRALFADGDDGFESLXXXXXXXXXXXXRVKILQARLSGNKIV 308
S++L + L NV N ++A +G + ESL KI + GN+ +
Sbjct: 563 SSVLLTEELGKENVDSNNNKA---EGQE--ESLDMILVKPVHRLETEKIASEAVYGNRRI 617
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVE--ENSTTTAKANVLKTENDEKSNE 356
+R + + + +DK + V E KA V +TEN +++NE
Sbjct: 618 Q-KRKQGAKTESNYESLDKILVKHVPKLEKEKQMFKAGVEETENSKRNNE 666
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 29.1 bits (62), Expect = 7.1
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 299 QARLSGNKIVSNERNEVTAK---DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSN 355
+ +L G K NE + K D +DVD+ +KV EN K LK +N+ +
Sbjct: 148 EEKLEGGKANGNEEGDTEEKLVGGDKGDDVDEA--EKV-ENVDEDDKEEALKEKNEAELA 204
Query: 356 EPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
E + + K V + V ++ ++ N +++K + + S D
Sbjct: 205 EEEETNKGEEVKEANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDK 264
Query: 416 E 416
E
Sbjct: 265 E 265
>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 549
Score = 29.1 bits (62), Expect = 7.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENS-TTTAKANVLKTENDEK-----SNEPDSDVNVT 364
E+++VT +D + ND D T ++ E + + T N EK S++P S
Sbjct: 226 EKSDVTTEDAAGNDSDSTNPEETETSPFLANEEVESHNTVNQEKEISSPSSKPKSQAADE 285
Query: 365 DSPNRGKRI----GVRFRSSWIP 383
D + +RI VR W+P
Sbjct: 286 DFMSTWQRIIRLDAVRANDEWVP 308
>At5g04190.1 68418.m00407 phytochrome kinase substrate-related
contains similarity to Swiss-Prot:Q9SWI1 phytochrome
kinase substrate 1 [Arabidopsis thaliana]
Length = 406
Score = 29.1 bits (62), Expect = 7.1
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC---SASAPSI 424
NR I V F S P+N + +++ + + + + S+D C + S P
Sbjct: 25 NRSNDIDVSFSSYLKPDNNEQQQKENEDTELSIFEARSYFSENGSNDSRCQTRNLSGPRF 84
Query: 425 -ALPSHHTMSDWVGQTTNSEES 445
++ S S VGQT +SE S
Sbjct: 85 SSVASAKVSSFTVGQTASSEAS 106
>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 669
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 349 ENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANV 398
E +E+S+E D DVNV S R + ++ + D+D ANV
Sbjct: 162 EEEERSSESDEDVNVEKSVEDEGHEDERDEDVIVEKSGEERTIDEDIANV 211
>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 564
Score = 29.1 bits (62), Expect = 7.1
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
NE+ E + + P+++ E A V++ E +E+S+ D DVNV S
Sbjct: 137 NEKEEGKETETNKELACANPVEEAERQDDGLA---VIE-EEEERSSASDEDVNVEKSVED 192
Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANV 398
R + + V + D+D ANV
Sbjct: 193 EGDEDERDEDVIVEKPVEERTIDEDIANV 221
>At4g03830.1 68417.m00534 myosin heavy chain-related
Length = 578
Score = 28.7 bits (61), Expect = 9.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
R K + RL +K+V T +D +K + EE+ K + L ++ND
Sbjct: 267 RAKQEKDRLKSDKVVMTG----TLEDSKLQAANKAKQPRAEEDGGARQKPSTLASKNDAP 322
Query: 354 SNEPDSDVNVTDSPNRGKRIGVRFR 378
+ + + T S + KR G + R
Sbjct: 323 APDSRTPSKATSSRDPSKRYGDKKR 347
>At2g45380.1 68415.m05645 expressed protein similar to
gi2344899|AC002388
Length = 491
Score = 28.7 bits (61), Expect = 9.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTT 339
RV+ ++A LSG I +N R E T K +KTP K NS++
Sbjct: 60 RVERVRAILSGRSIENNRRTE-TTKPAGELRREKTPAKKGNSNSSS 104
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 316 TAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
T ++D A + + P +VE+N+T K ++ + E++++ E DSD ++ N
Sbjct: 100 TGEEDKAI-IKQLPPRRVEKNNTAQLKGSIEEEESEDEWIEVDSDEDLDAEMN 151
>At2g20240.1 68415.m02365 expressed protein
Length = 713
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 440 TNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
+ S+ SS CS + G+ + G H+ D +WD
Sbjct: 56 SRSKSSSRCSLTCVGSKEAGKHHREDETWD 85
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
K+ N V+ + + + ++ + ++ S TAK + K + DSDVN+ D
Sbjct: 483 KVRLNLHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQD 542
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
+ + G + +PE+ + + + +KK++
Sbjct: 543 AKDTSDATGT---DNGVPESAEKPVQMETDSKAEAPKKKVK 580
>At1g17040.1 68414.m02071 transcription factor-related contains Pfam
profile: PF00017 Src homology domain 2; similar to
transcription factor [Danio rerio] (GI:3687402)
Length = 641
Score = 28.7 bits (61), Expect = 9.3
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
V+N+ ++ DS + + + + + + + + N E +++E D+ + TDS
Sbjct: 322 VTNQIRCISRNRDSVSSMKRIRLGEEKVSESKIVNGNGTSMEWRPQNHEEDN--SSTDSE 379
Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL- 426
N R FR IP+ + + N+ + ++ +SSD E S A ++L
Sbjct: 380 NTEMRDSTAFRRYSIPDWIIFKYC---LGNLTERALLLKEITNNSSDEEVSEFADQVSLY 436
Query: 427 --PSHH 430
SHH
Sbjct: 437 SGCSHH 442
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,567,920
Number of Sequences: 28952
Number of extensions: 422255
Number of successful extensions: 1415
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 52
length of query: 495
length of database: 12,070,560
effective HSP length: 84
effective length of query: 411
effective length of database: 9,638,592
effective search space: 3961461312
effective search space used: 3961461312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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