Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
(495 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.002
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.006
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 36 0.010
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 36 0.013
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 36 0.013
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 33 0.091
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 33 0.12
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 32 0.16
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 32 0.21
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 32 0.21
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 31 0.37
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 30 0.64
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 1.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 29 1.1
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 29 1.1
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 29 1.1
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 29 1.5
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|... 29 1.5
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 2.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 2.6
SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor c... 28 2.6
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 3.4
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 28 3.4
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 4.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 6.0
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 27 6.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 6.0
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 27 7.9
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 27 7.9
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 7.9
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 27 7.9
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 38.3 bits (85), Expect = 0.002
Identities = 32/176 (18%), Positives = 76/176 (43%), Gaps = 2/176 (1%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
++ +E + S+++ D + + E+S+ ++ ++++ +S+ DSD + + S +
Sbjct: 96 AHSSSEASGSGSSSDESDSSSSES--ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 153
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
+ SS + +ESS +D + + + SD S+S S
Sbjct: 154 ESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSS 213
Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
+ S ++ SE SS + S +SD +++ S + D S++ +++
Sbjct: 214 EGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKD 269
Score = 37.9 bits (84), Expect = 0.003
Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 309 SNERNEVTAKD-DSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
S+ +E +++D DS++ + + E S +++ ++ ++E+ + N+ S + ++S
Sbjct: 133 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192
Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIET---FQTSSSDGECSASAPSI 424
+ + SS +E SD ++ ++ + +SSSD E +S+
Sbjct: 193 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 252
Query: 425 ALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDT 480
S + S+ + +S+ SS S SE +S ++SS + +SD+
Sbjct: 253 DSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDS 308
Score = 37.5 bits (83), Expect = 0.004
Identities = 34/176 (19%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S + + ++ DS ++ D +S + ++++ +++ S+ +S+ + D+ +
Sbjct: 123 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDS 182
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
SS E+ + SS D + + + + +SSS+ E S+ + S
Sbjct: 183 SSSSSDSESESS--SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 240
Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
+ S+ + ++S SS S+SE + D + S D D +SD+ + E
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSED-----DSSSDSSDSE 291
Score = 37.1 bits (82), Expect = 0.006
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S++ ++ +DS D + D E+S+ + ++ + ++ +S+ D+D + + S +
Sbjct: 186 SSDSESESSSEDS--DSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 243
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
+ SS + +ESS D + N + + SSD E +S+
Sbjct: 244 ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSED----- 298
Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
SD T++S +S S SE GNS+
Sbjct: 299 ----SD---STSSSSDSDSSSSSEDGNSN 320
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 37.1 bits (82), Expect = 0.006
Identities = 32/179 (17%), Positives = 74/179 (41%), Gaps = 5/179 (2%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
E ++ + S V K K +E S++ +++ +E++ S+E +S + ++S +
Sbjct: 57 EAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSE 116
Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQK-----KIETFQTSSSDGECSASAPSIA 425
+ + ESS + ++ +++++ KIE + SSSD +S+
Sbjct: 117 SSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESE 176
Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
S + S+ + E SE + ++ S D + D S++ + +
Sbjct: 177 SESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED 235
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 36.3 bits (80), Expect = 0.010
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKS----NEPDSDVNVTD 365
N+ N +D D + P+ K + AKAN + DE+S E DS+ V
Sbjct: 53 NDSNYDLKPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRK 112
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
+ K+ + + +++ + S D++ + K KK + S DG
Sbjct: 113 NKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDG 162
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 35.9 bits (79), Expect = 0.013
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
+ N +++ A D + T VE+ + T+ N T+N + N D ++ +
Sbjct: 17 KENVKIIREEEAKDQESTDDIAVEDGTGTSPDLNFFSTQNVMQMNFEDEYSEFSNEDDEA 76
Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKI-ETFQTSSSDGECSASAPSIA--LP 427
+ I F S IP D+++ + Q+ + E T+++D + S + S+A +
Sbjct: 77 E-IDNSFADS-IPNEPEIPDMQDEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADIS 134
Query: 428 SHHTMSDWVGQTTNSEESSYCSQSEGGNSDVG 459
+T+ ++T + + GN DVG
Sbjct: 135 DVNTLGKDNSESTEEPVNEVNETATLGNEDVG 166
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 35.9 bits (79), Expect = 0.013
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDK-VEENSTTTAKANVLKTENDEKSNEP 357
+A+ + ++ E+++V + +S ++ +K + K VEE T + KTE D K+ E
Sbjct: 404 EAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKET 463
Query: 358 DS-DVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
DS + N D K + + E ++ + D V +K++K ++ +T+
Sbjct: 464 DSIEANDKDEKTDSKETEDKVEETESKE-ADVKAKETDSIEVDDKEEKTDSKETA 517
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 33.1 bits (72), Expect = 0.091
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 296 KILQARLSGNKIVSNERNEVTAKDDSANDVDK-----TPIDKVEENSTTTAKANVLKTEN 350
KI Q ++ + ER ++ D+ N+ + T + ++E+ TTA+ + +++
Sbjct: 64 KISQMEADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSL 123
Query: 351 DEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK--IETF 408
+ K N P S NR K R ++ + + E + A++KN++KK +
Sbjct: 124 NTKENTPQQP---KKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKIL 180
Query: 409 QTSS-------SDGECSASAPSIALPSHHTMSDWVGQTTNSEESSY----CSQSEG 453
+ + +DG C ++ S L HH + Q ++ + Y C Q EG
Sbjct: 181 EEAGLVAVDIPADGNCLFASISHQLNYHHNVK-LNSQALRNKSADYVLKHCEQFEG 235
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
Q + NK+ + T +D++ + V+ N NVL + + NE +
Sbjct: 107 QVASTNNKLTPLPSLQKTTSSSEGSDIEMEAMYPVDGNDPDPINVNVLAQMHQQMLNEQE 166
Query: 359 SDV-NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNK 401
+ + S R KR+G + +NV ++ ++D ++ +
Sbjct: 167 ESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADRIERR 210
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 32.3 bits (70), Expect = 0.16
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 338 TTTAKANVLKTENDEKSNEPDSD-VNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFA 396
TT + ++V T + S+ P S T SP+ SS + + SS +
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSS----SSSSSSSSSSSSSSSSSS 180
Query: 397 NVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNS 456
+ + + +SSS S+S+ S+ + S T S +++S SS S+ +S
Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITS-STSSSHSSSSSSSSSSSSSSRPSSSSS 239
Score = 29.5 bits (63), Expect = 1.1
Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
L+GN ++ + + +++ +P ++TTT + + + S+ S
Sbjct: 117 LTGNGVLQTTVSSSSVSSTTSSSSSSSPSSS---STTTTTSPSSSSSSSSSSSSSSSSSS 173
Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
+ + S + SS + + SS + + + +SSS S+S
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
Query: 422 PSIALPSHHTMSD--WVGQTTNSEESSYCSQS 451
PS + TMS ++ T + SS S S
Sbjct: 234 PSSSSSFITTMSSSTFISTVTVTPSSSSSSTS 265
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.9 bits (69), Expect = 0.21
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 315 VTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIG 374
V AK ++++ K P ++T T+ AN T N+P +D+N TD + ++
Sbjct: 217 VAAKPEASSTATKGPRPTTSASNTNTSPANGAPT------NKPSTDINTTDPATQTTQVS 270
Query: 375 V----RFRSSWIPENVRNESSDDDFANVKNKQ 402
S P N + S+ + N K+
Sbjct: 271 ASNSPALSGSSTPSNTSSRSNRQNHGNFSEKR 302
Score = 26.6 bits (56), Expect = 7.9
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANV-LKTENDEK-SNEPDSD-VNVTD 365
SN+ N A +++ +K + T T++AN KTE+ K ++E D++ N +
Sbjct: 23 SNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQKKTESTGKITSEADTEKYNSSK 82
Query: 366 SPNRGKRIGVRFRSS---------WIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
SP K V +SS W +N S++ ++ +K ET D
Sbjct: 83 SP-VNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQKPETSSQIGKD 139
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 31.9 bits (69), Expect = 0.21
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
V E+N T K + ++ ++K +E+ T+ S S ++TD+
Sbjct: 423 VGKEQNH-TEKQVAIETPEQQKVEKEDEHLNLQGSFIEESTKQPISSKPSTSSPDMTDAA 481
Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
G+ FR + N S+ D F+N+ K+ E
Sbjct: 482 TGGRVSSSSFRDKILQTNFSPRSTIDSFSNISKKRNSEE 520
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 31.1 bits (67), Expect = 0.37
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 5/151 (3%)
Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLK--TENDEKSNEPDSDVNVTDSP 367
N N + D S++ P+ + S K N K E+ + +S+ +
Sbjct: 233 NRANFFSINDASSDSSSDAPLRTLSSPSRLRMKDNDRKYLVEHSPAALIKESET-IDGID 291
Query: 368 NRGKRIGVRFRSSWIP-ENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
++ R R S P E+ N+ S D ++ K + K E + E S S PS A+
Sbjct: 292 DKSLRSSTREVSVESPNEDSVNDDSSSDVSDEKETEAKHEIRAPAIIVRETS-SHPSTAV 350
Query: 427 PSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
PS + ++ T + ++ S S NSD
Sbjct: 351 PSENDTTESENDTLSESSTTSISSSPSENSD 381
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 321 SANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
S ND ++ D + E+STT+ ++ +EN + S+ D+ DSPN+
Sbjct: 352 SENDTTESENDTLSESSTTSISSS--PSENSDTSD----DLTKVDSPNK 394
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 145 RSELSDNGLRYGGSSKYFVVNSYYETIIDNELLSYRKRKKELPKEN---VSTPLEPTAKN 201
+ +S+NG +G + + ++T+ + L YR +E E+ +ST + K
Sbjct: 45 KQHISENGQNFGSAISSNISQRNFKTLRASHLSQYRDCNRENNTEDKNVISTGIAVNEKY 104
Query: 202 KAIVKLKAK 210
++++KLK K
Sbjct: 105 QSVLKLKEK 113
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.5 bits (63), Expect = 1.1
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 322 ANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSW 381
++D D +D EEN T+++ LK ++D S E S+ S
Sbjct: 9 SSDSDAESVDSSEENRLTSSR---LKKQDDSSSEEESSEEESASSSES------------ 53
Query: 382 IPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTN 441
E+ ES ++ K+K + + S SD E S +SD +
Sbjct: 54 --ESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESE 111
Query: 442 SE-ESSYCSQSE 452
SE ES S+SE
Sbjct: 112 SESESEEESESE 123
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDV-DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSD 360
++G+ + S E E ++DD D D + +N + + + EN+E ++E D
Sbjct: 596 ITGSLLDSIEGQEEVSQDDEEGDFEDLEDEENSSDNEMEESSGSSVTAENEESADEVDFQ 655
Query: 361 VNVTDSPNRGKRIGVRF 377
++ + + + +RF
Sbjct: 656 TEREENARKKEELRLRF 672
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 384 ENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
E++ ES + DF+++K K+KK ++ S+ + E AS+
Sbjct: 101 EDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASS 138
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 295 VKILQARLSGN--KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTA---KANVLKTE 349
+K+LQA + + K+++ + S ND D + + K N+ A K VL T
Sbjct: 431 IKLLQAHFNVDMPKLLNLTFELQHLRKTSKNDEDMSYVRKNSYNTNALANSLKNRVLSTY 490
Query: 350 NDEKSNEPDSDVNVTDS 366
N K+N P S + TD+
Sbjct: 491 NTVKANVPQSSSSYTDN 507
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 306 KIVSNERNEVTAKDDSANDV--DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSD-VN 362
+++S E + D N++ +K +KVEE+ V + E+D++ ++ DS+ +
Sbjct: 65 EVISLEPTHLINDIDDDNEIIEEKKETEKVEESELEPRYTRVFRDEDDDQKHQLDSEAIK 124
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANV 398
+ D + G I N+ +E+ +A V
Sbjct: 125 LLDIADHGNEEISMDSQLEITGNILSETEKMAYAGV 160
>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 141 RRQSRSELSDNGLR-YGGSSKY-----FVVNSYYETIIDNELLSYRKRKKELPKENVSTP 194
++Q+R +L D+G++ YGG + Y F+ + Y + +E L R+ +E K+++ P
Sbjct: 93 KQQTRYKLEDSGMKVYGGLNYYCSKDCFLKSCQYMVELSDEPLWIREDAREAMKQHLD-P 151
Query: 195 LEPTAKNKAIVKLKAKD 211
+ A K + K +D
Sbjct: 152 RQDEAFRKELENKKIED 168
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 350 NDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFAN 397
+ E+S D + N+T S N GK S + E +DD N
Sbjct: 36 SSEESESEDKESNLTSSENIGKNPERELNSDGTDRIIEEEEEEDDIEN 83
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 2.6
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 424 IALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNR 483
I L S T+ +GQ +S ES G + + H ++ F ++P++D G R
Sbjct: 647 INLASLETLEP-IGQLLSSYESGILLSERGDITPITPH----KNFRLFGCMNPSTDVGKR 701
Query: 484 EIQQLF-ARFT 493
E++ F +RFT
Sbjct: 702 ELEPSFRSRFT 712
>SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor
complex subunit Rrn5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 165 NSYYETIIDNELLSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDE 215
++ +ETI + LL+ ++ K +L +V T L+ T+K+ + + DSDDE
Sbjct: 441 DALFETIPLSNLLAQKRMKDKLKGSDVFTTLKITSKSLHNID-EHSDSDDE 490
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 27.9 bits (59), Expect = 3.4
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 295 VKILQARLSGNKIVS-NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
VK+++ + +S N+ +EV K S +D+ +D+VEE+S+ + K +K
Sbjct: 244 VKLIERESNSCSTISINKEDEVVPK--SPLSLDRKKVDEVEEHSSIAKLDSEEKIRETKK 301
Query: 354 SNEPDSDVNVTDSPNRGK-RIGVRFRSSWIPENVRN--ESSDDDFANVKNKQKKIETFQT 410
N S +++ P G S +N N +S DD + + FQ
Sbjct: 302 KN---SSTSLSPDPTSDNFEWGSWVSSQDTSKNSSNLASASVDDVSEESQVEPNTLIFQN 358
Query: 411 SSSDGECSASAP 422
SS S SAP
Sbjct: 359 FSSP-STSLSAP 369
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDS 359
N I S NE K + + D +P+ + + T+ + + +E+ + EP S
Sbjct: 482 NGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTSNGEPSTATSESKDSVLEPSS 536
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 304 GNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
GNKI +E NE+ ++ + +T +DK E N T+ K+ + NE D
Sbjct: 407 GNKI--SENNELLNENRVLKEKLQTYLDKKESNVTSKIKSTAENSSKPLSMNEAD 459
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 6.0
Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Query: 303 SGNKIVSNERNEVT-AKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
S S +E T + +S++ +D + + S+T+ + ++ + S
Sbjct: 116 SSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTF 175
Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
+ S + V SS + S+ + + + + +SSS S+S
Sbjct: 176 SSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSL 235
Query: 422 PSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
+ ++PS + S + +S SS + S +S + ++ SS
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSS 281
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 399 KNKQKKIETFQTSSSDGECSAS--APSIALP 427
K K +K+E TSSS+ E AS +PS A+P
Sbjct: 551 KKKYEKMEVDYTSSSETESDASILSPSAAIP 581
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
+S + +SN+R + ++ D+ N+++ D +NS+ K + + D+KS E S V
Sbjct: 1421 ISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFELASAV 1480
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 7.9
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 402 QKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFH 461
++++ F S AS +I+ PS ++SD + ++ SS + S G++D+
Sbjct: 109 EEEVSAFTVSVPVDVDVASHVNISSPSAPSLSDNLFPGSSFSASSQQNPSSPGSNDIKSE 168
Query: 462 YAADSSWDPFALLDPTSDTGNREIQQLFARFTL 494
+AA + +L PTS T + F+ L
Sbjct: 169 FAAVKN---EYVLSPTSPTTSAAFPSSFSSLPL 198
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 181 KRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDY 217
K K++ + +P E K VK AKD+ D DY
Sbjct: 47 KASKKIDENKDKSPQEMAENAKQSVKQTAKDAKDTDY 83
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
E +DDS N VDK ++ +ST + VL + N P S +
Sbjct: 335 ETKEEDDSENSVDKKENEEDIISSTMMPQDEVLANLTEAYENAPQSTI 382
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 7.9
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 335 ENSTTTAKANVLKTENDEKSNEPDS-DVNVTDSPNRGKRIGVRFRS--SWIP--ENVRNE 389
E+ T T K +K E E S + + V ++ R + + V R+ + +P E +N+
Sbjct: 660 ESMTKTEKGVEIKFEKYEASIDFSTMKVECSNEALRSRVVHVLSRAINTILPFSEASQND 719
Query: 390 SSDDDFANVKNKQKKIETFQTSSSD 414
S+DDF N ++ KI QT D
Sbjct: 720 VSEDDFENEESDDDKIFEQQTKIED 744
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,072,960
Number of Sequences: 5004
Number of extensions: 85768
Number of successful extensions: 340
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 288
Number of HSP's gapped (non-prelim): 53
length of query: 495
length of database: 2,362,478
effective HSP length: 76
effective length of query: 419
effective length of database: 1,982,174
effective search space: 830530906
effective search space used: 830530906
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -