Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
(495 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 42 9e-04
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 39 0.008
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 39 0.011
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.024
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.057
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) 33 0.40
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9) 33 0.40
SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26) 33 0.53
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 33 0.53
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 33 0.70
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70
SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.92
SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4) 32 0.92
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 32 1.2
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 32 1.2
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35) 32 1.2
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5) 31 1.6
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 31 1.6
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 30 3.7
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091) 30 3.7
SB_52671| Best HMM Match : SPAN-X (HMM E-Value=2.6) 30 3.7
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 30 4.9
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 30 4.9
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 30 4.9
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08) 30 4.9
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55) 29 6.5
SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7) 29 6.5
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 29 6.5
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 29 8.6
SB_3273| Best HMM Match : Neuromodulin (HMM E-Value=1.9) 29 8.6
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 8.6
SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 29 8.6
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 42.3 bits (95), Expect = 9e-04
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTE-NDEKSNEPDSDVNVT 364
K N+ + AK +S+++ D + D+ EE A V KT E S+E DS
Sbjct: 195 KKADNKGKKTQAKQESSSEEDDSS-DEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEE 253
Query: 365 DSPNR-----GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS- 418
+ P + GK+ + SS ++ ++ + +K+KK Q SSSD S
Sbjct: 254 EKPKKKADVKGKKTPAKQESSSGDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSD 313
Query: 419 -ASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSE 452
+S +P+ + + E SS S SE
Sbjct: 314 DSSDEDTKMPTKSKLKNGTKTKAKEESSSSDSSSE 348
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
K ++ + +DDS++D D+ P K + T +E+D E + D
Sbjct: 139 KKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDEKPKKKAD 198
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
N+GK+ + SS ++ +E + +K KK Q SSS+ + S
Sbjct: 199 --NKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSS 249
Score = 33.9 bits (74), Expect = 0.30
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 312 RNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGK 371
+ E +++DDS+++ D+ P K + T +E D+ S+E + + + ++ K
Sbjct: 176 KQESSSEDDSSDEEDEKPKKKADNKGKKTQAKQESSSEEDDSSDE-EEEKPKKKADDKVK 234
Query: 372 RIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
+ + SS ++ NE + K KK Q SSS + S
Sbjct: 235 KTPAKQESS-SEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDSS 280
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 39.1 bits (87), Expect = 0.008
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 8/169 (4%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEEN--STTTAKANVLKTENDEKSNEPDSDVNVTDS 366
SNE +E D+S + DK E+ S + K+N N+ ++ D + N +D
Sbjct: 104 SNESDESNESDESNESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDE 163
Query: 367 PNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
N S+ E+ NES + + ++ N+ + S+ E + S S
Sbjct: 164 SNESDESNGSDESNGSDES--NESDESNESDESNESDESNESDESNGSDESNESDES--- 218
Query: 427 PSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLD 475
+ S+ ++ S+ES+ +S G + + +S+ A+ D
Sbjct: 219 -NESDESNGSDESNESDESNESDESNGSDESYESDESDESNESGLAVTD 266
Score = 37.9 bits (84), Expect = 0.019
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
++V++ER ++KD+S + D E N + + + E+DE SNE D + N +D
Sbjct: 71 EVVTDERGISSSKDESDESDESNESD--ESNESDKSNESDESNESDE-SNESD-ESNESD 126
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIA 425
N + +S+ + RNES + D + N + S+ E + S S
Sbjct: 127 KSNESDKSNESDKSN--ESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDES-- 182
Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGN 455
+ S+ ++ S+ES+ +S G +
Sbjct: 183 --NESDESNESDESNESDESNESDESNGSD 210
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 38.7 bits (86), Expect = 0.011
Identities = 32/167 (19%), Positives = 68/167 (40%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N N + + D+S++D + + ++T + +N EN N ++ N
Sbjct: 75 SDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSN 134
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
+S + + ++ +N ++S+ D + N T S++D S ++
Sbjct: 135 QDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSS 194
Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
S S ++ SD ++ ++S S NS+ Y +S+ D
Sbjct: 195 SGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSD 241
Score = 35.5 bits (78), Expect = 0.099
Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 4/182 (2%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N N ++ + D+S +D + + +++ + ++ T+N N + N
Sbjct: 190 SDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSN 249
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
PN + P+N +++S+ D +N N S++D S ++
Sbjct: 250 ----PNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSN 305
Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
S ++ S+ Q ++ + S S NS+ + +S+ D + TSD N
Sbjct: 306 PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPN 365
Query: 483 RE 484
+
Sbjct: 366 TD 367
Score = 35.1 bits (77), Expect = 0.13
Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
Query: 325 VDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPE 384
+ +T I + + ++ ++K D ++E + N T S N S+ +
Sbjct: 20 IPQTRIPRTQITRPWISRIGIIKKNPDNSTSENSNSYNST-SDNSTSDNSTSDNSN--SD 76
Query: 385 NVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEE 444
N +++S+ D +N N + S+SD + ++ S ++ SD ++++
Sbjct: 77 NSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQD 136
Query: 445 SSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
+S S+ NS+ + +S+ D + TSD N
Sbjct: 137 NSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSN 174
Score = 34.7 bits (76), Expect = 0.17
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 7/186 (3%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK-----SNEP 357
S + S+ N + D++ + P + +NS + +D K +N
Sbjct: 94 SSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNS 153
Query: 358 DSDVNVTDSPNRGKRIGVRFR-SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGE 416
+SD + TD+ N + +N ++S D ++ N T S+SD
Sbjct: 154 NSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNS 213
Query: 417 CSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDP 476
S ++ S S ++ SD ++ ++S S NS+ +AD+S +P
Sbjct: 214 NSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNS-NPDNSNSD 272
Query: 477 TSDTGN 482
S+T N
Sbjct: 273 NSNTDN 278
Score = 33.5 bits (73), Expect = 0.40
Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 4/182 (2%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N N ++ + KD+S + T +NS + N + SN +S +
Sbjct: 230 SDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNSNPDNSNS--DNSNTDNSNSDNSSSD 287
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
++S N S+ PEN +++S+ + +N N S+++ S ++
Sbjct: 288 NSNSDNSNTDNSTSNNSN--PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSN 345
Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
S S ++ D + + ++S S GN + + +S+ D + +SD N
Sbjct: 346 SDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSDNSSSDNSN 405
Query: 483 RE 484
+
Sbjct: 406 SD 407
Score = 33.1 bits (72), Expect = 0.53
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTT-TAKANVLKTENDEKSN-EPD-SDVNVTD 365
S+ + + D++N + T + ENST+ + +N +N + +PD S+ N ++
Sbjct: 281 SDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSN 340
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIA 425
S N S+ P+N+ +++ + D + N S+SD S ++ S
Sbjct: 341 SDNSNSDNSTSDNSN--PDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSDN 398
Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
S ++ SD ++ ++S +S NS+
Sbjct: 399 SSSDNSNSDNSYTDNSTSDNSKKDKSNPNNSN 430
Score = 32.7 bits (71), Expect = 0.70
Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 319 DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNE-PDSDVNVTDSPNRGKRIGVRF 377
D+S +D T + +S+ + ++ T+N +N P++ + + N +
Sbjct: 267 DNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNS 326
Query: 378 RSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVG 437
S P+N +S+ D +N N +SD + ++ S S + SD
Sbjct: 327 DDSK-PDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNST 385
Query: 438 QTTNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
++ ++S S NS+ Y +S+ D
Sbjct: 386 SDNSNSDNSTSDNSSSDNSNSDNSYTDNSTSD 417
Score = 30.7 bits (66), Expect = 2.8
Identities = 30/182 (16%), Positives = 72/182 (39%), Gaps = 5/182 (2%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N N ++ + D+S +D + + ++T + ++ ++N N + N
Sbjct: 50 SENSNSYNSTSDNSTSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSN 109
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
+S + + +N + +S+ D +N + + S+SD + ++
Sbjct: 110 TDNSTSNNSN-----PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSN 164
Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
S S ++ D + ++ ++S S GN + + +S+ D + TSD
Sbjct: 165 SDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNST 224
Query: 483 RE 484
+
Sbjct: 225 SD 226
Score = 30.3 bits (65), Expect = 3.7
Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTT------TAKANVLKTENDEKSNEPDSDVNVT 364
++N + +++N + T + +NST+ + ++ T+N N + +
Sbjct: 42 KKNPDNSTSENSNSYNSTSDNSTSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSD 101
Query: 365 DSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSI 424
+S + ++ PEN +++S+ + +N N S+++ S ++ +
Sbjct: 102 NSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTD 161
Query: 425 ALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
S ++ SD + ++S S NS G + +S+ D + TSD N +
Sbjct: 162 NSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSD-----NSTSDNSNSD 216
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 37.5 bits (83), Expect = 0.024
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N+ S+ N+ + +D+ +D DKT + ++ TT+ + N N+P SD +
Sbjct: 85 SDNETTSD--NDTNSDNDTTSDNDKTSDNDTTSDNDTTSDNDTTSDNNTTSYNDPTSDND 142
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
T + + +N N +D N K T ++SD + ++
Sbjct: 143 TTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNN 202
Query: 423 SIALPSHHTMSDWVGQTTNSEESS 446
+ + + T SD +T+N+ +S
Sbjct: 203 TTSY--NDTTSD-NNKTSNNNTTS 223
Score = 35.1 bits (77), Expect = 0.13
Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 5/171 (2%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
+N N+ T+ +D D D T + ++ TT+ N + N S+ N T +
Sbjct: 167 TNSDNDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNNTTSYNDTTSDNNKTSNNNTTSDND 226
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
F + +N N+++D+D + + +T + + ++ + S
Sbjct: 227 TTSDNDTTFDNDTTTDN--NKTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTS 284
Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSD 479
+ T SD T S+ + + ++D ++ D + D TSD
Sbjct: 285 NDTTSD---NDTTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSD 332
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 36.3 bits (80), Expect = 0.057
Identities = 29/165 (17%), Positives = 65/165 (39%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S + S+ N ++ S++ + +S++++ ++ + + S+ S +
Sbjct: 80 SSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 139
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
+ S + SS + + SS ++ + + +SSS S+S+
Sbjct: 140 SSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 199
Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
S + S + S ++NS SS S S +S ++ SS
Sbjct: 200 SSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSNNSSSSSSS 244
Score = 30.3 bits (65), Expect = 3.7
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 378 RSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVG 437
RSS N N SS ++ + + +SSS ++S+ S + S + S
Sbjct: 50 RSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSS 109
Query: 438 QTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
+++S SS S S +S ++ SS
Sbjct: 110 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 139
Score = 30.3 bits (65), Expect = 3.7
Identities = 24/132 (18%), Positives = 54/132 (40%)
Query: 336 NSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDF 395
++++++ ++ + + S+ S + + S + SS + + SS
Sbjct: 59 SNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSS 118
Query: 396 ANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGN 455
++ + + +SSS S+S+ S + S + S ++NS SS S S +
Sbjct: 119 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSS 178
Query: 456 SDVGFHYAADSS 467
S ++ SS
Sbjct: 179 SSSSSSSSSSSS 190
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 33.5 bits (73), Expect = 0.40
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 326 DKTPIDKVEEN-STTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPE 384
DKT + K TT A ++T+ S +P+ V ++ P + I V ++ +PE
Sbjct: 364 DKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEISVTISTQPKKAPGITVAPETTVVPE 423
Query: 385 -NVRNESSDDDFANVKNKQKKIETFQTSSSD 414
V +E++ + + E F T+ S+
Sbjct: 424 TTVASETTAETHQTTYPRDPLPEMFVTTQSN 454
>SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)
Length = 632
Score = 33.5 bits (73), Expect = 0.40
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 306 KIVSNERNEV---TAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
++V+ E +++ TAK+ + PI + E N+T T KAN + E E++N +N
Sbjct: 169 QVVTKEDHQLHLETAKEFLEEIISNLPIKREENNNTDTHKANT-QMEQPEQAN-----IN 222
Query: 363 VTDSPNR-GKRIGVRFRSSWIPENVRNESSD--DDFANVKN 400
+ SP R K I RS IP+ E + DD V+N
Sbjct: 223 KSKSPARIAKPIKGGIRSPPIPKAFETEFPELRDDDNEVQN 263
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 33.5 bits (73), Expect = 0.40
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S E N+ DD ++ D DK E AN +K+E D + P + P
Sbjct: 465 SEEANDDNNNDDGDDNYDVDGDDK-NEMEEDNGGANDVKSEEDSEIEVP-----IKTKPA 518
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
+ K+ + +S E+ ESSDD K+K+ K S S+ E S AP
Sbjct: 519 KSKK-AFKLKSDDSSED--EESSDDGPRGSKSKKHKKRCVSDSDSELEDSPVAP 569
>SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)
Length = 564
Score = 33.5 bits (73), Expect = 0.40
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 304 GNKIVSNERNEVTAKDDSANDVDKT-PIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
GN++ +++ NEV DD D D +D ++N A + + ++D++ + D DV
Sbjct: 135 GNEVDADDDNEVDDDDDDEVDTDDDGEVDADDDNKVNAADDDEMDADDDDEVDADDDDV 193
Score = 32.3 bits (70), Expect = 0.92
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
N++ ++ NEV A DD N VD T D V N+ + N +N + + D++VN T
Sbjct: 266 NEVDDDDDNEVNAADD--NVVDATDDDNV-VNADDDDEVNA-ADDNVVDATDDDNEVNAT 321
Query: 365 DSPN 368
D N
Sbjct: 322 DDDN 325
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 304 GNKIVSNERNEVTAKDDSANDV--DKTPIDKVEENSTTTAKANVLKTEND-EKSNEPDSD 360
GN++ + + NEV A DD D D +D ++N + + T++D E + D+
Sbjct: 110 GNEVDAADGNEVDADDDDEVDAADDGNEVDADDDNEVDDDDDDEVDTDDDGEVDADDDNK 169
Query: 361 VNVTD 365
VN D
Sbjct: 170 VNAAD 174
>SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)
Length = 800
Score = 33.1 bits (72), Expect = 0.53
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 317 AKDDSANDVDKTPIDKVEENSTTTAKAN-VLKTENDEKSNEPDSDVNVT-DSPNRGKRIG 374
A++DS + D +EE S TA V EN +S ++T D P G
Sbjct: 86 AEEDSPKTDSSSSSDTIEEQSGVTAPTEEVQSVENVLTKTVGESPPSITVDEPRSGGESS 145
Query: 375 VRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGE 416
V S E V NE D + ++ E+ QTSS +GE
Sbjct: 146 VVQTSVGEFELVDNEEVATDAVLEQMVAQQNESRQTSSQEGE 187
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 33.1 bits (72), Expect = 0.53
Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 318 KDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRF 377
+DDS+++ ++ P K ++ T A + D+ S++ + + + + ++ K+ +
Sbjct: 2 EDDSSDEEEEKPKKKADDKVKKT-PAKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQ 60
Query: 378 RSSWIPENVRNESSDDDFANVKNKQK---KIETFQTSSSDGECSASAPSIALPSHHTMSD 434
SS + + S +D K+K K K + + SSS S P P +S
Sbjct: 61 ESSSDDSSSDDSSDEDTKMPTKSKLKNGTKTKAKEESSSSDSSSEDEPPAKRPKSAKVSK 120
Query: 435 WVGQTTNSEESS 446
V +T + +S
Sbjct: 121 PVASSTPAVTAS 132
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 32.7 bits (71), Expect = 0.70
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 9/115 (7%)
Query: 323 NDVDKTPIDKV---EENSTTTAKANVL---KTENDEKSNEPDSDVNVTDSPNRGKRIGVR 376
+D D P+ KV EE K L K N+ + PDS+ + + ++ + R
Sbjct: 732 DDPDAPPVKKVKVEEEKDLEDIKIEKLLGGKCPNETPAAAPDSEGSTSADADKFCSMNGR 791
Query: 377 FRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHT 431
E V S+ + N Q TSSS EC ++ P HT
Sbjct: 792 IEEQQPQEGVEENKSESENNQKDNSQSSSPNGSTSSSKDECESTKEK---PEKHT 843
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 32.7 bits (71), Expect = 0.70
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
+++ +E +V +D+ +D DK ++EN+ K +V N EK NE ++ + +
Sbjct: 319 RVLRDEDGDVYNHEDTIDDGDKED-GNIDENADGFHKNDVENRSNAEKGNENENHCDGSY 377
Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQ 402
+ +IG F+ S EN ++ D V++K+
Sbjct: 378 ATKDDAKIG-DFKGS--DENYNHDDVDGTTKTVESKE 411
>SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 653
Score = 32.7 bits (71), Expect = 0.70
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 2/153 (1%)
Query: 303 SGNKIVSNE-RNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
SG NE R E DD+ ++ D D V++ +V + ++ D +
Sbjct: 249 SGGNNGDNELRGEAGDYDDADDEHDVVVDDDVDDEHDVVVDDDVDDEHDVVVDDDVDDEH 308
Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
+V + + F S IP R E +D+ + K+ K + + +SD ++
Sbjct: 309 DVVVDDDVDDDVECAFGGSTIPYPKR-EFLNDENNDTKSNASKTQQGKQENSDQNGQPNS 367
Query: 422 PSIALPSHHTMSDWVGQTTNSEESSYCSQSEGG 454
I S H + Q ++ S+ Q++ G
Sbjct: 368 KRIRALSAHQPDQFQKQQQQQQQQSFAFQTQNG 400
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 32.3 bits (70), Expect = 0.92
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 315 VTAKDDSANDVDKT-PIDKVEENSTTTAKANVLKT-ENDEKSNEPDSDVNVTDSPNRGKR 372
V+ A + DK+ P++K ++ + A L E D++ N P S V D+P+ G +
Sbjct: 312 VSCNPSIAKEHDKSMPLEKPQQTTQDAASRTKLAAREGDKERNSPSS---VPDTPSDGGK 368
Query: 373 IGVRFRSSWIPENVRNESSDDDFANV 398
F + E V E+ DD+ N+
Sbjct: 369 EMEDFSTKKKMECVEGETVDDNLTNL 394
>SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4)
Length = 692
Score = 32.3 bits (70), Expect = 0.92
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 296 KILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVE--ENSTTTAKANVLKTENDEK 353
KI + + + N+ + VT ++ A+D D+ D VE EN A + ++D+
Sbjct: 409 KIFSSTYECHLQIPNDLHVVTFVEELASDEDEFNEDDVEYIENLAKKAADHFDDEDDDDD 468
Query: 354 SNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNE---SSDDDFANVKNKQKKIETFQT 410
E + T + F+++ + RN +S + N + KQ+ E F T
Sbjct: 469 DEETPLEEYTTSIDGENMDEYIAFKTTLLALQSRNPEWYASMMNGLNNEQKQELHEVFTT 528
Query: 411 SSSDGECSASAP 422
+ +ASAP
Sbjct: 529 ADQKAAAAASAP 540
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S E E AKD DV K P+ NS + V K E D S+E +S+ +
Sbjct: 113 SEEEEEEAAKDIKKPDVQKRPL---AVNSDKSPPKKVAKVEKDSDSDEEESEEEGMELDK 169
Query: 369 RGKRIG---VRFRSSWIPENVRNESSDDD 394
+ I F+ + + SSD+D
Sbjct: 170 VKQNIYQSLFEFKGNLFDKEAEEASSDED 198
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 31.9 bits (69), Expect = 1.2
Identities = 36/147 (24%), Positives = 53/147 (36%), Gaps = 11/147 (7%)
Query: 312 RNEVTAKDDSANDVDKTPIDKVEEN--STTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
R E AK+ + +D D EN +TTTAK++V E +N NVT+ P
Sbjct: 128 RGEKLAKEGNVDDALSKGRDSASENRHTTTTAKSSVTGEERGSSTNHKGE--NVTEQPKE 185
Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIET--FQTSSSDGECSASAPSIALP 427
+ S+ IP ++ T Q+ S S S +
Sbjct: 186 ----ELEMPSAEIPPGGSTVKGSSSHVEIEQDSTTASTSRLQSDSDLNSKSLSELTDVQD 241
Query: 428 SHHTMSDWVGQTTNSE-ESSYCSQSEG 453
+ H SD G S+ E + EG
Sbjct: 242 TQHIDSDSTGVKDKSQIEEEFYDTEEG 268
>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
Length = 430
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 297 ILQARLSGNKIVSNERNEVTAKDDSANDV-DKTPIDKVEENSTTTAKANVLKTENDEKSN 355
++Q + S K+ N R++ +K D D P+ EE KA +K ++
Sbjct: 266 MVQTKKSNLKVKLNMRHQAKSKKRKHTDKEDIDPLAYYEEVKMKKMKAKEMKEMTARLAH 325
Query: 356 EPDSDVNVTDSPNRGKR-IGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
EP+ + D+ GKR I + + + + + +K K K + S
Sbjct: 326 EPEYQADEEDNGEGGKRAITYKISKNKGLTARKKKRGGNPRVKLKKKYSKAVIKRKSQIS 385
Query: 415 GECSASAPSIALP 427
GE SA+ P
Sbjct: 386 GEISANFSHFVCP 398
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 303 SGNKIVSNERNEVTAKDDSA-NDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
+ NK N+ N+ DD+ N DK D EN+ N +ND+K+++ D +
Sbjct: 83 NNNKTNDNDTNDENINDDNEKNTNDKNNNDDSNENTNDDNDKNT-NDDNDKKNDDKDKNT 141
Query: 362 N 362
N
Sbjct: 142 N 142
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
NK ++++ + T +D + D T D + N+ NDE N+ D++ N
Sbjct: 48 NKHINDDNDNKTNNNDKDTNDDNTNEDNDKNNNDDNNNKTNDNDTNDENIND-DNEKNTN 106
Query: 365 DSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
D N + +N +N + D+D N + + F +++D
Sbjct: 107 DKNNNDDS-----NENTNDDNDKNTNDDNDKKNDDKDKNTNDDFDDNTTD 151
>SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)
Length = 873
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 333 VEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG----KRIGVRFRSSWIPENVRN 388
V+ +S+ + K + K + D++ + DS N KR+ R +S+WI + +
Sbjct: 383 VKASSSCDGSVKIWKMVDQNKISSIDANDAMVDSDNDSLVATKRL--RVKSAWIDDEADD 440
Query: 389 ESSDDDFANVKNKQKKI 405
+ DD+F +++ ++++
Sbjct: 441 DDEDDEFKDIRKLKEQL 457
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 31.5 bits (68), Expect = 1.6
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
+N ++ DD ++ D D +EN ++ + +N+EK ++ D D + D +
Sbjct: 339 NNSCDDEDYDDDDVHNDDSENDD--DENDDDDDDDDISREDNEEKESDGDDDGD--DDDD 394
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDD-----FANVKNKQKKIETFQTSSSDGECSASAPS 423
+ R + P V +E SDDD F VK K+K D + A +
Sbjct: 395 NDDDVDGREAARETPRPVDDEGSDDDDVIGGFFKVKAKKKNKVHDMLQERDCSLATEAGT 454
Query: 424 IAL 426
+ L
Sbjct: 455 VGL 457
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 31.5 bits (68), Expect = 1.6
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
+A+ G ERN+ + ++ +D +VEE + + N+ DE+S E +
Sbjct: 187 KAKEEGKAEKEAERNDSSEDENKDSDAKAAQTKEVEEEEVRSNRGNL-----DEQSTEAN 241
Query: 359 SDV-NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC 417
+ V + R R + +S+ N + SDD + + +K +T SD +
Sbjct: 242 AQTKEVEEEEVRSNRGNLDEQSTEANGNNTDTHSDDSEKDSDDDEKSADTKNDEISDSDK 301
Query: 418 SASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDV 458
S + SD + + ES Y S SE + DV
Sbjct: 302 SDT-------EKDADSDSENDGSGTSESEYLS-SEESDEDV 334
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/109 (21%), Positives = 40/109 (36%)
Query: 315 VTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIG 374
V KDDS D D+ + EE+ K L E+ ++ D+N D+
Sbjct: 286 VQKKDDSVKDEDEEEESEQEEDKDEEKKVKYLTYESSDEQMYDTDDLNDDDTRGEYDDYE 345
Query: 375 VRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPS 423
R ES +D ++K ++ TS + + + + S
Sbjct: 346 EMLRKQMEEAETPTESESEDEEKPEHKPREDSEDVTSRTSSDFTLATES 394
>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 30.3 bits (65), Expect = 3.7
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
+ + ++ ++ ++V D ND D ID V+ N ++V+ +ND+ +N+ DSDV
Sbjct: 160 IDDDDVIDDDDSDVIDHVDVINDDDSDVIDDVDVNDD--GDSDVID-DNDDVNNDDDSDV 216
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 30.3 bits (65), Expect = 3.7
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
V N RN DD +D +K + + EN+ ++N + T +
Sbjct: 1531 VQNNRNNNNDDDDDDDDERNNNSNKTMDYDNNSNDGVDDNNENESRNNNDANKQQQTPAA 1590
Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
R G R +++ N N+ DDD N K ++ + +S+DG
Sbjct: 1591 TAQTRQG-RVQNN---RNNNNDEDDDDDERNNNSNKTMD-YDNNSNDG 1633
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 30.3 bits (65), Expect = 3.7
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 294 RVKILQARLSGNKIVSNERNEVTA--KDDSANDVDKTPI--DKVEENSTTTAKANVLKT- 348
+ K + + NK + E + T KD + N+ DKT DK +EN T K N KT
Sbjct: 393 KTKNKKDKTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKENKDKT-KENKDKTK 451
Query: 349 ENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENV-RNESSDDDFANVKNKQKK 404
EN +K+ E + + + EN + + + D N K+K K+
Sbjct: 452 ENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTKE 508
>SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091)
Length = 497
Score = 30.3 bits (65), Expect = 3.7
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 326 DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPEN 385
D + D ++ + + +V K ++ +K N+ S NV D + GK G I E
Sbjct: 294 DSSEEDSAKDKNDSVTNGDVNKEDDKDKENQDVSKENVNDKADDGKEDG----KGTIAEL 349
Query: 386 VRNESSDDDFANVKNKQ---KKIETFQTSSSDGECSASAPSIALPS 428
+ +D +NK KK E + D + + LP+
Sbjct: 350 DKKGEKEDGMKMQENKLRLFKKAERQVDNRCDSKAFCPTAEVVLPT 395
>SB_52671| Best HMM Match : SPAN-X (HMM E-Value=2.6)
Length = 172
Score = 30.3 bits (65), Expect = 3.7
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 347 KTENDEKSNEPDSDVN-VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKI 405
K++ +K + DS + V N G RSS + R S + +++
Sbjct: 16 KSKRSKKKKKKDSSKSCVRKESNSGSDTACEERSSKKSHSRRGTSRSTKGRSSSGQEENS 75
Query: 406 ETFQTSSSDGECSASAPSIALPSHHTMS 433
F+TSS+DG ++S+ + H T S
Sbjct: 76 TDFRTSSTDGRSTSSSAENFISPHCTNS 103
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 30.3 bits (65), Expect = 3.7
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 320 DSANDVDKTP--IDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRF 377
D ND ++ +D V + T L D+ N+ ++ V D G I V
Sbjct: 116 DEKNDKEELDAFLDSVSQPRGDTRMDRALNLAKDQLMNDENTREGVEDMD--GATIAVLG 173
Query: 378 RSSWIPE-NVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
++ + +R +SD D A + + + F +SD CSA P
Sbjct: 174 VGGYVDKFEMRQVASDPDHAFLVSNYDDLMQFVKLASDAVCSAKPP 219
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
N IV+ N+ + D+ ND D ++ + +S + + + + ++E N+ D+D N
Sbjct: 17 NDIVNENDNDNDSDSDNENDDDNDSDNENDNDSDSDNENDNVNDSDNETDNDNDNDNNNN 76
Query: 365 DS 366
D+
Sbjct: 77 DN 78
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 29.9 bits (64), Expect = 4.9
Identities = 21/138 (15%), Positives = 57/138 (41%)
Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
S N ++ N+ + + ++VD + E+N + + N N+ + + ++ N
Sbjct: 306 SNNNDNNSNNNDFNNSNRNDHNVDNNSHNNDEKNKSNSNDNNDENNNNNSNNKDSNNKSN 365
Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
D+ + + ++RN+++ + +N K+++ + T++ +A+
Sbjct: 366 NNDNKSNSNNTENNSNNDGFDNSIRNDNNAGNKSNNKDEKNNSKGTTTTTKTITTTATTT 425
Query: 423 SIALPSHHTMSDWVGQTT 440
+I T + TT
Sbjct: 426 TITTAMATTKTITAATTT 443
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.9 bits (64), Expect = 4.9
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 319 DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFR 378
D+ N +KT K+EE T K + E++E+S E + T+ N+
Sbjct: 618 DEDNNIKNKTTAKKIEEPLPRTKKPEKEEEESEEESEEESEEEEETEKVNKDALKAKATE 677
Query: 379 SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSS 413
S + E S+++ + ++++ + E + S+S
Sbjct: 678 KSNDSLCLSEEESEEEESEEESEEDEEEGAKPSAS 712
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 313 NEVTAKDDSANDVDKTP--------IDKVE--ENSTTTAKANVLKTENDEKSNEPDSDVN 362
+E T + D + + D TP +++ E E+S +AN L E ++ PD +
Sbjct: 296 HEATDEPDRSQEADDTPDRPQKEADVEEAEEAEDSDELDEANELPNRTQESTDTPDKPLE 355
Query: 363 VTDSPNRGKRI 373
T +P R +R+
Sbjct: 356 STHAPERPQRL 366
Score = 29.5 bits (63), Expect = 6.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTA--KANVLKTENDEKSNEPDSDVNVTDSPNR 369
E T D +V TP E N + N + E +N PD VTDSP+R
Sbjct: 117 ETTDVPDRPQEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDR 174
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTEND---EKSNEPDSDVNVTDSPNRG 370
EVT D + D P D+ +E + + ++ E D E ++EPD TD P R
Sbjct: 167 EVTDSPDRLQEEDDAP-DRPQEATDESDRSQEATDEPDRSHEATDEPDRPQETTDVPGRS 225
Query: 371 KRI 373
+ +
Sbjct: 226 QEV 228
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.9 bits (64), Expect = 4.9
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
S+ER+++ AK + + + + +EE ST ++ L++ + + ++ +
Sbjct: 3144 SDERDDLKAKLEETEETLASTKENLEETSTKLSETEKLRSSEVSERDSSIEELRTNNENL 3203
Query: 369 RG--KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
RG KR FR + I + E ++ K++ + + D A A
Sbjct: 3204 RGDLKRTKESFREACIENSDLREKLSVTEEKLERVDAKLQELENDNVDALAEAQA 3258
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.9 bits (64), Expect = 4.9
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 301 RLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEE--NSTTTAKANVLKTENDEKSNEPD 358
+ +G++ E+N+VT + S + P+ V + N+ + K + + E D
Sbjct: 489 KCTGDRSDKKEKNDVTG-EPSPGPSTRLPLSHVTDYNNNKVSEKKCSISQNTNTVEREQD 547
Query: 359 SDVNVT--DSPNR-GK----RIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
++V +SP+ GK RI V S P+ S+ DF K+ + +
Sbjct: 548 AEVMSAFENSPSPDGKVDETRISVSEPGSPYPQRNAKLSAVSDFYRPVTPIKRSPSTSSV 607
Query: 412 SSDGECSAS 420
+S+GEC +S
Sbjct: 608 NSEGECKSS 616
>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
Length = 696
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 9/55 (16%)
Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTEN--DEKSNEPDSD 360
+S +N + +DDS +D+ E N++TT + N +KT+N DE+ N+P +D
Sbjct: 22 LSARQNNIL-EDDSQSDITS------EINTSTTEQNNKIKTQNHDDEEKNDPLND 69
>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
Length = 607
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNE 356
NK+ + N+VT K AN+V DKV N T NV +E +N+
Sbjct: 7 NKVANKVTNKVTNK--VANNVTNKVTDKVTRNVTNKVTNNVTNKVTNEVTNK 56
>SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.5 bits (63), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 320 DSANDVDKTPI---DKVEENSTTTAKANVLKTEN-DEKSNEPDSDVNVTDSPN 368
D +N DKT + V + S T K+N++ N +K+N D NVTD N
Sbjct: 2 DKSNVTDKTNVTDGSNVTDRSNVTDKSNMMDKSNVTDKTNVTDGS-NVTDKSN 53
>SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.5 bits (63), Expect = 6.5
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 8/45 (17%)
Query: 318 KDDSANDVDKTPIDKVEENSTTTAKANVLKTEN--DEKSNEPDSD 360
+DDS +D+ E N++TT + N +KT+N DE+ N+P +D
Sbjct: 6 EDDSQSDITS------EINTSTTEQNNKIKTQNHDDEEKNDPLND 44
>SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7)
Length = 427
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRI 373
EV+AK D++ K P++ +EE + K E + S + D + ++ P +
Sbjct: 316 EVSAKLDASTSQGKVPVEALEELTCQDKKRGTYSLE--DVSEKLDEVLAISPRPEKRGTY 373
Query: 374 GVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSS 412
G+ S + E+ ++ DD + + I T++ SS
Sbjct: 374 GLEDVSKKLDESGQSTKVLDDISRAFS-NPDISTYRDSS 411
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 29.5 bits (63), Expect = 6.5
Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 2/159 (1%)
Query: 311 ERNEVTAKDDSANDVD--KTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
E+ E + A D+D KT +D+ + + E ++SN + + ++
Sbjct: 416 EQLESVQSQEEAMDLDEKKTVVDQRALIESQAGNQVAMNVEVKQESNGNEEEERISKVEV 475
Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
+ +++G + + + +S N +K + TF S + S PS + +
Sbjct: 476 KVEKVGEVEILEKNDKAILSGNSKTTTCNASDKNSSVITFTPSDEGSKVVPSVPSDSDSN 535
Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
+ V E + S E +DV A ++
Sbjct: 536 VQSSKTVVSTVLEVESKNVSSTEESSKADVNITVGASTT 574
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 347 KTENDEKSNEPDSDVNVTD---SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQK 403
K E D+ S V TD SPNR +G RSS +P V +S DD + +
Sbjct: 2952 KIETDQISPMSLDKVYATDQHSSPNRAPSLGKMARSSTLPNPVITVTSFDD---EDDYDE 3008
Query: 404 KIETFQTSSSDGECSA 419
+ + SDGE SA
Sbjct: 3009 NVNDY--DDSDGEISA 3022
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 336 NSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDF 395
NS+ + + V + E+DE +N ++D D P R ++ R + + +R + + +
Sbjct: 114 NSSDSGNSEVTEQEHDEDANSEEND----DKPTRKTKLDKAQRK--LNKRLRQKKKNKNV 167
Query: 396 ANVKNKQKKIE 406
AN + ++K++
Sbjct: 168 ANGEENERKVK 178
>SB_3273| Best HMM Match : Neuromodulin (HMM E-Value=1.9)
Length = 457
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
+ER T K DS D+T D +N+ TTA +D+ +EP + T SP
Sbjct: 332 SERYRKTTKKDSELQTDETTKDTQRQNTDTTA--------SDKTDDEPTVSSHDT-SPRT 382
Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
K G+ S++ P+ E D+ ++ + + +++
Sbjct: 383 QKETGLTGLSNF-PDG--TEEEDEAYSTMPSSERE 414
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 398 VKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
V+ K K E +TSS+ G P+ S +++S SSY S S G+S
Sbjct: 978 VRRKDKDKEK-RTSSTRGRSPTRKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSS 1036
Query: 458 VGFHYAADSS 467
G ++ SS
Sbjct: 1037 SGSSRSSSSS 1046
>SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
R K + R SGN +S+ RN+ K S+ +++ + ++ ++ N+ N++
Sbjct: 61 RNKYDKQRSSGNMNISSNRNKYD-KQRSSGNMNISSNRNNDDKQRSSGNMNISSNRNNDD 119
Query: 354 SNEPDSDVNVTDSPNRGKR 372
++N++ + N+ +
Sbjct: 120 KQRSSGNMNISSNRNKNDK 138
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTE-NDEKSNEPDSD 360
L+ + + S++ + D++N D + DK++ +++ + K N ++ N+ S+ +SD
Sbjct: 23 LNSDNLNSDKLKSDNSNSDNSNS-DNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDNSNSD 81
Query: 361 VNVTDSPNRGKRIGVRFR-SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
+ +D+ N K V + + ++ +S+ D N N S+SD S
Sbjct: 82 NSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNSNSDKLNSDNSNSDNSNSDNSNSDNSNS 140
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,836,796
Number of Sequences: 59808
Number of extensions: 583305
Number of successful extensions: 2012
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1908
Number of HSP's gapped (non-prelim): 113
length of query: 495
length of database: 16,821,457
effective HSP length: 85
effective length of query: 410
effective length of database: 11,737,777
effective search space: 4812488570
effective search space used: 4812488570
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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