Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40069
(752 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W252 Cluster: DNA repair protein RAD50; n=3; Sophopho... 101 1e-20
UniRef50_Q7QAJ3 Cluster: ENSANGP00000020218; n=4; Culicidae|Rep:... 100 8e-20
UniRef50_A5D6Y3 Cluster: RAD50 protein; n=9; Eutheria|Rep: RAD50... 96 7e-19
UniRef50_Q92878 Cluster: DNA repair protein RAD50; n=37; Euteleo... 96 7e-19
UniRef50_Q6C910 Cluster: Similar to sp|P12753 Saccharomyces cere... 93 9e-18
UniRef50_Q2HCY4 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q0U227 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_A3GHA0 Cluster: DNA repair protein; n=3; Saccharomyceta... 89 1e-16
UniRef50_P12753 Cluster: DNA repair protein RAD50; n=10; Sacchar... 87 3e-16
UniRef50_UPI0000D56574 Cluster: PREDICTED: similar to RAD50 homo... 85 1e-15
UniRef50_Q9C499 Cluster: UVS6; n=7; Fungi|Rep: UVS6 - Neurospora... 85 1e-15
UniRef50_Q54CS9 Cluster: DNA recombination/repair protein; n=1; ... 85 2e-15
UniRef50_Q384J8 Cluster: RAD50 DNA repair-like protein; n=4; Try... 85 2e-15
UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 ... 84 4e-15
UniRef50_Q8SRK6 Cluster: RAD50-LIKE DNA REPAIR PROTEIN; n=1; Enc... 84 4e-15
UniRef50_A5DBJ4 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_Q01GV4 Cluster: DNA repair-recombination protein; n=4; ... 83 5e-15
UniRef50_Q6BRD1 Cluster: Similar to CA1045|IPF11620 Candida albi... 83 5e-15
UniRef50_Q1EA29 Cluster: Putative uncharacterized protein; n=1; ... 83 9e-15
UniRef50_Q9UTJ8 Cluster: DNA repair protein rad50; n=1; Schizosa... 83 9e-15
UniRef50_Q4Q8L7 Cluster: RAD50 DNA repair-like protein; n=3; Lei... 82 2e-14
UniRef50_Q4PFM8 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_A4RMW2 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_A3A742 Cluster: Putative uncharacterized protein; n=3; ... 81 3e-14
UniRef50_A2X530 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_A7APR9 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q9SL02 Cluster: DNA repair protein RAD50; n=4; Magnolio... 79 2e-13
UniRef50_A1CII9 Cluster: DNA repair protein Rad50; n=9; Eurotiom... 76 8e-13
UniRef50_UPI00015B47B3 Cluster: PREDICTED: similar to LP09268p; ... 75 1e-12
UniRef50_A5K1Q6 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A6RN20 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q4UDL2 Cluster: DNA repair protein rad50, putative; n=1... 71 4e-11
UniRef50_O44199 Cluster: DNA repair protein rad-50; n=3; Caenorh... 70 7e-11
UniRef50_A7F2U1 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q4N5Y3 Cluster: RAD50 DNA repair protein, putative; n=1... 69 1e-10
UniRef50_Q7RRU1 Cluster: Unnamed protein product; n=7; Plasmodiu... 68 2e-10
UniRef50_Q6LFK8 Cluster: DNA repair protein RAD50, putative; n=1... 66 7e-10
UniRef50_UPI0000499464 Cluster: DNA repair protein Rad50; n=1; E... 65 2e-09
UniRef50_Q5K749 Cluster: Telomere maintenance protein, putative;... 64 5e-09
UniRef50_A2FAD3 Cluster: Putative uncharacterized protein; n=1; ... 63 8e-09
UniRef50_A2FAC7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_UPI00005866FD Cluster: PREDICTED: similar to RAD50 prot... 59 1e-07
UniRef50_A0CV46 Cluster: Chromosome undetermined scaffold_29, wh... 55 2e-06
UniRef50_A7RWC6 Cluster: Predicted protein; n=1; Nematostella ve... 53 7e-06
UniRef50_UPI0000E47056 Cluster: PREDICTED: hypothetical protein;... 53 9e-06
UniRef50_Q2S457 Cluster: Chromosome segregation protein SMC; n=1... 48 2e-04
UniRef50_A1S5R5 Cluster: SMC family protein; n=7; Shewanella|Rep... 46 0.001
UniRef50_A1ZE63 Cluster: Chromosome segregation protein SMC; n=1... 44 0.004
UniRef50_Q84F12 Cluster: SMC protein; n=4; Flexibacteraceae|Rep:... 44 0.005
UniRef50_A0A3H2 Cluster: Putative cobalt transporter; n=3; Lacto... 42 0.012
UniRef50_Q2ACW4 Cluster: GTP-binding:Chromosome segregation prot... 42 0.016
UniRef50_Q3ATI3 Cluster: Chromosome segregation protein SMC; n=1... 42 0.022
UniRef50_Q41DQ3 Cluster: Exonuclease, SbcC family; n=1; Exiguoba... 41 0.029
UniRef50_Q1JZN4 Cluster: Chromosome segregation protein SMC; n=1... 41 0.029
UniRef50_A6GK48 Cluster: Chromosome segregation protein SMC; n=1... 41 0.029
UniRef50_A4XJX6 Cluster: Chromosome segregation protein SMC; n=1... 41 0.029
UniRef50_Q8KBS6 Cluster: SMC family protein; n=9; Chlorobiaceae|... 41 0.038
UniRef50_Q88WJ9 Cluster: Cell division protein Smc; n=1; Lactoba... 41 0.038
UniRef50_Q5YQP2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.038
UniRef50_Q7BB52 Cluster: SMC protein; n=6; Lactococcus lactis|Re... 41 0.038
UniRef50_Q6M230 Cluster: ABC-type transport system, ATPase compo... 41 0.038
UniRef50_Q0C0X5 Cluster: Chromosome segregation protein SMC; n=1... 40 0.050
UniRef50_O83382 Cluster: Chromosome segregation protein, putativ... 40 0.066
UniRef50_Q11AI5 Cluster: SMC protein-like; n=1; Mesorhizobium sp... 40 0.066
UniRef50_A7CUX0 Cluster: SMC domain protein; n=1; Opitutaceae ba... 40 0.066
UniRef50_Q6WD96 Cluster: Rad50; n=2; Giardia intestinalis|Rep: R... 40 0.066
UniRef50_Q5WHZ4 Cluster: ABC transporter ATP-binding protein; n=... 40 0.087
UniRef50_Q9HLR8 Cluster: DNA double-strand break repair rad50 AT... 40 0.087
UniRef50_Q5FPF7 Cluster: Chromosome partition protein Smc; n=3; ... 39 0.12
UniRef50_Q4FPF1 Cluster: Chromosome segregation protein SMC fami... 39 0.12
UniRef50_Q3A212 Cluster: Chromosome segregation SMC protein; n=2... 39 0.12
UniRef50_Q0EWN2 Cluster: Chromosome segregation SMC protein, put... 39 0.12
UniRef50_A0NL27 Cluster: Chromosome segregation SMC protein; n=2... 39 0.12
UniRef50_Q6L2H8 Cluster: DNA repair protein Rad50; n=1; Picrophi... 39 0.12
UniRef50_A7I567 Cluster: SMC protein-like protein; n=1; Candidat... 39 0.12
UniRef50_Q9CFZ0 Cluster: Nuclease sbcCD subunit C; n=3; Lactococ... 39 0.12
UniRef50_Q73ML2 Cluster: Chromosome partition protein SmC, putat... 39 0.15
UniRef50_Q5ZS99 Cluster: Chromosome segregation SMC protein; n=4... 39 0.15
UniRef50_Q21JJ0 Cluster: Chromosome segregation protein SMC; n=1... 39 0.15
UniRef50_UPI0000DAE66B Cluster: hypothetical protein Rgryl_01000... 38 0.20
UniRef50_Q6MNS9 Cluster: Chromosome segregation SMC protein; n=1... 38 0.20
UniRef50_Q1QDX0 Cluster: SMC protein-like; n=4; Gammaproteobacte... 38 0.20
UniRef50_Q0AYV7 Cluster: Chromosome segregation SMC protein; n=1... 38 0.20
UniRef50_A6FI30 Cluster: Chromosome segregation ATPase, sms; n=1... 38 0.20
UniRef50_P58302 Cluster: DNA double-strand break repair rad50 AT... 38 0.20
UniRef50_Q8RCY8 Cluster: ATPase involved in DNA repair; n=3; The... 38 0.27
UniRef50_Q84EX7 Cluster: SMC protein; n=5; Geobacter|Rep: SMC pr... 38 0.27
UniRef50_Q7ZAJ7 Cluster: SMC family protein; n=11; Shewanella|Re... 38 0.27
UniRef50_Q5SJV3 Cluster: Chromosome segregation SMC protein; n=2... 38 0.27
UniRef50_Q1PZG8 Cluster: Similar to structural maintenance of ch... 38 0.27
UniRef50_Q1D2R5 Cluster: Chromosome segregation protein SMC; n=1... 38 0.27
UniRef50_Q16C15 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_Q15UZ3 Cluster: Chromosome segregation protein SMC; n=1... 38 0.27
UniRef50_Q0BQZ0 Cluster: Chromosome partition protein smc; n=1; ... 38 0.27
UniRef50_A5WCN1 Cluster: SMC domain protein; n=1; Psychrobacter ... 38 0.27
UniRef50_O29230 Cluster: DNA double-strand break repair rad50 AT... 38 0.27
UniRef50_Q9PR04 Cluster: P115 protein; n=1; Ureaplasma parvum|Re... 38 0.35
UniRef50_Q3XYC2 Cluster: Exonuclease SbcC; n=2; cellular organis... 38 0.35
UniRef50_Q1GQU3 Cluster: Chromosome segregation protein SMC; n=7... 38 0.35
UniRef50_A4XDL1 Cluster: ABC transporter related; n=3; Bacteria|... 38 0.35
UniRef50_A3WLJ3 Cluster: Exonuclease SbcC, putative; n=1; Idioma... 38 0.35
UniRef50_A0WCV8 Cluster: Chromosome segregation protein SMC; n=2... 38 0.35
UniRef50_UPI0000510427 Cluster: COG1196: Chromosome segregation ... 37 0.46
UniRef50_Q89U26 Cluster: Bll1593 protein; n=1; Bradyrhizobium ja... 37 0.46
UniRef50_Q82J56 Cluster: Putative uncharacterized protein; n=1; ... 37 0.46
UniRef50_Q6MB38 Cluster: Putative chromosome segregation SMC pro... 37 0.46
UniRef50_Q18BB2 Cluster: Chromosome partition protein; n=3; Clos... 37 0.46
UniRef50_A7H886 Cluster: Chromosome segregation protein SMC; n=2... 37 0.46
UniRef50_A5W4N1 Cluster: ATPase involved in DNA repair-like prot... 37 0.46
UniRef50_A4J5A9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.46
UniRef50_A4F8B2 Cluster: Putative ATP-dependent dsDNA exonucleas... 37 0.46
UniRef50_A3VKW1 Cluster: Putative uncharacterized protein; n=2; ... 37 0.46
UniRef50_A1S519 Cluster: Exonuclease SbcC, putative; n=1; Shewan... 37 0.46
UniRef50_A0HJB9 Cluster: SMC protein-like; n=1; Comamonas testos... 37 0.46
UniRef50_Q8K4R1 Cluster: Barmotin; n=2; cellular organisms|Rep: ... 37 0.61
UniRef50_Q5LNH7 Cluster: SMC protein; n=29; Bacteria|Rep: SMC pr... 37 0.61
UniRef50_Q48MS3 Cluster: ATP binding protein; n=1; Pseudomonas s... 37 0.61
UniRef50_Q252K0 Cluster: DNA replication and repair protein recF... 37 0.61
UniRef50_A5EVD4 Cluster: Chromosome segregation SMC family prote... 37 0.61
UniRef50_A4B6B5 Cluster: Chromosome segregation ATPase, sms; n=1... 37 0.61
UniRef50_A1ICT1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.61
UniRef50_A0KHL7 Cluster: Chromosome segregation protein SMC; n=2... 37 0.61
UniRef50_A7DNR0 Cluster: SMC domain protein; n=1; Candidatus Nit... 37 0.61
UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.81
UniRef50_Q9WZ07 Cluster: Putative uncharacterized protein; n=2; ... 36 0.81
UniRef50_Q830T3 Cluster: Exonuclease SbcC; n=1; Enterococcus fae... 36 0.81
UniRef50_Q6HMN5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.81
UniRef50_Q6FDW2 Cluster: Putative chromosome segregation ATPases... 36 0.81
UniRef50_Q2RM30 Cluster: Putative uncharacterized protein; n=1; ... 36 0.81
UniRef50_O50349 Cluster: Putative uncharacterized protein orf-49... 36 0.81
UniRef50_A7CRM1 Cluster: AAA ATPase; n=1; Opitutaceae bacterium ... 36 0.81
UniRef50_A1IE18 Cluster: Chromosome segregation protein SMC; n=1... 36 0.81
UniRef50_A6UUX2 Cluster: SMC domain protein; n=1; Methanococcus ... 36 0.81
UniRef50_UPI000038E4E1 Cluster: hypothetical protein Faci_030006... 36 1.1
UniRef50_Q5YQ97 Cluster: Putative ATP-dependent dsDNA exonucleas... 36 1.1
UniRef50_Q3IKC0 Cluster: Putative SMC family protein; n=2; Alter... 36 1.1
UniRef50_Q38UV7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q03FW9 Cluster: Chromosome segregation ATPase; n=1; Ped... 36 1.1
UniRef50_A6NVW8 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_A5FGE6 Cluster: AAA ATPase; n=1; Flavobacterium johnson... 36 1.1
UniRef50_A4CFQ6 Cluster: Putative SMC family protein; n=1; Pseud... 36 1.1
UniRef50_A3VYF2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A1ZW09 Cluster: ATPase involved in DNA repair, putative... 36 1.1
UniRef50_A0YK44 Cluster: ATP/GTP-binding protein; n=1; Lyngbya s... 36 1.1
UniRef50_A0KYG9 Cluster: Exonuclease SbcC, putative; n=15; Shewa... 36 1.1
UniRef50_Q2NFC5 Cluster: DNA double-strand break repair protein ... 36 1.1
UniRef50_A5UJE7 Cluster: Purine NTPase involved in DNA repair, R... 36 1.1
UniRef50_O26640 Cluster: DNA double-strand break repair rad50 AT... 36 1.1
UniRef50_Q6AXE3 Cluster: Abca3 protein; n=10; Tetrapoda|Rep: Abc... 36 1.4
UniRef50_Q46YP7 Cluster: Putative uncharacterized protein; n=2; ... 36 1.4
UniRef50_Q38ZD2 Cluster: Putative DNA-repair ATPase; n=1; Lactob... 36 1.4
UniRef50_Q1QZQ0 Cluster: Chromosome segregation protein SMC; n=3... 36 1.4
UniRef50_Q0AMJ6 Cluster: Chromosome segregation protein SMC; n=2... 36 1.4
UniRef50_Q0AAV4 Cluster: Chromosome segregation protein SMC; n=2... 36 1.4
UniRef50_A5VKD5 Cluster: AAA ATPase; n=1; Lactobacillus reuteri ... 36 1.4
UniRef50_A4ILD6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A3KWT1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A0Z2Y7 Cluster: Recombination protein F; n=1; marine ga... 36 1.4
UniRef50_Q9VRG4 Cluster: CG1718-PA; n=3; Sophophora|Rep: CG1718-... 36 1.4
UniRef50_Q9KM67 Cluster: Nuclease sbcCD subunit C; n=17; Vibrio ... 36 1.4
UniRef50_Q8R420 Cluster: ATP-binding cassette sub-family A membe... 36 1.4
UniRef50_UPI0000ECD324 Cluster: helicase (DNA) B; n=2; Gallus ga... 35 1.9
UniRef50_Q4SGQ6 Cluster: Chromosome 3 SCAF14593, whole genome sh... 35 1.9
UniRef50_Q4L5T6 Cluster: Chromosome segregation SMC protein; n=1... 35 1.9
UniRef50_Q0S3U8 Cluster: ABC transporter, ATP-binding component;... 35 1.9
UniRef50_Q6WAV5 Cluster: HmcB; n=2; Pasteurellaceae|Rep: HmcB - ... 35 1.9
UniRef50_Q1FFM8 Cluster: ABC transporter related; n=1; Clostridi... 35 1.9
UniRef50_Q1CW77 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A5FVJ2 Cluster: Chromosome segregation protein SMC; n=1... 35 1.9
UniRef50_A5EI89 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A0LM48 Cluster: SMC domain protein; n=1; Syntrophobacte... 35 1.9
UniRef50_Q56BZ3 Cluster: Gp46 recombination endonuclease subunit... 35 1.9
UniRef50_Q0QZ77 Cluster: Gp151; n=2; Myoviridae|Rep: Gp151 - Pha... 35 1.9
UniRef50_A7RPD5 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.9
UniRef50_Q5V611 Cluster: Putrescine ABC transporter ATP-binding ... 35 1.9
UniRef50_O83635 Cluster: Nuclease sbcCD subunit C; n=1; Treponem... 35 1.9
UniRef50_P62135 Cluster: DNA double-strand break repair rad50 AT... 35 1.9
UniRef50_UPI000069DF78 Cluster: ATP-binding cassette sub-family ... 35 2.5
UniRef50_Q8ZL33 Cluster: ATP binding protein,; n=4; Enterobacter... 35 2.5
UniRef50_Q84HH3 Cluster: SMC protein; n=1; Acidithiobacillus fer... 35 2.5
UniRef50_Q3W787 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q187H6 Cluster: Putative conjugative transposon DNA rec... 35 2.5
UniRef50_Q03B98 Cluster: DNA repair ATPase; n=1; Lactobacillus c... 35 2.5
UniRef50_A7HMS6 Cluster: DNA replication and repair protein RecF... 35 2.5
UniRef50_A6VY51 Cluster: SMC domain protein; n=23; cellular orga... 35 2.5
UniRef50_A6P234 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A6D4U6 Cluster: Exonuclease SbcC, putative; n=1; Vibrio... 35 2.5
UniRef50_A5VKP1 Cluster: Chromosome segregation protein SMC; n=2... 35 2.5
UniRef50_A5ISM9 Cluster: ATPase involved in DNA repair-like prot... 35 2.5
UniRef50_A2UXY4 Cluster: Putative phage protein; n=1; Shewanella... 35 2.5
UniRef50_A0YBB3 Cluster: Exonuclease SbcC, putative; n=1; marine... 35 2.5
UniRef50_A0Q5B6 Cluster: (Putative) drug resistance ATPase-1 (Dr... 35 2.5
UniRef50_Q54V69 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q16LB5 Cluster: ATP-binding cassette sub-family A membe... 35 2.5
UniRef50_A0B983 Cluster: SMC domain protein; n=1; Methanosaeta t... 35 2.5
UniRef50_Q58718 Cluster: DNA double-strand break repair rad50 AT... 35 2.5
UniRef50_Q9YFZ1 Cluster: DNA double-strand break repair rad50 AT... 35 2.5
UniRef50_UPI0000E88036 Cluster: Chromosome segregation protein S... 34 3.3
UniRef50_Q982W4 Cluster: ABC transporter, ATP-binding protein; n... 34 3.3
UniRef50_Q894V4 Cluster: Transporter; n=10; cellular organisms|R... 34 3.3
UniRef50_Q81GE4 Cluster: ATP/GTP-binding protein; n=1; Bacillus ... 34 3.3
UniRef50_Q6M231 Cluster: ABC-type transport system, ATPase compo... 34 3.3
UniRef50_Q3W3E7 Cluster: SMC protein, N-terminal:Structural main... 34 3.3
UniRef50_Q0LWW6 Cluster: SMC protein-like; n=2; Alphaproteobacte... 34 3.3
UniRef50_A7BQ65 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A6NVD9 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_A4A3A3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A1K1W2 Cluster: Exonuclease SbcC, putative; n=1; Azoarc... 34 3.3
UniRef50_A0JVY1 Cluster: ABC transporter related precursor; n=1;... 34 3.3
UniRef50_Q9P139 Cluster: PRO2958; n=1; Homo sapiens|Rep: PRO2958... 34 3.3
UniRef50_Q8SQJ6 Cluster: CHROMOSOME SEGREGATION PROTEIN OF THE S... 34 3.3
UniRef50_O06714 Cluster: Nuclease sbcCD subunit C; n=3; Bacillus... 34 3.3
UniRef50_Q4H4D7 Cluster: ATP-binding cassette (ABC) transporter ... 34 4.3
UniRef50_Q8YFT1 Cluster: CHROMOSOME SEGREGATION PROTEIN SMC2; n=... 34 4.3
UniRef50_Q89PU7 Cluster: ABC transporter permease protein; n=4; ... 34 4.3
UniRef50_Q89P52 Cluster: ABC transporter ATP-binding protein; n=... 34 4.3
UniRef50_Q81ZL2 Cluster: SMC protein; n=4; Coxiella burnetii|Rep... 34 4.3
UniRef50_Q5SIS6 Cluster: Exonuclease SbcC; n=2; Thermus thermoph... 34 4.3
UniRef50_Q5F6V2 Cluster: Putative uncharacterized protein; n=4; ... 34 4.3
UniRef50_Q3A800 Cluster: ABC-type transport system, ATPase compo... 34 4.3
UniRef50_Q2YBB9 Cluster: Chromosome segregation protein SMC; n=1... 34 4.3
UniRef50_Q2IEJ2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_O51074 Cluster: P115 protein; n=3; Borrelia burgdorferi... 34 4.3
UniRef50_Q1QGW5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q0S485 Cluster: ATP-dependent dsDNA exonuclease SbcC; n... 34 4.3
UniRef50_Q0RZ01 Cluster: Monosaccharide-transporting ATPase; n=1... 34 4.3
UniRef50_Q025B4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A7HCA0 Cluster: DNA repair exonuclease, SbcC; n=1; Anae... 34 4.3
UniRef50_A1GBL7 Cluster: ABC transporter related; n=1; Salinispo... 34 4.3
UniRef50_A0LTA1 Cluster: ABC transporter related precursor; n=1;... 34 4.3
UniRef50_A0L7C6 Cluster: Putative uncharacterized protein; n=3; ... 34 4.3
UniRef50_Q7YYW8 Cluster: Restin, possible; n=3; Cryptosporidium|... 34 4.3
UniRef50_Q54UZ4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A2FD36 Cluster: Viral A-type inclusion protein, putativ... 34 4.3
UniRef50_A3CVZ6 Cluster: SMC domain protein; n=1; Methanoculleus... 34 4.3
UniRef50_Q99758 Cluster: ATP-binding cassette sub-family A membe... 34 4.3
UniRef50_UPI0000D573D3 Cluster: PREDICTED: similar to CG1718-PA;... 33 5.7
UniRef50_Q9RP51 Cluster: Structural maintenance of chromosomes p... 33 5.7
UniRef50_Q9PAG0 Cluster: Chromosome segregation protein; n=12; X... 33 5.7
UniRef50_Q82J52 Cluster: Putative uncharacterized protein; n=3; ... 33 5.7
UniRef50_Q39IV9 Cluster: ABC branched-chain amino acid family tr... 33 5.7
UniRef50_Q2IEM8 Cluster: OLD family-like ATP-dependent endonucle... 33 5.7
UniRef50_Q3VLI0 Cluster: Conserved hypothetical ATP-binding prot... 33 5.7
UniRef50_Q1WSF5 Cluster: Exonuclease; n=1; Lactobacillus salivar... 33 5.7
UniRef50_Q15HV3 Cluster: TcpA; n=3; Clostridium perfringens|Rep:... 33 5.7
UniRef50_Q0LQS6 Cluster: ATPase; n=1; Herpetosiphon aurantiacus ... 33 5.7
UniRef50_Q0K4S7 Cluster: DNA repair exonuclease, SbcC; n=3; Cupr... 33 5.7
UniRef50_A6WB39 Cluster: SMC domain protein; n=1; Kineococcus ra... 33 5.7
UniRef50_A6Q5M3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A6LTW3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A6LFY6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A6AAK9 Cluster: RecF/RecN/SMC N domain protein; n=1; Vi... 33 5.7
UniRef50_A5KNT8 Cluster: Putative uncharacterized protein; n=3; ... 33 5.7
UniRef50_A4T2Z8 Cluster: ABC transporter related; n=1; Mycobacte... 33 5.7
UniRef50_A4J7M7 Cluster: SMC domain protein; n=1; Desulfotomacul... 33 5.7
UniRef50_A3ECT4 Cluster: ATPase involved in DNA repair; n=10; Pr... 33 5.7
UniRef50_Q4QGV3 Cluster: ABC transporter, putative; n=3; Leishma... 33 5.7
UniRef50_Q29I59 Cluster: GA13367-PA; n=1; Drosophila pseudoobscu... 33 5.7
UniRef50_A2FLV9 Cluster: Viral A-type inclusion protein, putativ... 33 5.7
UniRef50_A0C5L2 Cluster: Chromosome undetermined scaffold_150, w... 33 5.7
UniRef50_Q5UY17 Cluster: Branched-chain amino acid ABC transport... 33 5.7
UniRef50_A4YET5 Cluster: SMC domain protein; n=1; Metallosphaera... 33 5.7
UniRef50_A1RUX7 Cluster: ABC transporter related; n=1; Pyrobacul... 33 5.7
UniRef50_Q8YYE3 Cluster: Phosphate import ATP-binding protein ps... 33 5.7
UniRef50_Q9UUE5 Cluster: Nucleoporin nup85; n=1; Schizosaccharom... 33 5.7
UniRef50_UPI0000F2DCE5 Cluster: PREDICTED: similar to ABC-C tran... 33 7.6
UniRef50_Q8UDH2 Cluster: ABC transporter, nucleotide binding/ATP... 33 7.6
UniRef50_Q8D7R9 Cluster: ATPase involved in DNA repair; n=8; Vib... 33 7.6
UniRef50_Q650N2 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_Q4A6T0 Cluster: Putative ATP/GTP-binding protein; n=2; ... 33 7.6
UniRef50_Q4A664 Cluster: Oligopeptide ABC transporter ATP-bindin... 33 7.6
UniRef50_Q3ADF0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q2IEH8 Cluster: ATP-dependent endonuclease of the OLD f... 33 7.6
UniRef50_O05450 Cluster: POSSIBLE CONSERVED MEMBRANE PROTEIN; n=... 33 7.6
UniRef50_Q50FV2 Cluster: Cj81-069; n=4; Campylobacter jejuni|Rep... 33 7.6
UniRef50_Q1Q7S9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q1FMZ6 Cluster: SMC protein-like; n=1; Clostridium phyt... 33 7.6
UniRef50_A7B251 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A6TQ43 Cluster: MukB N-terminal domain/M protein repeat... 33 7.6
UniRef50_A6LLZ4 Cluster: ATPase involved in DNA repair-like prot... 33 7.6
UniRef50_A6LLE9 Cluster: Chromosome segregation protein SMC; n=1... 33 7.6
UniRef50_A6DE83 Cluster: SMC domain protein; n=1; Caminibacter m... 33 7.6
UniRef50_A6C413 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A4SC23 Cluster: DNA replication and repair protein RecF... 33 7.6
UniRef50_A3VNV6 Cluster: Chromosome segregation protein; n=1; Pa... 33 7.6
UniRef50_A3HXK2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A3GLY1 Cluster: ATP/GTP-binding protein; n=1; Vibrio ch... 33 7.6
UniRef50_A1TSH7 Cluster: SMC domain protein; n=1; Acidovorax ave... 33 7.6
UniRef50_Q5ULP4 Cluster: Orf70; n=1; Lactobacillus phage LP65|Re... 33 7.6
UniRef50_Q8IK87 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_Q54R74 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q235M0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A0CVB6 Cluster: Chromosome undetermined scaffold_29, wh... 33 7.6
UniRef50_Q6G194 Cluster: sn-glycerol-3-phosphate import ATP-bind... 33 7.6
UniRef50_P73532 Cluster: DNA replication and repair protein recF... 33 7.6
UniRef50_Q8FUL4 Cluster: DNA replication and repair protein recF... 33 7.6
UniRef50_UPI000155C584 Cluster: PREDICTED: similar to helicase B... 33 10.0
UniRef50_UPI0000E47CD9 Cluster: PREDICTED: similar to ENSANGP000... 33 10.0
UniRef50_UPI0000D573D4 Cluster: PREDICTED: similar to CG1718-PA;... 33 10.0
UniRef50_UPI00006CB2FB Cluster: HMG box family protein; n=1; Te... 33 10.0
UniRef50_Q8YML4 Cluster: Alr4919 protein; n=7; Cyanobacteria|Rep... 33 10.0
UniRef50_Q8R8G8 Cluster: ATPase involved in DNA repair; n=1; The... 33 10.0
UniRef50_Q8F1N5 Cluster: Treponemal membrane protein B-like prot... 33 10.0
UniRef50_Q8CQY5 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_Q8CPC5 Cluster: Exonuclease SbcC; n=2; Staphylococcus e... 33 10.0
UniRef50_Q7U7L1 Cluster: ABC transporter, ATP binding domain, po... 33 10.0
UniRef50_Q7NR76 Cluster: Probable chromosome segregation protein... 33 10.0
UniRef50_Q7MWH1 Cluster: Iron compound ABC transporter, ATP-bind... 33 10.0
UniRef50_Q74BN3 Cluster: Branched-chain amino acid ABC transport... 33 10.0
UniRef50_Q73RB9 Cluster: Nuclease SbcCD, C subunit, putative; n=... 33 10.0
UniRef50_Q5WFX3 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_O51171 Cluster: Glycine betaine, L-proline ABC transpor... 33 10.0
UniRef50_Q1EYK4 Cluster: ABC transporter related; n=1; Clostridi... 33 10.0
UniRef50_Q1B043 Cluster: DNA replication and repair protein RecF... 33 10.0
UniRef50_Q08X80 Cluster: RecF/RecN/SMC N terminal domain, putati... 33 10.0
UniRef50_A7HK60 Cluster: ABC transporter related; n=2; Thermotog... 33 10.0
UniRef50_A7BC11 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A6QAF8 Cluster: Glycosyl transferase; n=1; Sulfurovum s... 33 10.0
UniRef50_A6BKR5 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A5ZTK9 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A5UGM3 Cluster: Putative uncharacterized protein; n=4; ... 33 10.0
UniRef50_A4VUB9 Cluster: Cobalt ABC transporter ATP-binding prot... 33 10.0
UniRef50_A4M1U2 Cluster: SMC domain protein; n=1; Geobacter bemi... 33 10.0
UniRef50_A3I7M2 Cluster: Putative uncharacterized protein; n=2; ... 33 10.0
UniRef50_A3DEL4 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A1K715 Cluster: Chromosome segregation protein; n=2; Az... 33 10.0
UniRef50_Q9VVK6 Cluster: CG32186-PA; n=1; Drosophila melanogaste... 33 10.0
UniRef50_Q7QUH5 Cluster: GLP_516_20938_24855; n=2; Giardia intes... 33 10.0
UniRef50_Q386D4 Cluster: Subtilisin-like serine peptidase; n=1; ... 33 10.0
UniRef50_A2EMR6 Cluster: Viral A-type inclusion protein, putativ... 33 10.0
UniRef50_A0E2H6 Cluster: Chromosome undetermined scaffold_75, wh... 33 10.0
UniRef50_A0BGZ5 Cluster: Chromosome undetermined scaffold_107, w... 33 10.0
UniRef50_Q9HJY4 Cluster: Putative uncharacterized protein Ta0827... 33 10.0
UniRef50_Q0W175 Cluster: Predicted DNA repair ATPase; n=1; uncul... 33 10.0
UniRef50_A7D645 Cluster: ABC transporter related; n=1; Halorubru... 33 10.0
UniRef50_A3MU98 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_P63401 Cluster: Uncharacterized ABC transporter ATP-bin... 33 10.0
UniRef50_Q9RVE0 Cluster: DNA replication and repair protein recF... 33 10.0
UniRef50_Q96F24 Cluster: Nuclear receptor-binding factor 2; n=26... 33 10.0
>UniRef50_Q9W252 Cluster: DNA repair protein RAD50; n=3;
Sophophora|Rep: DNA repair protein RAD50 - Drosophila
melanogaster (Fruit fly)
Length = 1318
Score = 101 bits (243), Expect = 1e-20
Identities = 45/73 (61%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++SL+I+GIRSFG D Q I F SP+TLILG+NGCGKTT++ECL+YA+TG+ PPG
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 216 S-RNECFVHDAKV 251
S R + FVHD K+
Sbjct: 61 SDRGKSFVHDPKI 73
Score = 81.0 bits (191), Expect = 3e-14
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDSSWPLDE KK+KE+FD IF +Y+ LD++ K+RK+ + LK+ E + H+
Sbjct: 164 CHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYL 223
Query: 688 KPDLDQEKLNV 720
K +++ + LN+
Sbjct: 224 KQEMEVKTLNL 234
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/105 (30%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTK-----DV 427
EVL Q+K+++ + + Q+ + R+MKV+ + K F+T+DS ++ + +G++K +
Sbjct: 78 EVLAQIKMQVRDRRGAQVSICRTMKVSK-KRNKMSFETMDSTINFLTGAGQSKREKQDSL 136
Query: 428 SSRCADLDILMHEELGVSKAILNSVVFATKKIQAGHSMKEKRLRK 562
S R D+D+ + + +GVSKAI+N+V+F ++ + + K+L++
Sbjct: 137 SGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 181
>UniRef50_Q7QAJ3 Cluster: ENSANGP00000020218; n=4; Culicidae|Rep:
ENSANGP00000020218 - Anopheles gambiae str. PEST
Length = 1288
Score = 99.5 bits (237), Expect = 8e-20
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L IRGIRSFG + D Q+I F SPLTLI+GQNGCGKTTIIECL+Y +TG++PPG
Sbjct: 1 MSTINKLEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG 60
Query: 216 -SRNECFVHDAKV 251
+R FVHD K+
Sbjct: 61 TNRGVGFVHDPKI 73
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDS WPL+E K++K++FD IF +Y+ +D+L KI K+Y + LK + ++ L
Sbjct: 161 CHQEDSCWPLEEPKELKKKFDAIFGTTEYNRVIDKLIKISKEYNEKLKEKQGDLKLLQNV 220
Query: 688 KPDLDQEKLNV 720
K + ++L +
Sbjct: 221 KAQAETKQLQL 231
Score = 57.6 bits (133), Expect = 3e-07
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +2
Query: 257 STEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVS-- 430
+ E LGQVKL + + + RSMK+T K KF+T+DS ++ + K K
Sbjct: 76 TVESLGQVKLMVKDFTGNTVTAIRSMKITHKGKNP-KFETMDSTITMENAQTKEKVTMTR 134
Query: 431 SRCADLDILMHEELGVSKAILNSVVFATKKIQAGHSMKEKRLRK 562
SR D++ M + +GVSKAILN+V+F ++ + K L+K
Sbjct: 135 SRVTDINNEMCDAMGVSKAILNNVIFCHQEDSCWPLEEPKELKK 178
>UniRef50_A5D6Y3 Cluster: RAD50 protein; n=9; Eutheria|Rep: RAD50
protein - Homo sapiens (Human)
Length = 110
Score = 96.3 bits (229), Expect = 7e-19
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++ ++I G+RSFG ED D+Q I F SPLT+++G NG GKTTIIECL+Y TG PPG
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 216 SRNECFVHDAKVNDQQKYSVK*N*RLSMQKTN 311
++ FVHD KV Q+ V+ RL + N
Sbjct: 61 TKGNTFVHDPKV--AQETDVRAQIRLQFRDVN 90
>UniRef50_Q92878 Cluster: DNA repair protein RAD50; n=37;
Euteleostomi|Rep: DNA repair protein RAD50 - Homo
sapiens (Human)
Length = 1312
Score = 96.3 bits (229), Expect = 7e-19
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++ ++I G+RSFG ED D+Q I F SPLT+++G NG GKTTIIECL+Y TG PPG
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 216 SRNECFVHDAKVNDQQKYSVK*N*RLSMQKTN 311
++ FVHD KV Q+ V+ RL + N
Sbjct: 61 TKGNTFVHDPKV--AQETDVRAQIRLQFRDVN 90
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDS+WPL EGK +K++FDEIF A +Y L+ L+++R+ Q +K + E+ +L +
Sbjct: 157 CHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQY 216
Query: 688 K 690
K
Sbjct: 217 K 217
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/102 (35%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
T+V Q++L+ + + + V RSM T +KK T+F+TL+ + T + G+ +SS+C
Sbjct: 76 TDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKK-TEFKTLEGVI-TRTKHGEKVSLSSKC 133
Query: 440 ADLDILMHEELGVSKAILNSVVFATKK-----IQAGHSMKEK 550
A++D M LGVSKA+LN+V+F ++ + G ++K+K
Sbjct: 134 AEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQK 175
>UniRef50_Q6C910 Cluster: Similar to sp|P12753 Saccharomyces
cerevisiae YNL250w RAD50 DNA repair protein; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P12753
Saccharomyces cerevisiae YNL250w RAD50 DNA repair
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 1292
Score = 92.7 bits (220), Expect = 9e-18
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L+I+GIRSF ++T+ + I F+ PLTLI+GQNG GKTTIIECLRYA TG +PP
Sbjct: 1 MSSISKLSIQGIRSF--DNTERETITFNKPLTLIVGQNGSGKTTIIECLRYATTGDLPPH 58
Query: 216 SRNECFVHDAKV 251
S+ F+HD K+
Sbjct: 59 SKGGAFIHDPKI 70
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 481 KSHTKFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE 660
KS + CHQE+S WPL E +K+RFDEIF+A K++ LD +K +RK+ +KL
Sbjct: 146 KSILDYVIFCHQEESLWPLSEPAVLKKRFDEIFEALKFTKALDSIKSLRKEKNVEIKLQT 205
Query: 661 QEVAHLTEKKPDLDQ--EKLNVVNSRV 735
Q +L K D+ EK N++ R+
Sbjct: 206 QTTEYLKADKDRADKAAEKANLLLERI 232
Score = 64.1 bits (149), Expect = 4e-09
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK-FQTLDSFLSTVDESGKTKDVSSRC 439
EVLGQVKL N Q+ TR+M+V L KK T+ F+TL+ L +G+ VS+RC
Sbjct: 75 EVLGQVKLAFTNVNGIQMICTRTMQV--LVKKNTRQFKTLEGQLMA-SNNGERTTVSTRC 131
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
A+LD M LGVSK+IL+ V+F
Sbjct: 132 AELDAQMPLYLGVSKSILDYVIF 154
>UniRef50_Q2HCY4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1282
Score = 88.6 bits (210), Expect = 1e-16
Identities = 38/69 (55%), Positives = 54/69 (78%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++ L+I G+RSFGP+ ++ I F++PLTLI+G NG GKTTIIECL+YA TG++PP
Sbjct: 1 MSRIEKLSILGVRSFGPQH--QETIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN 58
Query: 216 SRNECFVHD 242
S+ F+HD
Sbjct: 59 SKGGAFIHD 67
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ++S WP+ E +K+RFDEIF+A KY+ +D LK +RK + L+ L+ L E
Sbjct: 155 CHQDESLWPMSEPAALKKRFDEIFEAMKYTKVIDNLKILRKKKGEELRELK-----LQES 209
Query: 688 KPDLDQEKLNVVN 726
+ ++E+ + VN
Sbjct: 210 QDKANKERADKVN 222
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQ-TLDSFLSTVDESGKTKDVSSRC 439
+V QVK+ + + VTR++++ + KK T+ Q TL+ L + +G+ +S+R
Sbjct: 75 DVRAQVKVSFRSTVGESYVVTRNVQL--MVKKSTRSQKTLEGSL-LLRNNGERHVISTRV 131
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
+LD L+ E+LGVS A+L++V+F
Sbjct: 132 MELDKLVPEKLGVSPAVLDTVIF 154
>UniRef50_Q0U227 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1317
Score = 88.6 bits (210), Expect = 1e-16
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L I+GIRSFGPE + I FD PLTLI+G NG GKTTIIECLRYA TG +PP
Sbjct: 1 MSRIDRLMIQGIRSFGPERGET--IKFDPPLTLIVGWNGSGKTTIIECLRYATTGDLPPH 58
Query: 216 SR-NECFVHDAKVNDQQKYSVK*N*RLSMQKTNSWR 320
S+ F+HD K+ D+++ + +LS + T+ R
Sbjct: 59 SKTGGAFLHDPKLQDEKEIMAQ--VKLSFRSTSGVR 92
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDS+WPL + +K++FDEIF+A KY+ +D +K IRK+ L L+ H E
Sbjct: 156 CHQEDSTWPLSDATTLKKKFDEIFEAMKYTKAIDNIKMIRKNRNIQLGQLKIIEGHAKED 215
Query: 688 K 690
K
Sbjct: 216 K 216
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/82 (34%), Positives = 51/82 (62%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
E++ QVKL + ++ TRSM+VT +++ +TL+ L + + + +S+R A
Sbjct: 76 EIMAQVKLSFRSTSGVRMVATRSMQVTVKKTGRSQ-KTLEGSL-LMKKDTENHSISTRVA 133
Query: 443 DLDILMHEELGVSKAILNSVVF 508
+LD ++ + LGV KAIL++V+F
Sbjct: 134 ELDQIIPQYLGVPKAILDNVIF 155
>UniRef50_A3GHA0 Cluster: DNA repair protein; n=3;
Saccharomycetales|Rep: DNA repair protein - Pichia
stipitis (Yeast)
Length = 1306
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L+I+GIRSF PE+ E+ I F PLTLI GQNGCGKTTIIECL+Y TG +PP
Sbjct: 1 MSSLFKLSIKGIRSFEPEN--EETIQFGFPLTLICGQNGCGKTTIIECLKYVTTGDLPPN 58
Query: 216 SRNECFVHDAKVN 254
S+ FV+D ++
Sbjct: 59 SKGGAFVNDPSIS 71
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ++S WPL E +K+RFD+IF+A K++ LD LK I+KD + ++KL+EQ V HL
Sbjct: 159 CHQDESLWPLSEASVLKKRFDDIFEASKFTKVLDNLKTIKKDMSTDIKLIEQSVKHLNID 218
Query: 688 K 690
K
Sbjct: 219 K 219
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKK---KTKFQTLDSFLSTVDESGKTKDVSSR 436
V GQ+KL NA K + TR++++T + F+TL+ L+T+D+ K +S++
Sbjct: 76 VTGQIKLAFRNANGKSMIATRTVQLTRKQTRGAFTNTFKTLEGQLATIDKGNKVS-ISTK 134
Query: 437 CADLDILMHEELGVSKAILNSVVF 508
++LD LG S AIL+ V+F
Sbjct: 135 NSELDAQTPIFLGASPAILDYVLF 158
>UniRef50_P12753 Cluster: DNA repair protein RAD50; n=10;
Saccharomycetales|Rep: DNA repair protein RAD50 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1312
Score = 87.4 bits (207), Expect = 3e-16
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L+I+GIRSF + D + I F PLTLI+G NG GKTTIIECL+YA TG +PP
Sbjct: 1 MSAIYKLSIQGIRSF--DSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN 58
Query: 216 SRNECFVHDAKVNDQQ 263
S+ F+HD K+ ++
Sbjct: 59 SKGGVFIHDPKITGEK 74
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +1
Query: 481 KSHTKFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE 660
K+ ++ CHQEDS WPL E +K++FDEIF A K++ LD LK I+KD + ++KLL+
Sbjct: 147 KAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLKSIKKDMSVDIKLLK 206
Query: 661 QEVAHLTEKKPDLDQEKLNV 720
Q V HL K KLN+
Sbjct: 207 QSVEHLKLDKDRSKAMKLNI 226
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
++ QVKL +A + VTR++++ + K T F+TL+ L ++ SG +S+R
Sbjct: 75 DIRAQVKLAFTSANGLNMIVTRNIQLL-MKKTTTTFKTLEGQLVAINNSGDRSTLSTRSL 133
Query: 443 DLDILMHEELGVSKAILNSVVF 508
+LD + LGV KAIL V+F
Sbjct: 134 ELDAQVPLYLGVPKAILEYVIF 155
>UniRef50_UPI0000D56574 Cluster: PREDICTED: similar to RAD50
homolog; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RAD50 homolog - Tribolium castaneum
Length = 1309
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/68 (51%), Positives = 53/68 (77%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQE+S+WPLDEGKKVKE+FDEIFDA + + C++ +K+ K+ + +KLL+ E+ + EK
Sbjct: 160 CHQENSAWPLDEGKKVKEKFDEIFDAQQSNKCVEIYRKLLKEKQEKIKLLKLELEYKKEK 219
Query: 688 KPDLDQEK 711
K +D++K
Sbjct: 220 KEQVDKDK 227
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
MA ++ L I G+RSFGP + Q I F +PLTLILGQNG GKTTIIE ++Y T ++P G
Sbjct: 1 MATLERLQISGVRSFGPNEEHCQTIKFATPLTLILGQNGSGKTTIIEAIKYVCTAELPQG 60
Query: 216 SR-NECFVHDAKVN 254
+ + FV+D K++
Sbjct: 61 TNGGQGFVNDPKMS 74
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
T GQ+KL++V++K+ + ++R M++T A +F + + + V +G +S RC
Sbjct: 77 TTTRGQIKLRVVDSKNNAVTISRIMELTQTAINTQRFSSKGATIRIVKPNGDDSSISGRC 136
Query: 440 ADLDILMHEELGVSKAILNSVVFATKK-----IQAGHSMKEK 550
AD+ + + VS +ILN+VVF ++ + G +KEK
Sbjct: 137 ADITNECCQIMNVSSSILNNVVFCHQENSAWPLDEGKKVKEK 178
>UniRef50_Q9C499 Cluster: UVS6; n=7; Fungi|Rep: UVS6 - Neurospora
crassa
Length = 1314
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/69 (53%), Positives = 53/69 (76%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++ ++I G+RSFGP + I F++PLTLI+G NG GKTTIIECL+YA TG++PP
Sbjct: 1 MSKLEKMSILGVRSFGPRHPEA--IAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN 58
Query: 216 SRNECFVHD 242
S++ F+HD
Sbjct: 59 SKSGAFIHD 67
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ++S WP+ G +K+RFDEIF+A KY+ +D +K +RK + L+LL + A E
Sbjct: 155 CHQDESLWPMSPGADLKKRFDEIFEAKKYAKVIDNIKLLRKTKGEELRLLRMQEAQDKEN 214
Query: 688 KPDLDQ 705
K D+
Sbjct: 215 KERADK 220
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
+V Q+KL + + VTR++++ A+ K +K +TL+ L + +G + +S+R
Sbjct: 75 DVQAQIKLSFRSTVGESFVVTRNVQL-AVTKTSSKQKTLEGSL-LLRANGDRQVLSTRVV 132
Query: 443 DLDILMHEELGVSKAILNSVVF 508
DL+ L+ E+LGVS A+L++V+F
Sbjct: 133 DLNKLVPEKLGVSPAVLDAVIF 154
>UniRef50_Q54CS9 Cluster: DNA recombination/repair protein; n=1;
Dictyostelium discoideum AX4|Rep: DNA
recombination/repair protein - Dictyostelium discoideum
AX4
Length = 1351
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++ L ++GIRSF P + I F SPLTLI+GQNG GKTTIIECL+Y TG+MPP
Sbjct: 1 MTSIEKLLVQGIRSFDPREASV--IDFYSPLTLIVGQNGAGKTTIIECLKYTCTGEMPPN 58
Query: 216 -SRNECFVHDAKV 251
S + F+HD K+
Sbjct: 59 CSSGQAFIHDTKI 71
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE 660
CHQEDS+WPL E K+K +FDEIF A KY+ L LK RK+ +K L+
Sbjct: 158 CHQEDSNWPLSESAKLKLKFDEIFSAVKYTKALKSLKDKRKELTTLIKELK 208
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
+EV Q+KL+ N K + +RS+ + + KK +++ +D+ L + G+ S RC
Sbjct: 75 SEVKAQIKLRFKNPIGKPIVASRSLSLIQKSNKKQEYKQIDASLQSYTSDGQKVSKSFRC 134
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
+D+D + + +GV+K IL V+F
Sbjct: 135 SDMDKEIPDLMGVAKPILKHVIF 157
>UniRef50_Q384J8 Cluster: RAD50 DNA repair-like protein; n=4;
Trypanosoma|Rep: RAD50 DNA repair-like protein -
Trypanosoma brucei
Length = 1349
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++ + I G+RSF P + QRI+F PLT+ILG+NG GKTTIIE L A TGQMPPG
Sbjct: 1 MTSIEQIEISGVRSFDPNPNNRQRIVFKKPLTVILGKNGAGKTTIIEALLNACTGQMPPG 60
Query: 216 SRNE--CFVHDAKV 251
E FV+D KV
Sbjct: 61 GGTEKSSFVYDPKV 74
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQED +WPL K+VK+ FD+IF A +Y LDRL++ K+ + K E + L+E
Sbjct: 161 CHQEDGNWPLSPPKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEH 220
Query: 688 KPDLDQ 705
+ Q
Sbjct: 221 REQARQ 226
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDES-GKTKDVSSRC 439
+V Q++L K ++V RS + T + KT F TLD+ ++ D + GK + R
Sbjct: 79 DVKAQIRLLFTGRGGKVMQVIRSFQATR-TRNKTTFATLDNIVAFQDSATGKIISSTYRA 137
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
D+D + + LGVS A+L V+F
Sbjct: 138 NDVDRAIPDMLGVSPAVLEHVIF 160
>UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 -
Cryptosporidium parvum Iowa II
Length = 1062
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/74 (51%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ ++ L I G+RSF P+ + I F+SP+TLI+GQNG GKTTIIECL+ +I+G++PP
Sbjct: 12 MSNLEKLVICGVRSFSPDR--REGIAFESPITLIVGQNGSGKTTIIECLKASISGELPPS 69
Query: 216 SRN-ECFVHDAKVN 254
S++ + F+HD K+N
Sbjct: 70 SKSGQYFIHDPKLN 83
Score = 59.7 bits (138), Expect = 8e-08
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLK 651
CHQEDS+WPL + KVK++FDE+F + +YS L+ + K++ +Y + +K
Sbjct: 181 CHQEDSNWPLQDMAKVKKKFDELFGSTRYSKALELITKLKGEYNKKIK 228
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDE-SGKTKDVSSRC 439
E + K++IV + TR + + K +F+ L+S L T DE SG+ +S +C
Sbjct: 98 EYQNKKKIQIVRSFQLSHIKTRKADLKSTGDLKPQFRVLESVLQTKDEESGQVTSISHKC 157
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
AD++ + GVS +I+ +V+F
Sbjct: 158 ADINAQVPILFGVSNSIIENVLF 180
>UniRef50_Q8SRK6 Cluster: RAD50-LIKE DNA REPAIR PROTEIN; n=1;
Encephalitozoon cuniculi|Rep: RAD50-LIKE DNA REPAIR
PROTEIN - Encephalitozoon cuniculi
Length = 1247
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
MA +K L IRG+RSF ++++ + F SPLTLI+G NG GKTTIIE L+YA TG +PP
Sbjct: 1 MASIKKLMIRGVRSFSHKESNT--LEFYSPLTLIVGANGTGKTTIIESLKYATTGSLPPN 58
Query: 216 SRNECFVHDAKV 251
SR F+HD V
Sbjct: 59 SRGGAFIHDPSV 70
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQE+S+WPL E VK++ D+IF + KY LD LK RK+ + ++K+ QE+ L +
Sbjct: 153 CHQEESTWPLGEPVVVKKKLDDIFASAKYGKALDSLKSSRKECSSDVKMKMQELEFLRKM 212
Query: 688 KPDLDQEKLNV 720
K + +L +
Sbjct: 213 KERKESLELRI 223
Score = 41.5 bits (93), Expect = 0.022
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
EV GQVKL N + + +R++++ A + + + +TL+S + + G+ VS R
Sbjct: 75 EVQGQVKLLFTNVHGETMICSRTIQL-AQRRDRREQKTLESVI-WAERDGE--GVSGRSG 130
Query: 443 DLDILMHEELGVSKAILNSVVF 508
D+D M + GVS +IL S++F
Sbjct: 131 DVDAEMPQHFGVSGSILESIIF 152
>UniRef50_A5DBJ4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1302
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L+I+G+RSF E ++ I F PLTLI GQNGCGKTTIIECL+YA TG +PP
Sbjct: 1 MSNLYKLSIQGVRSFDSESSET--IEFGFPLTLICGQNGCGKTTIIECLKYATTGDLPPN 58
Query: 216 SRNECFVHDAKV 251
S+ FV+D +
Sbjct: 59 SKGGTFVNDPSI 70
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ+DS WPL E +K+RFD+IF+A K++ LD LK I+KD + ++KL++Q V HL
Sbjct: 159 CHQDDSLWPLSEASVLKKRFDDIFEALKFTKVLDSLKTIKKDMSNDIKLIDQNVQHLRVD 218
Query: 688 KPDLDQEKLNVVNSRV 735
K D+ + V ++ V
Sbjct: 219 KSRADKIRSKVQSTSV 234
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKK---KTKFQTLDSFLSTVDESGKTKDVSSR 436
V QVKL N K + TR+M++T K F+TL+ LS +D+ G+ +S++
Sbjct: 76 VNAQVKLAFQNVNGKSMICTRTMQLTKKRGKGVASNTFKTLEGQLSIMDQ-GQKSTISTK 134
Query: 437 CADLDILMHEELGVSKAILNSVVF 508
A+LD + LG S+AIL+ V+F
Sbjct: 135 NAELDSQIPVYLGASRAILDYVIF 158
>UniRef50_Q01GV4 Cluster: DNA repair-recombination protein; n=4;
Viridiplantae|Rep: DNA repair-recombination protein -
Ostreococcus tauri
Length = 1313
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M V L I+GIRSF P++ E I F PLTLI+G+NG GKTT+IECL+ TG++PP
Sbjct: 1 MCTVDKLLIKGIRSFSPDN--EHVIQFPKPLTLIVGRNGAGKTTVIECLKMGSTGELPPS 58
Query: 216 SRN-ECFVHDAKVND 257
+R+ + F+HD KV D
Sbjct: 59 ARSGQAFIHDPKVAD 73
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
TEV Q+KL+ N K V RS ++T A+ K + + LDS + +VD +GK +S +C
Sbjct: 75 TEVKAQIKLRFRNVTGKPFVVIRSFQLTQKARGKLEKKDLDSVIQSVDANGKMVSISKKC 134
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
D++ + +GVSKAIL +VVF
Sbjct: 135 VDINAEVPALMGVSKAILENVVF 157
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/60 (36%), Positives = 40/60 (66%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
HQE+S+WPL + +K++FDEIF A KY+ L+ ++K++ + A ++ + +V L +K
Sbjct: 159 HQEESNWPLGDSAGLKKKFDEIFSATKYTKALEHIRKLKTEQAGLIRDYKGKVESLKIQK 218
>UniRef50_Q6BRD1 Cluster: Similar to CA1045|IPF11620 Candida
albicans IPF11620; n=1; Debaryomyces hansenii|Rep:
Similar to CA1045|IPF11620 Candida albicans IPF11620 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 845
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + L+I+GIRSF E + I F PLTLI GQNGCGKTTIIECL+YA TG +PP
Sbjct: 1 MSSLFKLSIQGIRSFDSER--HETIQFGFPLTLICGQNGCGKTTIIECLKYATTGDLPPN 58
Query: 216 SRNECFVHDAKV 251
S+ FV+D +
Sbjct: 59 SKGGAFVNDPSI 70
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ+DS WPL E +K+RFD+IF+A K++ LD LK I+KD ++KL+EQ V HL
Sbjct: 160 CHQDDSLWPLSEASVLKKRFDDIFEALKFTKVLDNLKTIKKDMTTDIKLIEQSVHHLKID 219
Query: 688 KPDLDQ--EKLNVVNSRV 735
K + EK+N +N +V
Sbjct: 220 KSRAKKINEKVNDLNQKV 237
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK-------FQTLDSFLSTVDESGKT 418
+ V QVKL +NA K + TR+M++T KKKT+ F+TLD L+ +D+ KT
Sbjct: 74 SSVTAQVKLAFLNANGKSMITTRTMQLT---KKKTRSGVSSNTFKTLDGQLAVMDKGTKT 130
Query: 419 KDVSSRCADLDILMHEELGVSKAILNSVVF 508
+S++ A+LD + LG S+AIL+ V+F
Sbjct: 131 T-ISTKNAELDTSIPIYLGASRAILDYVIF 159
>UniRef50_Q1EA29 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 744
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+ L+I G+RSF ++T + I F +PLTLI+G NG GKTTIIECL+YA TG++PP S+
Sbjct: 431 IDKLSILGVRSF--DNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 488
Query: 225 ECFVHDAK 248
F+HD K
Sbjct: 489 GAFIHDPK 496
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNL---KLLEQ 663
CHQ++S WPL E +K++FDEIF+A KY+ +D +K +RK + L K++EQ
Sbjct: 542 CHQDESLWPLSEPSVLKKKFDEIFEAQKYTKAIDNIKALRKKQNEELAKYKIMEQ 596
Score = 39.5 bits (88), Expect = 0.087
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 371 QTLDSFLSTVDESGKTKDVSSRCADLDILMHEELGVSKAILNSVVF 508
+TL+ L E +T +SSR A+LD +M + LGVS+AIL++V+F
Sbjct: 497 KTLEGQLLMTKEGERTS-ISSRVAELDQIMPQYLGVSRAILDNVIF 541
>UniRef50_Q9UTJ8 Cluster: DNA repair protein rad50; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad50
- Schizosaccharomyces pombe (Fission yeast)
Length = 1290
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ + ++I GIRSF ++ + I F SPLTLI+GQNG GKTTIIECL+YA TG +PP
Sbjct: 1 MSCIDRMSIMGIRSF--DNRSRESIQFFSPLTLIVGQNGSGKTTIIECLKYATTGILPPN 58
Query: 216 SRNECFVHDAKV 251
++ F+HD K+
Sbjct: 59 TKGGAFIHDPKI 70
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQE+S WPL E +K+RFDEIF++ +Y+ LD++K +++D +K+ + + H
Sbjct: 155 CHQEESFWPLSEPANLKKRFDEIFESLRYAKALDQIKGLKRDQETQVKVDQATLTHYRSD 214
Query: 688 KPDLDQEKLNVVNS 729
K ++ +L V S
Sbjct: 215 KERAEKIELRVHES 228
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQ-TLDSFLSTVDESGKTKDVSSRC 439
EVL QVKL N ++ TRS++++ KK T+ Q TLD L + ++ +T +S+RC
Sbjct: 75 EVLAQVKLAFRNTNQVKMICTRSLQLSV--KKTTRQQKTLDGQLLILKDNERTT-ISNRC 131
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
A+LD + LGVSKA+L+ V+F
Sbjct: 132 AELDSQVPLSLGVSKALLDYVIF 154
>UniRef50_Q4Q8L7 Cluster: RAD50 DNA repair-like protein; n=3;
Leishmania|Rep: RAD50 DNA repair-like protein -
Leishmania major
Length = 1360
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++ L + G+RSF P T++Q I F PLT+ILG+NG GKTTIIE L A TG MPPG
Sbjct: 1 MTSIEKLQLCGVRSFDPNPTNQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG 60
Query: 216 SRNE--CFVHDAKV 251
S E FV+D KV
Sbjct: 61 SGTERGSFVYDPKV 74
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQE+ +WPL K VK FD+IF A +Y LDRL+ K++ + LK E + L E
Sbjct: 161 CHQEECNWPLGPPKDVKRIFDDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALREH 220
Query: 688 KPDLDQ 705
+ Q
Sbjct: 221 REQAKQ 226
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDES-GKTKDVSSR 436
TEV Q++L K ++V RS + T A + T F TLD+ ++ D S G+ + R
Sbjct: 78 TEVKAQIRLIFTGKGGKLMQVIRSFQATRSAHRVT-FTTLDNTIAFQDLSTGEVISSTYR 136
Query: 437 CADLDILMHEELGVSKAILNSVVF 508
+D+D ++ E LGVS A+L V+F
Sbjct: 137 SSDVDRVVPEMLGVSPAVLEHVIF 160
>UniRef50_Q4PFM8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1309
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
MA + LAIRG+RSF +D I F PLT+I+G NG GKTTIIECL+YA TG +PP
Sbjct: 1 MASLDKLAIRGVRSF--DDKSINIIQFFHPLTVIVGYNGSGKTTIIECLKYATTGDLPPN 58
Query: 216 SRNECFVHDAKV 251
++ FVHD ++
Sbjct: 59 TKGGAFVHDPQM 70
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDS+WPL E +K++FD+IF+A +Y+ LD +K +RKD LK+ + + L
Sbjct: 160 CHQEDSNWPLSEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTVQLKVDKAALEGLKVD 219
Query: 688 KPDLDQEK 711
K D K
Sbjct: 220 KDRADTIK 227
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 STEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDE---SGKTKDV 427
S EV QV+L+ A ++ R+++V+ +TL+ L D+ +GK +
Sbjct: 73 SNEVKAQVRLRFYAANKVRMNCVRNLQVSRKKGGGLTMKTLEGLLQIADDDAKTGKRGTL 132
Query: 428 SSRCADLDILMHEELGVSKAILNSVVF 508
S++C++LD + LGVS++IL +V+F
Sbjct: 133 STKCSELDDEIPRLLGVSRSILENVIF 159
>UniRef50_A4RMW2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1364
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 57 AIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFV 236
A+ RSFGP T+ Q + F++PLTLI+G+NG GKTTIIECL+YA TG+ PP S+ F+
Sbjct: 64 ALAESRSFGP--TNAQFVTFNTPLTLIVGENGSGKTTIIECLKYATTGEQPPNSKGGAFL 121
Query: 237 HDAK 248
HD K
Sbjct: 122 HDPK 125
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE--QEVAHLT 681
CHQ+DS WPL E +K++FDE+F+A KY+ +D LK +RK + + L++ + +E +
Sbjct: 203 CHQDDSLWPLSEPSVLKKKFDELFEAIKYTKAIDNLKLLRKKHGEQLRIFKNLEETSKQD 262
Query: 682 EKKPDLDQEKLNVVNSRV 735
++K + + + V+ + +
Sbjct: 263 KEKGERYGKAIKVLEAEI 280
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 275 QVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDI 454
QVKL + +QL VTRS++VT AKKK +T+D L V+ +G+ +S + A+LD
Sbjct: 127 QVKLSFYSTIGQQLVVTRSLQVTQ-AKKKLNVKTIDGTLR-VETNGEHVSLSKKNAELDE 184
Query: 455 LMHEELGVSKAILNSVVF 508
++ E++GV AIL +V+F
Sbjct: 185 MVPEKMGVPAAILENVIF 202
>UniRef50_A3A742 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 1526
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ V + I+GIRSF PE+ + I F PLTLI+G NG GKTTIIECL+ + TG++PP
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNV--ITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 58
Query: 216 SRN-ECFVHDAKV 251
SR+ FVHD KV
Sbjct: 59 SRSGHTFVHDPKV 71
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
HQ++S+WPL + +K++FD+IF A +Y+ L+ +KK+ KD AQ +K ++ +L K
Sbjct: 187 HQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLK 246
Query: 691 PDLDQEKLNVVNSR 732
+ + N+ +
Sbjct: 247 DQAYRLRDNIAQDQ 260
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 425 VSSRCADLDILMHEELGVSKAILNSVVF 508
+S RCAD+D + +GVSKAIL +V+F
Sbjct: 158 LSYRCADMDREIPALMGVSKAILENVIF 185
>UniRef50_A2X530 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1311
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ V + I+GIRSF PE+ + I F PLTLI+G NG GKTTIIECL+ + TG++PP
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNV--ITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 58
Query: 216 SRN-ECFVHDAKV 251
SR+ FVHD KV
Sbjct: 59 SRSGHTFVHDPKV 71
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
HQ++S+WPL + +K++FD+IF A +Y+ L+ +KK+ KD AQ +K ++ +L K
Sbjct: 187 HQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLK 246
Query: 691 PDLDQEKLNVVNSR 732
+ + N+ +
Sbjct: 247 DQAYRLRDNIAQDQ 260
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 425 VSSRCADLDILMHEELGVSKAILNSVVF 508
+S RCAD+D + +GVSKAIL +V+F
Sbjct: 158 LSYRCADMDREIPALMGVSKAILENVIF 185
>UniRef50_A7APR9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 1121
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/78 (47%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ +KSL I+GIR F P + Q I F+ PLTLI+G NG GKTTI+ECL+ + G +PP
Sbjct: 1 MSTLKSLQIQGIRCFSPNNA--QSIEFEKPLTLIVGPNGAGKTTIMECLKMGLCGILPPN 58
Query: 216 S-RNECFVHDAKVNDQQK 266
+ R + F++D+K+++Q++
Sbjct: 59 ADRGKSFIYDSKMSEQRE 76
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +1
Query: 505 ICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLK----LLEQEVA 672
+CHQ++S+W LD+ K K +FD++ + +Y+ L L+K +K+ + +K LE A
Sbjct: 159 VCHQDESNWALDDLSKFKSKFDDLLETSRYTKALTALQKEKKEQNEAIKREMIKLEYAKA 218
Query: 673 HLTEKKPDLDQEKLNVVN 726
+T+ +Q K N N
Sbjct: 219 QITQVAELKNQFKSNADN 236
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK--FQTLDSFLSTVDESGKTKDVSSR 436
EV Q+ L + + Q+ TR+ VT +K F+T +S + + ++ +
Sbjct: 76 EVRAQITLGVETYQKVQIFATRNYSVTRERNDGSKPTFKTGESKMRVIGPDEVESNLGMK 135
Query: 437 CADLDILMHEELGVSKAILNSVV 505
+D+D + +G+S+A+++SVV
Sbjct: 136 MSDIDTSLPSMMGLSRALIDSVV 158
>UniRef50_Q9SL02 Cluster: DNA repair protein RAD50; n=4;
Magnoliophyta|Rep: DNA repair protein RAD50 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1316
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ V + I+GIRSF PE+ + + F PLTLI+G NG GKTTIIECL+ + TG++PP
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNV--VTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPN 58
Query: 216 SRN-ECFVHDAKV 251
+R+ F+HD KV
Sbjct: 59 ARSGHSFIHDPKV 71
Score = 58.8 bits (136), Expect = 1e-07
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
HQ++S+WPL + +K++FD+IF A +Y+ L+ +KK+ KD AQ +K + ++ +L K
Sbjct: 159 HQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLK 218
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVD-ESGKTKDVSSR 436
TE Q+KL+ A K + RS ++T A K +++ ++S L T++ +G+ +S R
Sbjct: 75 TETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKM-EYKAIESVLQTINPHTGEKVCLSYR 133
Query: 437 CADLDILMHEELGVSKAILNSVVF 508
CAD+D + +GVSKAIL +V+F
Sbjct: 134 CADMDREIPALMGVSKAILENVIF 157
>UniRef50_A1CII9 Cluster: DNA repair protein Rad50; n=9;
Eurotiomycetidae|Rep: DNA repair protein Rad50 -
Aspergillus clavatus
Length = 1382
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3
Query: 69 IRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAK 248
+RSF ++T + I F +PLTLI+G NG GKTTIIECL+YA TG +PP S+ F+HD K
Sbjct: 8 VRSF--DNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPNSKGGAFIHDPK 65
Query: 249 V 251
+
Sbjct: 66 L 66
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQ-TLDSFLSTVDESGKTKDVSSRC 439
EVL QVKL + ++ TRS+++T KK T+ Q TL+ L + + +T +SSR
Sbjct: 71 EVLAQVKLSFKSTSGAKMVATRSLQLTV--KKTTRQQKTLEGQLLMIKDGERTA-ISSRV 127
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
A+LD +M + LGVSKA+L+SV+F
Sbjct: 128 AELDQIMPQYLGVSKAVLDSVIF 150
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ++S WP+ E +K++FDEIF+A KY+ +D +K +RK + L + H E
Sbjct: 151 CHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKED 210
Query: 688 KPDLDQ-EKLNV 720
K D+ EK ++
Sbjct: 211 KEKADRAEKRSI 222
>UniRef50_UPI00015B47B3 Cluster: PREDICTED: similar to LP09268p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LP09268p - Nasonia vitripennis
Length = 1307
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ +K L IRGIR+FG E + I F PLTLILG NG GKTTIIE L++ +G+ PP
Sbjct: 1 MSRIKDLEIRGIRNFGDERA-KVLIHFSKPLTLILGPNGTGKTTIIEALKFVTSGEYPPD 59
Query: 216 S-RNECFVHDAKV 251
S R + FVH+ K+
Sbjct: 60 SDRGKSFVHEPKL 72
Score = 68.5 bits (160), Expect = 2e-10
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE 660
CHQE+S+WPL++GKK+K+RFDEIFD KY+ +D + K+ KD + L+
Sbjct: 160 CHQEESNWPLEDGKKLKDRFDEIFDTSKYNKAMDTITKLIKDLNSEINTLK 210
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/101 (34%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTK-DVSSRCA 442
V GQVK KI++ ++L + R+M+V+ KFQ LD+ ++ +D K K +++RC+
Sbjct: 78 VRGQVKAKILDKSGQELVIIRTMQVSRQKTGALKFQALDNTITRLDARTKDKIQITNRCS 137
Query: 443 DLDILMHEELGVSKAILNSVVFATKKIQAGHSMKEKRLRKD 565
D+D M +GVSK ILN V+F ++ ++ +++ + KD
Sbjct: 138 DIDREMLAAMGVSKPILNYVIFCHQE-ESNWPLEDGKKLKD 177
>UniRef50_A5K1Q6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1785
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++ + I+GIRS+G E+ E + F SP+T+I G NG GK+TIIECL+ + TG PP
Sbjct: 1 MTTLEKIGIQGIRSYGDEEAQE--LEFASPITVIYGNNGSGKSTIIECLKMSCTGDFPPN 58
Query: 216 S-RNECFVHDAKVNDQQKYSVK*N 284
+ + + F+HD ++++ K N
Sbjct: 59 ADKGKSFIHDPLISNKMNIRGKIN 82
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 505 ICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTE 684
+CH E+S WP E K+K++FDE+F D +S LD K RK LK E E+A L E
Sbjct: 162 LCHHEESLWPFSESLKIKKKFDELFGDDHFSKILDEFTKCRKTMNDVLKRKEYELATLRE 221
Score = 39.5 bits (88), Expect = 0.087
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK----FQTLDSFLSTVDESGKTKDV-S 430
+ G++ L + N DK++ ++RS + K K F+ LD+ + E G+ + +
Sbjct: 77 IRGKINLLLKNYNDKRIGISRSFTLFYSKDKNKKIKHTFRALDNSIIIKKEEGQEDVIIT 136
Query: 431 SRCADLDILMHEELGVSKAILNSVV 505
++C D++ + + +GVSKA+L +V+
Sbjct: 137 NKCLDINEHIPKLMGVSKALLENVI 161
>UniRef50_A6RN20 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1310
Score = 71.7 bits (168), Expect = 2e-11
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR-NEC 230
+ I G+RSF + + I F++PLTLI+G NG GKTTIIECL+YA TG PP S+
Sbjct: 1 MRICGVRSF--DHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTGAQPPNSKVGGA 58
Query: 231 FVHDAKVNDQQKYSVK*N*RLSMQKTNSWR 320
F+HD K+ +++ V +LS Q T R
Sbjct: 59 FIHDPKLCGEKE--VLAQVKLSFQSTTGSR 86
Score = 69.3 bits (162), Expect = 9e-11
Identities = 27/78 (34%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLK--LLEQEVAHLT 681
CHQ+DS WP+ E ++K++FD+IF+A KY+ +D LK ++KDYAQ +K + ++ +A
Sbjct: 150 CHQDDSLWPMSEPSQLKKKFDDIFEATKYTKAVDSLKSLKKDYAQQIKGMIADESIAKDN 209
Query: 682 EKKPDLDQEKLNVVNSRV 735
+ K + + + +++++
Sbjct: 210 KDKGEKTKSRCEELSAQI 227
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
EVL QVKL + ++ +TR M++T + K K +TLD+ L V+ G+ VS +
Sbjct: 70 EVLAQVKLSFQSTTGSRMVITRCMQLT-VTKTARKMKTLDAGLM-VNNGGERTAVSHKVG 127
Query: 443 DLDILMHEELGVSKAILNSVVF 508
++D +M LGVS+A+L++V+F
Sbjct: 128 EIDKIMQTALGVSEAVLDNVIF 149
>UniRef50_Q4UDL2 Cluster: DNA repair protein rad50, putative; n=1;
Theileria annulata|Rep: DNA repair protein rad50,
putative - Theileria annulata
Length = 1139
Score = 70.5 bits (165), Expect = 4e-11
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M + S+ IRGIRSF P T+ + F+ PLTLI+G+NG GKTT++E L+ +G +PPG
Sbjct: 1 MTTINSIEIRGIRSFTPYRTEF--LQFEKPLTLIVGKNGSGKTTLVESLKAVTSGTLPPG 58
Query: 216 -SRNECFVHDAKVN--DQQKYSVK 278
S+ FV + K+N + K S+K
Sbjct: 59 QSKGRTFVFNNKLNKSSEVKASIK 82
Score = 48.4 bits (110), Expect = 2e-04
Identities = 13/42 (30%), Positives = 31/42 (73%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKD 633
CHQ++++WPL++ K+K RFD++ + +Y+ L +++ +++
Sbjct: 160 CHQDENNWPLEDPSKIKSRFDDLLETSRYTKALQSIQRAKRE 201
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 STEVLGQVKLKIVNAKDKQLEVTRSMKVTA--LAKKKTKFQTLDSFLSTVDESGKTKDVS 430
S+EV +K+ ++ + +RS VT KK F+ ++ L+ + GK K ++
Sbjct: 74 SSEVKASIKITFNTHTNETVSASRSYTVTTDKTDPKKLTFKGTENVLNVTSQDGKKKSLA 133
Query: 431 SRCADLDILMHEELGVSKAILNSVVF 508
+ D+DI + +G+SKA+L++V+F
Sbjct: 134 LKTTDMDIAVPLLMGMSKALLDNVIF 159
>UniRef50_O44199 Cluster: DNA repair protein rad-50; n=3;
Caenorhabditis|Rep: DNA repair protein rad-50 -
Caenorhabditis elegans
Length = 1298
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/72 (52%), Positives = 43/72 (59%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
MA L IRGIRS G ED D +I F SP TLI G NG GKTT IE L + TGQMP
Sbjct: 1 MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMPT- 59
Query: 216 SRNECFVHDAKV 251
+ + F+H V
Sbjct: 60 QKKQNFIHSTDV 71
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +1
Query: 493 KFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLE 660
K+ CHQEDS+WPL E K++K+RFD+IF K+ +R+KKI D+ + ++ E
Sbjct: 151 KYVIFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKAQERMKKIVLDFKKEMQTHE 206
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
T V V L+ ++ K ++ R + VT+ K + + L+ G +SS+
Sbjct: 75 TRVDASVTLEFIDVKGRECTAVRRLVVTSGTKAAALAE--EHTLAIKYPDGTVNTLSSKV 132
Query: 440 ADLDILMHEELGVSKAILNSVVFATKKIQAGHSMKEKRLRK 562
D + + + LGV +A+ V+F ++ + K L+K
Sbjct: 133 CDFNTALLKHLGVPRAVFKYVIFCHQEDSTWPLSEPKELKK 173
>UniRef50_A7F2U1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1336
Score = 69.3 bits (162), Expect = 9e-11
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLK--LLEQEVAHLT 681
CHQ+DS WP+ E +K++FD+IF+A KY+ +D LK ++KDYAQ +K + E+ +A
Sbjct: 176 CHQDDSLWPMSEPSHLKKKFDDIFEATKYTKAVDSLKSLKKDYAQQIKGMIAEEAIAKDN 235
Query: 682 EKKPDLDQEKLNVVNSRV 735
+ K + + + + S++
Sbjct: 236 KDKGEKTKSRCEELASQI 253
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 69 IRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR-NECFVHDA 245
+RSF + + I F++PLTLI+G NG GKTTIIECL+YA TG PP S+ F+HD
Sbjct: 32 VRSF--DHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTGAQPPNSKVGGAFIHDP 89
Query: 246 KVNDQQKYSVK*N*RLSMQKTNSWR 320
K+ +++ V +LS Q T R
Sbjct: 90 KLCGEKE--VLAQVKLSFQSTTGSR 112
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
EVL QVKL + ++ +TRSM++T + K K +TLD+ L V+ G+ VS +
Sbjct: 96 EVLAQVKLSFQSTTGSRMVITRSMQLT-VTKTARKMKTLDAGLM-VNNGGERTAVSHKVG 153
Query: 443 DLDILMHEELGVSKAILNSVVF 508
++D +M LGVS+A+L++V+F
Sbjct: 154 EIDKIMQSALGVSEAVLDNVIF 175
>UniRef50_Q4N5Y3 Cluster: RAD50 DNA repair protein, putative; n=1;
Theileria parva|Rep: RAD50 DNA repair protein, putative
- Theileria parva
Length = 1002
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M + SL IRGIRSF P T+ + F+ PLTLI+G+NG GKTT++E L+ +G +PPG
Sbjct: 1 MTTINSLEIRGIRSFTPYRTEF--LEFEKPLTLIVGKNGSGKTTLVESLKAVTSGILPPG 58
Query: 216 -SRNECFVHDAKVN--DQQKYSVK 278
S+ F+ + K+N + K S+K
Sbjct: 59 QSKGRTFLFNNKLNKSSEVKASIK 82
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/61 (31%), Positives = 40/61 (65%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQ++++WPLD+ K+K RFD++ + +Y+ L +++ ++L L+ + + L++K
Sbjct: 160 CHQDENNWPLDDPSKIKSRFDDLLETSRYTKALQSIQRANLT-QKHLSLMNERM--LSKK 216
Query: 688 K 690
K
Sbjct: 217 K 217
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/86 (27%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 STEVLGQVKLKIVNAKDKQLEVTRSMKVTA--LAKKKTKFQTLDSFLSTVDESGKTKDVS 430
S+EV +K+ ++ + +RS VT + KK F+ ++ L+ + + GK K ++
Sbjct: 74 SSEVKASIKITFNTHTNETVSASRSYSVTTDKVDPKKLTFKGTENVLNVIAQDGKKKSLA 133
Query: 431 SRCADLDILMHEELGVSKAILNSVVF 508
+ D+D+ + +G+SKA+L++V+F
Sbjct: 134 LKTTDMDMAVPLLMGMSKALLDNVIF 159
>UniRef50_Q7RRU1 Cluster: Unnamed protein product; n=7; Plasmodium
(Vinckeia)|Rep: Unnamed protein product - Plasmodium
yoelii yoelii
Length = 1919
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 30 YNMAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
Y M + + I+GIRS+ D Q++ F SP+T+I G NG GK+TIIECL+ TG P
Sbjct: 28 YKMTTLDKIGIQGIRSYC--DEYPQQLEFSSPITIIYGNNGSGKSTIIECLKVNCTGDFP 85
Query: 210 PGS-RNECFVHDAKVNDQ 260
P + + + F+HD ++++
Sbjct: 86 PNAEKGKSFIHDPLISNK 103
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Frame = +1
Query: 505 ICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLT- 681
+CH ++S WP E K+K++FDE+F D +S L+ L K +K + LK E+ ++
Sbjct: 190 LCHHDESLWPFSESTKIKKKFDELFGDDNFSKILEELVKCKKKMNEILKKKNYELINIKD 249
Query: 682 --EKKP----DLDQEKLNVVNSRVF 738
EKK ++++ + + N ++F
Sbjct: 250 SYEKKKNIFLEIEKNQAEIENEKIF 274
Score = 40.3 bits (90), Expect = 0.050
Identities = 21/84 (25%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK----FQTLDSFLSTVDESGKTKDVSS 433
V G++ L + N +K++ ++RS + K+ + F++LD+ + + G +++
Sbjct: 106 VRGKIDLLLKNYNNKKIGISRSFSLYYSKDKQNRIKHTFRSLDNNIIIKKDKGDDIIITN 165
Query: 434 RCADLDILMHEELGVSKAILNSVV 505
+C D++ + + +GVSKA+L +V+
Sbjct: 166 KCVDINCHIPKLMGVSKALLENVI 189
>UniRef50_Q6LFK8 Cluster: DNA repair protein RAD50, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair protein RAD50,
putative - Plasmodium falciparum (isolate 3D7)
Length = 2236
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/76 (39%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++ + I+GIRS+ ED + + F +P+T+I G NG GK+TIIECL+ + TG PP
Sbjct: 1 MTTLEKIGIQGIRSYNDEDVEI--LEFATPITIIYGNNGSGKSTIIECLKVSCTGDFPPN 58
Query: 216 S-RNECFVHDAKVNDQ 260
+ + + F+HD ++++
Sbjct: 59 AEKGKSFLHDPLISNK 74
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTE 684
CH +++ WP E K+K++FDE+F D +S L+ L K +K LK E ++ H+ E
Sbjct: 162 CHHDENLWPFSESIKIKKKFDELFGDDHFSKILEELLKCKKYLNDLLKRKEFDLIHIKE 220
Score = 41.1 bits (92), Expect = 0.029
Identities = 22/85 (25%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 VLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTK----FQTLDSFLSTVDESGKTKDVSS 433
+ G++ + + N +K++ ++RS + K K F+ LD+ + E G +++
Sbjct: 77 IRGKIDVLLNNYNNKRIGISRSYNLFYSKDKNKKVKHTFRALDNNIIIKKEKGDDLIITN 136
Query: 434 RCADLDILMHEELGVSKAILNSVVF 508
+C D++ + + +GVSKA+L +V+F
Sbjct: 137 KCVDINNHIPKLMGVSKALLENVIF 161
>UniRef50_UPI0000499464 Cluster: DNA repair protein Rad50; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
Rad50 - Entamoeba histolytica HM-1:IMSS
Length = 1241
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M L I GIRS P+ E I F PLTLI G NG GKTTIIE +RYA TG PP
Sbjct: 1 MTTFDKLEIAGIRSINPDKPVE--IEFFKPLTLITGPNGAGKTTIIESVRYACTGTSPPN 58
Query: 216 SR-NECFVHDAKVNDQQKYSVK*N*RLSMQK 305
S + FV D ++ +K N L K
Sbjct: 59 SNGGKLFVRDPTMSATKKTDAYINLSLDTSK 89
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQEDS WP +E KK+KE+FD++F Y+ LD + K++K + K E ++E
Sbjct: 147 CHQEDSFWPFEEPKKLKEKFDDVFGTSNYTKFLDDVSKLQKSCKERSKETELRFVKVSED 206
Query: 688 KPDLDQEKLNVVNSR 732
L +++ + S+
Sbjct: 207 YNKLKRDQNEIQKSQ 221
>UniRef50_Q5K749 Cluster: Telomere maintenance protein, putative;
n=2; Filobasidiella neoformans|Rep: Telomere maintenance
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1289
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/74 (36%), Positives = 47/74 (63%)
Frame = +1
Query: 508 CHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEK 687
CHQE+S+WPL E +K++FD+IF+A KY+ LD +K +RK+ LK+ ++ + L
Sbjct: 120 CHQEESNWPLSEPAALKKKFDDIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKAD 179
Query: 688 KPDLDQEKLNVVNS 729
K ++ + ++ S
Sbjct: 180 KDKAERLRKDLEES 193
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVD---ESGKTKDVSS 433
EV QV+L+ NAK +++ TR+++VT + +TL+ L+ D SGK +S+
Sbjct: 35 EVKAQVRLRFWNAKRERMTATRNLQVTTKKTGQLTMKTLEGILAKTDVGDSSGKRNTIST 94
Query: 434 RCADLDILMHEELGVSKAILNSVVF 508
+C+++D + LGVS+AIL +V+F
Sbjct: 95 KCSEMDEEVPYLLGVSRAILENVIF 119
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 165 TIIECLRYAITGQMPPGSRNECFVHDAKVNDQQK 266
TIIECL+YA TG MPP ++ FVHD K+ +++
Sbjct: 2 TIIECLKYATTGDMPPNTKGGAFVHDPKMAGEKE 35
>UniRef50_A2FAD3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1292
Score = 62.9 bits (146), Expect = 8e-09
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDE--QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
M+ + SL I+GIR F PE +E Q I FD+ + LI G NG GKTTI E L+YA+TG
Sbjct: 1 MSKLISLTIKGIRLFNPEPKEEYKQTINFDNNIILITGPNGSGKTTIFESLQYALTGLCR 60
Query: 210 PGSRNECFVHDAKVNDQQKY 269
S F +D V ++ Y
Sbjct: 61 KKSAGIGFFYDINVLGKKDY 80
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 CHQEDSSWPLD-EGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQE 666
C Q D WP++ K +K RFD IF +D Y + ++K+++K+ + L L++E
Sbjct: 156 CQQTDQCWPIELNDKDLKLRFDTIFGSDNYESAIGQIKELKKNKDKELVQLQKE 209
Score = 33.9 bits (74), Expect = 4.3
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
+ + + +LK K E+ R K++ + KK+K +T +S + +DE K+V S+
Sbjct: 79 DYMAECRLKFQAVDGKIYEIVRKTKISK-SGKKSKLKTQESKI--LDEH--QKEVYSKPD 133
Query: 443 DLDILMHEELGVSKAILNSVVFATKKIQ 526
++ + LG+ KAIL +V+F + Q
Sbjct: 134 TVEQQIPRLLGIPKAILENVIFCQQTDQ 161
>UniRef50_A2FAC7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 755
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDE--QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
M+ + SL ++GIR F P+ DE Q I D +TLI G NG GKTTI E ++YA+ G
Sbjct: 1 MSKLLSLTVKGIRLFNPDPKDESTQTIDLDDKMTLITGPNGSGKTTIFEAIQYALIGVSQ 60
Query: 210 PGSRNECFVHDAKVNDQQKYSVK 278
S +D KV +++Y+ +
Sbjct: 61 ENSGGIGLFYDRKVLGKEQYTAE 83
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 481 KSHTKFCRICHQEDSSWPLD-EGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLL 657
KS K C Q + +WP++ G K+KERFD+IF + Y+ D + K K LK
Sbjct: 142 KSIIKNVIFCKQFEQTWPIEMAGSKLKERFDKIFGIEAYNKAHDEIYKALKSKISELK-E 200
Query: 658 EQEVAHLTEKKPD 696
E V L +K D
Sbjct: 201 ENNVYPLIKKSFD 213
>UniRef50_UPI00005866FD Cluster: PREDICTED: similar to RAD50
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to RAD50 protein - Strongylocentrotus
purpuratus
Length = 135
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRC 439
TEV QVKL + K + VTRSM T +K+ +F++L+ + VD GK + +C
Sbjct: 48 TEVKAQVKLCFKDKAGKDVVVTRSMVATK-KEKRIEFKSLEGTIERVDNFGKKPGL--KC 104
Query: 440 ADLDILMHEELGVSKAILNSVVF 508
A++D M E LGVSK +L++V+F
Sbjct: 105 AEIDRAMVESLGVSKQVLSNVIF 127
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIE 176
MA V+ L+I+GIR FG +D D Q I F PLT+I+GQNG GKT E
Sbjct: 1 MASVEELSIQGIRGFGQDDGDRQVIQFFHPLTIIMGQNGAGKTVAHE 47
>UniRef50_A0CV46 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1237
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS-RNECFVHDAKVNDQQK 266
Q I F PLTLI G NG GKTTIIE LR TG PP S + F+ D+ + Q K
Sbjct: 33 QSIYFKQPLTLIWGHNGSGKTTIIEALRTITTGMQPPNSEKGRSFLTDSHLLGQSK 88
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +1
Query: 505 ICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTE 684
+CHQE+ W + +K FDE+F+ + RL++ K+ K+L ++V
Sbjct: 170 LCHQEEQLWMFSDNSTLKGIFDELFETTDLVNIEVRLREQLKEAESKAKVLMEKVEFSKR 229
Query: 685 KKPDLDQEKLNVVN 726
D +++ N+ N
Sbjct: 230 DMDDGQRQRTNLQN 243
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 278 VKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVD-ESGKTKDVSSRCADLDI 454
++L + ++++ R + + KF +L S L T E+ K + + S CA+++
Sbjct: 93 IELSFKSINNREIVARRHFSIVYDSPNSCKFSSLRSTLQTRSLETDKLETLHSTCANIEK 152
Query: 455 LMHEELGVSKAILNSVVFATKKIQ 526
+ LGVS ILN+V+ ++ Q
Sbjct: 153 QIPCFLGVSVPILNNVLLCHQEEQ 176
>UniRef50_A7RWC6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 134
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +2
Query: 263 EVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCA 442
EV GQ+KLK + + VTR++ V KK + +T+D + + G+ + +SS+CA
Sbjct: 47 EVKGQIKLKFKDVTGNYVVVTRTL-VAQQKGKKLETRTMDGVIMR-EVHGQRQSISSKCA 104
Query: 443 DLDILMHEELGVSKAILNSVVF 508
+++ M LGVSKA+L +V+F
Sbjct: 105 EINREMISFLGVSKAVLETVIF 126
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKT 164
M+ ++ + + GIRS+ ++ I F PLTLI+G NG GKT
Sbjct: 1 MSSIEKMQVCGIRSYSHQERCV--IEFQKPLTLIVGHNGAGKT 41
>UniRef50_UPI0000E47056 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1480
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +1
Query: 514 QEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHL---TE 684
+ED++WPL +GK +K +FDEIF A +Y L+ ++K+R + + ++ E HL E
Sbjct: 313 KEDANWPLSDGKTLKGKFDEIFAATRYIKALETIRKLRTEQSGQIREYILETRHLKDWRE 372
Query: 685 KKPDLDQE 708
K L +E
Sbjct: 373 KAKQLSRE 380
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +3
Query: 63 RGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIE 176
R ++SFG +D D Q I F PLTLI+GQNG GKT E
Sbjct: 246 RAVKSFGQDDGDRQVIQFFHPLTLIVGQNGAGKTVAHE 283
>UniRef50_Q2S457 Cluster: Chromosome segregation protein SMC; n=1;
Salinibacter ruber DSM 13855|Rep: Chromosome segregation
protein SMC - Salinibacter ruber (strain DSM 13855)
Length = 1186
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+ L ++G +SF DE + FD +T I+G NGCGK+ I++ +R+ I Q P R+
Sbjct: 3 LSKLELQGFKSFA----DETTLTFDPGVTTIVGPNGCGKSNIVDAIRWVIGEQRPTVLRS 58
Query: 225 E 227
E
Sbjct: 59 E 59
>UniRef50_A1S5R5 Cluster: SMC family protein; n=7; Shewanella|Rep:
SMC family protein - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 1139
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF D RI F +PLT I+G NGCGK+ +I+ +R+ +
Sbjct: 3 LKQIKLAGFKSF----VDPTRIPFPNPLTAIIGPNGCGKSNVIDAVRWVL 48
>UniRef50_A1ZE63 Cluster: Chromosome segregation protein SMC; n=1;
Microscilla marina ATCC 23134|Rep: Chromosome
segregation protein SMC - Microscilla marina ATCC 23134
Length = 1200
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K L I+G +SFG D+ I F + +T I+G NGCGK+ +++ +R+ + Q R+
Sbjct: 3 LKKLEIKGFKSFG----DKVHIDFTTGVTGIVGPNGCGKSNVVDAIRWVLGEQRTKNLRS 58
Query: 225 E 227
+
Sbjct: 59 D 59
>UniRef50_Q84F12 Cluster: SMC protein; n=4; Flexibacteraceae|Rep:
SMC protein - Cytophaga hutchinsonii
Length = 1178
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+ L I+G +SFG D+ I FD +T I+G NGCGK+ +++ +R+ + Q R+
Sbjct: 3 LSKLEIKGFKSFG----DKVVINFDEGITGIVGPNGCGKSNVVDAIRWVLGEQKTRALRS 58
Query: 225 E 227
+
Sbjct: 59 D 59
>UniRef50_A0A3H2 Cluster: Putative cobalt transporter; n=3;
Lactobacillales|Rep: Putative cobalt transporter -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 271
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRI---LFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+ I G+R PE + + I FDSPLT I+GQNG GK+T+++ L IT Q
Sbjct: 4 IEISGLRYTYPEHSFQVEIDRQSFDSPLTAIVGQNGAGKSTLLKLLIGLITPQ 56
>UniRef50_Q2ACW4 Cluster: GTP-binding:Chromosome segregation protein
SMC; n=1; Halothermothrix orenii H 168|Rep:
GTP-binding:Chromosome segregation protein SMC -
Halothermothrix orenii H 168
Length = 1185
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L ++G +SF T I F+SP+T I+G NG GK+ I++ +R+ + Q
Sbjct: 3 LKKLELKGFKSFAKPIT----INFESPITAIVGPNGSGKSNIVDAIRWVLGEQ 51
>UniRef50_Q3ATI3 Cluster: Chromosome segregation protein SMC; n=1;
Chlorobium chlorochromatii CaD3|Rep: Chromosome
segregation protein SMC - Chlorobium chlorochromatii
(strain CaD3)
Length = 1190
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+ + G +SF + RI FD LT I+G NGCGKT +++ +R+ + Q
Sbjct: 6 IELLGFKSFA----QKVRIRFDKGLTAIVGPNGCGKTNVVDAMRWVLGEQ 51
>UniRef50_Q41DQ3 Cluster: Exonuclease, SbcC family; n=1;
Exiguobacterium sibiricum 255-15|Rep: Exonuclease, SbcC
family - Exiguobacterium sibiricum 255-15
Length = 1002
Score = 41.1 bits (92), Expect = 0.029
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECF 233
L +R F E T + R L + +I G G GKTTI + L +A+ G+ G R
Sbjct: 6 LTLRAFGPFADEQTIDFRALGGRTMFVISGNTGAGKTTIFDALTFALYGETSGGEREMSD 65
Query: 234 VHDAKVNDQQKYSVK 278
+ +QK V+
Sbjct: 66 LRSHFAKPEQKTEVE 80
>UniRef50_Q1JZN4 Cluster: Chromosome segregation protein SMC; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Chromosome
segregation protein SMC - Desulfuromonas acetoxidans DSM
684
Length = 1170
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K + I G +SF D + F+ +T ILG NGCGK+ +I+ +R+A+ Q R
Sbjct: 3 IKRIEIIGFKSF----VDRTVLNFEPGVTAILGPNGCGKSNVIDAIRWAMGEQNAKNLRG 58
Query: 225 E 227
+
Sbjct: 59 Q 59
>UniRef50_A6GK48 Cluster: Chromosome segregation protein SMC; n=1;
Plesiocystis pacifica SIR-1|Rep: Chromosome segregation
protein SMC - Plesiocystis pacifica SIR-1
Length = 651
Score = 41.1 bits (92), Expect = 0.029
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K + + G +SF D + ++ D +T ++G NGCGK+ I++ +R+ + Q
Sbjct: 3 IKKIEVIGFKSFA----DREVVVLDDHVTAVIGPNGCGKSNIVDAIRWCLGEQ 51
>UniRef50_A4XJX6 Cluster: Chromosome segregation protein SMC; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Chromosome segregation protein SMC -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 1177
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L I G +SF ++ RI F +T I+G NGCGK+ I + +R+A+ Q
Sbjct: 3 IKWLEIYGFKSF----CEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQ 51
>UniRef50_Q8KBS6 Cluster: SMC family protein; n=9;
Chlorobiaceae|Rep: SMC family protein - Chlorobium
tepidum
Length = 1183
Score = 40.7 bits (91), Expect = 0.038
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 105 RILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
RI FD LT I+G NGCGKT +++ +R+ + Q
Sbjct: 19 RIHFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQ 51
>UniRef50_Q88WJ9 Cluster: Cell division protein Smc; n=1;
Lactobacillus plantarum|Rep: Cell division protein Smc -
Lactobacillus plantarum
Length = 1185
Score = 40.7 bits (91), Expect = 0.038
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+KSL I G +SF D+ +I F + +T I+G NG GK+ IIE +R+ + Q
Sbjct: 3 LKSLEISGFKSFA----DKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQ 51
>UniRef50_Q5YQP2 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 850
Score = 40.7 bits (91), Expect = 0.038
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
++++ +RG R G E E + LTL++G+NGCGK++ E A+TG
Sbjct: 90 LRAIRVRGFRGIGAET--ELALRPGPGLTLVVGRNGCGKSSFAEAAELALTG 139
>UniRef50_Q7BB52 Cluster: SMC protein; n=6; Lactococcus lactis|Rep:
SMC protein - Lactococcus lactis
Length = 1174
Score = 40.7 bits (91), Expect = 0.038
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K + I G +SF D+ ++ FD +T ++G NG GK+ I+E LR+ + Q
Sbjct: 3 LKKMEIVGFKSFA----DKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQ 51
>UniRef50_Q6M230 Cluster: ABC-type transport system, ATPase
component; n=4; Corynebacterium|Rep: ABC-type transport
system, ATPase component - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 240
Score = 40.7 bits (91), Expect = 0.038
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNDQQKYSVK 278
EQ + F +P+T+I G+NG GK+T++E L + GSR+ F + + S+K
Sbjct: 30 EQPLEFRAPITVITGENGVGKSTLVEALAVGMRLNPSGGSRHANFGREGDIVSSLHQSLK 89
>UniRef50_Q0C0X5 Cluster: Chromosome segregation protein SMC; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Chromosome
segregation protein SMC - Hyphomonas neptunium (strain
ATCC 15444)
Length = 1153
Score = 40.3 bits (90), Expect = 0.050
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ L I G +SF D Q + + LT I+G NGCGK+ ++E LR+A+
Sbjct: 3 ITELRIAGFKSF----VDPQTVPIEPGLTGIVGPNGCGKSNLLEALRWAM 48
>UniRef50_O83382 Cluster: Chromosome segregation protein, putative;
n=1; Treponema pallidum|Rep: Chromosome segregation
protein, putative - Treponema pallidum
Length = 941
Score = 39.9 bits (89), Expect = 0.066
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
M +K+L + G +SF D R+ F +T +LG NGCGK+ +++ +++ + Q
Sbjct: 1 MLFLKTLEVFGFKSFA----DRVRVEFADGVTALLGPNGCGKSNVVDAIKWVLGEQ 52
>UniRef50_Q11AI5 Cluster: SMC protein-like; n=1; Mesorhizobium sp.
BNC1|Rep: SMC protein-like - Mesorhizobium sp. (strain
BNC1)
Length = 671
Score = 39.9 bits (89), Expect = 0.066
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
QR+ +P+ LI G+NG GKTT++E +R A+ G+ G+R
Sbjct: 26 QRLGGPTPIILIGGKNGAGKTTLLEAVRLALYGRRALGAR 65
>UniRef50_A7CUX0 Cluster: SMC domain protein; n=1; Opitutaceae
bacterium TAV2|Rep: SMC domain protein - Opitutaceae
bacterium TAV2
Length = 545
Score = 39.9 bits (89), Expect = 0.066
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K+L + G +SF D+ + F+ +T I+G NGCGK+ + + +R+ + Q
Sbjct: 3 LKALKLHGFKSFA----DQSTLRFEPGVTAIVGPNGCGKSNVADAIRWVLGEQ 51
>UniRef50_Q6WD96 Cluster: Rad50; n=2; Giardia intestinalis|Rep:
Rad50 - Giardia lamblia (Giardia intestinalis)
Length = 1387
Score = 39.9 bits (89), Expect = 0.066
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
L ++ IRS+ + + I+F LT+I G NG GK+T++E L Y ++ + P R E
Sbjct: 7 LTLKNIRSYRDQLST---IVFSPNLTIITGHNGAGKSTLLEALLYLLSQERPVYDRIE 61
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 493 KFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLK-LLEQEV 669
++C IC + S W + +++ + D+I + LDR K+ K++ K L EV
Sbjct: 175 QYCLICSETKSHWMFETPEEISKSTDQILN-------LDRFTKLSKEFHPPPKELASSEV 227
Query: 670 AHLTEKKPDLDQE 708
+ T K DQE
Sbjct: 228 CYTTALKAVADQE 240
>UniRef50_Q5WHZ4 Cluster: ABC transporter ATP-binding protein; n=1;
Bacillus clausii KSM-K16|Rep: ABC transporter
ATP-binding protein - Bacillus clausii (strain KSM-K16)
Length = 247
Score = 39.5 bits (88), Expect = 0.087
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 114 FDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNDQQKY 269
F P+T+ +G+NG GK+T+IE L + + GS+N F +A + +Y
Sbjct: 39 FKKPVTIFVGENGTGKSTLIETLAALMELNLEGGSKNHRFETEASHSSLYQY 90
>UniRef50_Q9HLR8 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Thermoplasma acidophilum|Rep: DNA
double-strand break repair rad50 ATPase - Thermoplasma
acidophilum
Length = 896
Score = 39.5 bits (88), Expect = 0.087
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
++ I FD+ + +I+G NG GK++II+ +R+A+ G
Sbjct: 15 EDSEIFFDTGVNIIVGHNGAGKSSIIDAIRFALFG 49
>UniRef50_Q5FPF7 Cluster: Chromosome partition protein Smc; n=3;
Bacteria|Rep: Chromosome partition protein Smc -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 1511
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ L+I G +SF DE R+ LT I+G NGCGK+ ++E LR+A+
Sbjct: 8 IDRLSIGGFKSFA----DEVRLDILPGLTGIIGPNGCGKSNVVEGLRWAM 53
>UniRef50_Q4FPF1 Cluster: Chromosome segregation protein SMC family;
n=2; Candidatus Pelagibacter ubique|Rep: Chromosome
segregation protein SMC family - Pelagibacter ubique
Length = 857
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +3
Query: 48 KSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
K + + G +SF ++ L + LT I+G NGCGK+ I+E LR+ + G+ S
Sbjct: 4 KKIQLNGFKSFA----EKTNFLIEHGLTGIVGPNGCGKSNIVESLRW-VMGETSAKSMRG 58
Query: 228 CFVHDAKVNDQQKYSVK 278
+ D N S K
Sbjct: 59 SGMEDVIFNGTSNKSSK 75
>UniRef50_Q3A212 Cluster: Chromosome segregation SMC protein; n=2;
Bacteria|Rep: Chromosome segregation SMC protein -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 1173
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+K + I G +SF D + F + ++G NGCGK+ +++ +R+A+ Q P R
Sbjct: 3 IKRIEIVGFKSF----VDRVALDFGPGIAAVVGPNGCGKSNVVDAIRWAMGEQSPKNLR 57
>UniRef50_Q0EWN2 Cluster: Chromosome segregation SMC protein,
putative; n=1; Mariprofundus ferrooxydans PV-1|Rep:
Chromosome segregation SMC protein, putative -
Mariprofundus ferrooxydans PV-1
Length = 1159
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF D RI +T I+G NGCGK+ II+ LR+ +
Sbjct: 3 LKRIELAGFKSF----VDPTRIELGEGITAIVGPNGCGKSNIIDALRWVL 48
>UniRef50_A0NL27 Cluster: Chromosome segregation SMC protein; n=2;
Oenococcus oeni|Rep: Chromosome segregation SMC protein
- Oenococcus oeni ATCC BAA-1163
Length = 1184
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+KSL I G +SF D+ I F +T I+G NG GK+ IIE +R+ + Q G R
Sbjct: 3 LKSLEINGFKSFA----DKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLR 57
>UniRef50_Q6L2H8 Cluster: DNA repair protein Rad50; n=1; Picrophilus
torridus|Rep: DNA repair protein Rad50 - Picrophilus
torridus
Length = 880
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+KSL ++ S+ D+ I F +T+I G+NG GKT+I++ +++A+ + +
Sbjct: 3 IKSLKLKNFVSY-----DDAEIEFTPGITIITGKNGAGKTSIVDAIKFALFTETRNSEKI 57
Query: 225 ECFVHDAKVN 254
E V K N
Sbjct: 58 EEMVKKGKNN 67
>UniRef50_A7I567 Cluster: SMC protein-like protein; n=1; Candidatus
Methanoregula boonei 6A8|Rep: SMC protein-like protein -
Methanoregula boonei (strain 6A8)
Length = 673
Score = 39.1 bits (87), Expect = 0.12
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 51 SLAIRGIRSF-GPEDTDEQRILFDS---PLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
SL + IR F G D IL P+ LI G+NG GKTT+ E + + GQ PGS
Sbjct: 5 SLTLENIRIFKGKNRLDFTPILTSDVKKPIILIGGKNGAGKTTLFESILLCLYGQHAPGS 64
>UniRef50_Q9CFZ0 Cluster: Nuclease sbcCD subunit C; n=3; Lactococcus
lactis|Rep: Nuclease sbcCD subunit C - Lactococcus
lactis subsp. lactis (Streptococcus lactis)
Length = 1046
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 78 FGPEDTD--EQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
FGP + + R+L +SP+ LI G G GK+TI + + YA+ G
Sbjct: 11 FGPHENSVVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFG 53
>UniRef50_Q73ML2 Cluster: Chromosome partition protein SmC,
putative; n=1; Treponema denticola|Rep: Chromosome
partition protein SmC, putative - Treponema denticola
Length = 980
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K+L I G +SF D +I F +T +LG NGCGK+ +++ +++ + Q
Sbjct: 3 LKNLEIFGFKSF----PDRVKIEFADGITALLGPNGCGKSNVVDAVKWVLGEQ 51
>UniRef50_Q5ZS99 Cluster: Chromosome segregation SMC protein; n=4;
Legionella pneumophila|Rep: Chromosome segregation SMC
protein - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 1164
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K L + G +SF D + F S L ++G NGCGK+ II+ +R+ + R
Sbjct: 3 LKQLKLAGFKSF----VDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRG 58
Query: 225 E 227
E
Sbjct: 59 E 59
>UniRef50_Q21JJ0 Cluster: Chromosome segregation protein SMC; n=17;
Gammaproteobacteria|Rep: Chromosome segregation protein
SMC - Saccharophagus degradans (strain 2-40 / ATCC 43961
/ DSM 17024)
Length = 1168
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+KS+ + G +SF D + F S L ++G NGCGK+ II+ +R+ + R
Sbjct: 3 LKSIKLAGFKSF----VDPTTVNFPSNLCSVVGPNGCGKSNIIDAVRWVMGESSAKNLRG 58
Query: 225 E 227
E
Sbjct: 59 E 59
>UniRef50_UPI0000DAE66B Cluster: hypothetical protein
Rgryl_01000902; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000902 - Rickettsiella
grylli
Length = 1176
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
++S+ + G +SF D + F + LT ++G NGCGK+ II+ +R+ +
Sbjct: 3 LESIQLAGFKSF----VDPTIVSFPTNLTAVVGPNGCGKSNIIDAIRWVM 48
>UniRef50_Q6MNS9 Cluster: Chromosome segregation SMC protein; n=1;
Bdellovibrio bacteriovorus|Rep: Chromosome segregation
SMC protein - Bdellovibrio bacteriovorus
Length = 1195
Score = 38.3 bits (85), Expect = 0.20
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K + + G +SF D I FD+ +T I+G NGCGK+ I++ L + + Q
Sbjct: 3 IKKIELIGFKSF----KDRTVIHFDAGITGIVGPNGCGKSNIVDALMWVMGDQ 51
>UniRef50_Q1QDX0 Cluster: SMC protein-like; n=4;
Gammaproteobacteria|Rep: SMC protein-like -
Psychrobacter cryohalolentis (strain K5)
Length = 1318
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+KSL + G +SF T F +T I+G NGCGK+ +I+ +R+ +
Sbjct: 3 LKSLKLAGFKSFANPTT----FTFRHGITAIVGPNGCGKSNVIDAIRWVL 48
>UniRef50_Q0AYV7 Cluster: Chromosome segregation SMC protein; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Chromosome segregation SMC protein - Syntrophomonas
wolfei subsp. wolfei (strain Goettingen)
Length = 1191
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K L I+G +SF D + + L +++G NGCGK+ I++ +R+ +
Sbjct: 3 LKRLDIKGFKSFA----DNTELQLNPGLNIVVGPNGCGKSNIVDAIRWVL 48
>UniRef50_A6FI30 Cluster: Chromosome segregation ATPase, sms; n=1;
Moritella sp. PE36|Rep: Chromosome segregation ATPase,
sms - Moritella sp. PE36
Length = 1160
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + I G +SF D + F +T ++G NGCGK+ II+ +R+ +
Sbjct: 3 LKKIKISGFKSF----VDTTELHFPHDMTAVVGPNGCGKSNIIDAVRWVL 48
>UniRef50_P58302 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Thermoplasma volcanium|Rep: DNA
double-strand break repair rad50 ATPase - Thermoplasma
volcanium
Length = 895
Score = 38.3 bits (85), Expect = 0.20
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAI 194
I FD+ + +I+GQNG GK++I++ +R+A+
Sbjct: 19 IYFDTGINMIIGQNGAGKSSIVDAIRFAL 47
>UniRef50_Q8RCY8 Cluster: ATPase involved in DNA repair; n=3;
Thermoanaerobacter|Rep: ATPase involved in DNA repair -
Thermoanaerobacter tengcongensis
Length = 1177
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
L I G+ SF E +L + L I G G GK+TII+ + ++ G++P S++
Sbjct: 6 LKISGVNSFTEEQVINFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNSKD 62
>UniRef50_Q84EX7 Cluster: SMC protein; n=5; Geobacter|Rep: SMC
protein - Geobacter sulfurreducens
Length = 1175
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L I G +SF D+ F +T I+G NGCGK+ +++ +R+A+ Q
Sbjct: 3 IKRLDIVGFKSF----VDKVSFDFQQGITGIVGPNGCGKSNVVDAIRWAMGEQ 51
>UniRef50_Q7ZAJ7 Cluster: SMC family protein; n=11; Shewanella|Rep:
SMC family protein - Shewanella oneidensis
Length = 1145
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF D +I F L+ I+G NGCGK+ +I+ +R+ +
Sbjct: 3 LKQIKLAGFKSF----VDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVL 48
>UniRef50_Q5SJV3 Cluster: Chromosome segregation SMC protein; n=2;
Thermus thermophilus|Rep: Chromosome segregation SMC
protein - Thermus thermophilus (strain HB8 / ATCC 27634
/ DSM 579)
Length = 1008
Score = 37.9 bits (84), Expect = 0.27
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
L ++G +SF D + F P+T I+G NG GK+ ++E +R+ +TG R E
Sbjct: 10 LVLQGFKSFA----DRTLLDFPDPVTGIIGPNGSGKSNLVEAIRF-VTGSRAQDLRGE 62
>UniRef50_Q1PZG8 Cluster: Similar to structural maintenance of
chromosome (Smc) seggregation ATPase protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
structural maintenance of chromosome (Smc) seggregation
ATPase protein - Candidatus Kuenenia stuttgartiensis
Length = 1207
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/53 (28%), Positives = 33/53 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L + G +SF ++ ++F+ + +I+G NGCGK+ I++ +++ + Q
Sbjct: 3 LKKLELFGFKSFA----EKTEVVFEDGINVIVGPNGCGKSNIVDAVKWVLGEQ 51
>UniRef50_Q1D2R5 Cluster: Chromosome segregation protein SMC; n=1;
Myxococcus xanthus DK 1622|Rep: Chromosome segregation
protein SMC - Myxococcus xanthus (strain DK 1622)
Length = 1200
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L I G +SF + FD +T I+G NGCGK+ +++ +R+ + Q
Sbjct: 3 IKRLDITGFKSF----MERSVFTFDEGVTGIVGPNGCGKSNVVDAIRWVMGEQ 51
>UniRef50_Q16C15 Cluster: Putative uncharacterized protein; n=1;
Roseobacter denitrificans OCh 114|Rep: Putative
uncharacterized protein - Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) (Erythrobactersp. (strain
OCh 114)) (Roseobacter denitrificans)
Length = 650
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 123 PLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
P+ L++G NG GKTT +E +R A+ G+ G+R
Sbjct: 31 PVVLVVGHNGAGKTTFLESVRLALYGKRALGAR 63
>UniRef50_Q15UZ3 Cluster: Chromosome segregation protein SMC; n=1;
Pseudoalteromonas atlantica T6c|Rep: Chromosome
segregation protein SMC - Pseudoalteromonas atlantica
(strain T6c / BAA-1087)
Length = 1164
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K + + G +SF D I F +T I+G NGCGK+ +I+ +R+ + R
Sbjct: 3 LKKIKLAGFKSF----VDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRG 58
Query: 225 ECFV 236
+ +
Sbjct: 59 DAMI 62
>UniRef50_Q0BQZ0 Cluster: Chromosome partition protein smc; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Chromosome
partition protein smc - Granulobacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1)
Length = 1523
Score = 37.9 bits (84), Expect = 0.27
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
L I G +SF D Q I LT ++G NGCGK+ ++E LR+A+
Sbjct: 8 LRIAGFKSFA----DPQSIEILPGLTGVVGPNGCGKSNVVEALRWAM 50
>UniRef50_A5WCN1 Cluster: SMC domain protein; n=1; Psychrobacter sp.
PRwf-1|Rep: SMC domain protein - Psychrobacter sp.
PRwf-1
Length = 1280
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+KSL + G +SF T F +T I+G NGCGK+ +I+ +R+ +
Sbjct: 3 LKSLKLSGFKSFANPTT----FSFRHGITAIVGPNGCGKSNVIDAIRWVL 48
>UniRef50_O29230 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair rad50 ATPase - Archaeoglobus
fulgidus
Length = 886
Score = 37.9 bits (84), Expect = 0.27
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K L I+ RS + +I FD+ + LI G+NG GK++I+E + A G P R
Sbjct: 4 LKELQIKNFRSHS-----DSKIEFDTGINLIAGRNGAGKSSILEAILVAFYGLKPATLRK 58
Query: 225 ECFV 236
V
Sbjct: 59 NDLV 62
>UniRef50_Q9PR04 Cluster: P115 protein; n=1; Ureaplasma parvum|Rep:
P115 protein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 981
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
M +K + G +SFG E F P+T I+G NG GK+ II+ L++ I Q
Sbjct: 1 MIFLKKIEAHGFKSFGEPVVIE----FKHPMTGIIGANGTGKSNIIDALKWVIGDQ 52
>UniRef50_Q3XYC2 Cluster: Exonuclease SbcC; n=2; cellular
organisms|Rep: Exonuclease SbcC - Enterococcus faecium
DO
Length = 1042
Score = 37.5 bits (83), Expect = 0.35
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +3
Query: 69 IRSFGP---EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+++FGP E D R L ++PL LI G+ G GKTTI + + +A+ G+
Sbjct: 8 LKNFGPFINETVDFSR-LTEAPLFLISGKTGAGKTTIFDGITFALFGE 54
>UniRef50_Q1GQU3 Cluster: Chromosome segregation protein SMC; n=7;
Sphingomonadales|Rep: Chromosome segregation protein SMC
- Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 1147
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
+K L + G +SF + E RI + LT ++G NGCGK+ ++E +R+ + G+ P S
Sbjct: 3 IKRLRLTGFKSF--VEPTELRI--EPGLTGVVGPNGCGKSNLLEAIRW-VMGESSPKS 55
>UniRef50_A4XDL1 Cluster: ABC transporter related; n=3;
Bacteria|Rep: ABC transporter related - Salinispora
tropica CNB-440
Length = 271
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 36 MAGVKSLAIRGI-RSFGPEDT--DEQRILFDSPLTLILGQNGCGKTTIIECL 182
M+ L +RGI +SFGP D F +T ++G NG GK+T+++C+
Sbjct: 1 MSATPLLELRGIDKSFGPVQVLRDVAFSAFPGQVTALVGDNGAGKSTLVKCI 52
>UniRef50_A3WLJ3 Cluster: Exonuclease SbcC, putative; n=1;
Idiomarina baltica OS145|Rep: Exonuclease SbcC, putative
- Idiomarina baltica OS145
Length = 1022
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQ---RILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L ++ +++FGP T + +L + PL LI G G GKTT+++ + +A+ G+
Sbjct: 1 MKPLVLK-MQAFGPFPTQQSINFTLLGEHPLFLINGATGAGKTTLLDAISFALYGE 55
>UniRef50_A0WCV8 Cluster: Chromosome segregation protein SMC; n=2;
Desulfuromonadales|Rep: Chromosome segregation protein
SMC - Geobacter lovleyi SZ
Length = 1177
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K L I G +SF D+ + F +T ++G NGCGK+ I++ +R+ + Q R
Sbjct: 3 IKRLEIAGFKSFA----DKVVLDFQQGVTGVVGPNGCGKSNIVDAMRWCMGEQSAKNLRG 58
Query: 225 E 227
+
Sbjct: 59 K 59
>UniRef50_UPI0000510427 Cluster: COG1196: Chromosome segregation
ATPases; n=1; Brevibacterium linens BL2|Rep: COG1196:
Chromosome segregation ATPases - Brevibacterium linens
BL2
Length = 1199
Score = 37.1 bits (82), Expect = 0.46
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+KSL +RG +SF T + F+ +T ++G NG GK+ +++ L + + Q
Sbjct: 3 LKSLTLRGFKSFASATT----LRFEPGITCVVGPNGSGKSNVVDALSWVMGEQ 51
>UniRef50_Q89U26 Cluster: Bll1593 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll1593 protein - Bradyrhizobium
japonicum
Length = 810
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+ D+P LI G NG GKT+++ + A+TG +P +R
Sbjct: 22 VSLDAPAVLIHGPNGTGKTSLLSSIELALTGSVPSLAR 59
>UniRef50_Q82J56 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 684
Score = 37.1 bits (82), Expect = 0.46
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG-SRNEC 230
L + R+F T + + P LI G NG GKTT++ +A+ G+ + +
Sbjct: 6 LTLDNFRAFYGRQTLDLAVNDSKPAVLIFGNNGAGKTTLLNAFAWALYGKFSADVEQQQR 65
Query: 231 FVHDAK 248
+HD K
Sbjct: 66 VIHDHK 71
>UniRef50_Q6MB38 Cluster: Putative chromosome segregation SMC
protein; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative chromosome segregation SMC protein -
Protochlamydia amoebophila (strain UWE25)
Length = 1179
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+K L G +SF D+ + FD +T I+G NGCGK+ I + R+ + Q R
Sbjct: 3 LKKLMAVGFKSFA----DKTVLNFDRGITCIVGPNGCGKSNIADAFRWVLGEQSAKSMR 57
>UniRef50_Q18BB2 Cluster: Chromosome partition protein; n=3;
Clostridium difficile|Rep: Chromosome partition protein
- Clostridium difficile (strain 630)
Length = 1184
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L ++G +SF P TD I+F +T I+G NG GK+ I + +R+ + Q
Sbjct: 3 LKRLELKGFKSF-PVKTD---IIFKEGITAIVGPNGSGKSNISDAVRWVLGEQ 51
>UniRef50_A7H886 Cluster: Chromosome segregation protein SMC; n=2;
Anaeromyxobacter|Rep: Chromosome segregation protein SMC
- Anaeromyxobacter sp. Fw109-5
Length = 1198
Score = 37.1 bits (82), Expect = 0.46
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
++ L I G +SF D+ + FD +T ++G NGCGK+ + + +R+ + Q
Sbjct: 3 IRRLDIVGFKSF----MDKTVVAFDEGVTGVVGPNGCGKSNVADAIRWVLGEQ 51
>UniRef50_A5W4N1 Cluster: ATPase involved in DNA repair-like
protein; n=1; Pseudomonas putida F1|Rep: ATPase involved
in DNA repair-like protein - Pseudomonas putida F1
Length = 929
Score = 37.1 bits (82), Expect = 0.46
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPP--GSRNEC 230
DE + D+PLT+I NG GK+TI L + +TG++ G+ EC
Sbjct: 21 DELVVPLDAPLTVIHAANGTGKSTICYALEWLVTGKVDDLNGAALEC 67
>UniRef50_A4J5A9 Cluster: Putative uncharacterized protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 617
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
D + I F+ L ++G G GKTT+IE LR+A+ PPG+
Sbjct: 20 DGEVIHFNPHLNCLIGGRGSGKTTVIEMLRFALDA-YPPGT 59
>UniRef50_A4F8B2 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep: Putative
ATP-dependent dsDNA exonuclease - Saccharopolyspora
erythraea (strain NRRL 23338)
Length = 984
Score = 37.1 bits (82), Expect = 0.46
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +3
Query: 69 IRSFGPEDTDEQRILFDS----PLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
+ +FGP D Q + FD+ L L+ G G GKTT+++ + +AI G + PG+R E
Sbjct: 8 VTAFGPY-RDTQSVDFDTLGSDGLFLLHGDTGAGKTTLLDAVAFAIYGAV-PGARGE 62
>UniRef50_A3VKW1 Cluster: Putative uncharacterized protein; n=2;
Rhodobacterales|Rep: Putative uncharacterized protein -
Rhodobacterales bacterium HTCC2654
Length = 543
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 30 YNMAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
Y++ G SL I+ + + F++ L +I+G N GK+T++E + A+TGQ+
Sbjct: 4 YSIMGGASLFIQRAVIRNYRCLKQANVTFNNELNVIVGNNESGKSTLLEAIHLALTGQL 62
>UniRef50_A1S519 Cluster: Exonuclease SbcC, putative; n=1;
Shewanella amazonensis SB2B|Rep: Exonuclease SbcC,
putative - Shewanella amazonensis (strain ATCC BAA-1098
/ SB2B)
Length = 1020
Score = 37.1 bits (82), Expect = 0.46
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+LAI F T + R L + PL LI G G GKTTI++ + +A+ G+ R
Sbjct: 5 TLAITAFGPFVDTQTLDFRALGEWPLFLINGPTGAGKTTILDAICFALYGKTTGNER 61
>UniRef50_A0HJB9 Cluster: SMC protein-like; n=1; Comamonas
testosteroni KF-1|Rep: SMC protein-like - Comamonas
testosteroni KF-1
Length = 1069
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSP--LTLILGQNGCGKTTIIECLRYAITGQM 206
++ L I+G RS+ E TD + F + LT+I+G NG GK+T+ + + + +TG++
Sbjct: 60 LEKLKIKGFRSYKSE-TD---VTFSAGPGLTVIVGPNGLGKSTLFDAVEWGLTGEL 111
>UniRef50_Q8K4R1 Cluster: Barmotin; n=2; cellular organisms|Rep:
Barmotin - Rattus norvegicus (Rat)
Length = 1184
Score = 36.7 bits (81), Expect = 0.61
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+KSL I G +SF D+ I F +T I+G NG GK+ IIE +R+ + Q
Sbjct: 3 LKSLEISGFKSFA----DKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQ 51
>UniRef50_Q5LNH7 Cluster: SMC protein; n=29; Bacteria|Rep: SMC
protein - Silicibacter pomeroyi
Length = 1151
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
L + G +SF D ++ LT I+G NGCGK+ ++E LR+ + P R
Sbjct: 6 LKLTGFKSF----VDPTDLIIADGLTGIVGPNGCGKSNLLEALRWVMGENRPKAMR 57
>UniRef50_Q48MS3 Cluster: ATP binding protein; n=1; Pseudomonas
syringae pv. phaseolicola 1448A|Rep: ATP binding protein
- Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 504
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 33 NMAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
N+ + +L ++ R FG + D FD LT+++ NG GKTTI++ R A+
Sbjct: 48 NIVRLDTLRMQNYRCFGEFEID-----FDPHLTILIASNGGGKTTILDAARVAL 96
>UniRef50_Q252K0 Cluster: DNA replication and repair protein recF;
n=2; Desulfitobacterium hafniense|Rep: DNA replication
and repair protein recF - Desulfitobacterium hafniense
(strain Y51)
Length = 365
Score = 36.7 bits (81), Expect = 0.61
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L ++ R++ ++ D F LT++ G+NG GKT I+E + Y +TG+
Sbjct: 3 IKWLHLKSFRNYQDQEVD-----FRPGLTILQGENGQGKTNILEGIYYLLTGK 50
>UniRef50_A5EVD4 Cluster: Chromosome segregation SMC family protein;
n=1; Dichelobacter nodosus VCS1703A|Rep: Chromosome
segregation SMC family protein - Dichelobacter nodosus
(strain VCS1703A)
Length = 1127
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +3
Query: 105 RILF--DSPLTLILGQNGCGKTTIIECLRYAI 194
R LF D+P+T I+G NGCGK+ I++ +R+ +
Sbjct: 17 RALFPVDAPITGIIGPNGCGKSNIVDAVRWVL 48
>UniRef50_A4B6B5 Cluster: Chromosome segregation ATPase, sms; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Chromosome
segregation ATPase, sms - Alteromonas macleodii 'Deep
ecotype'
Length = 1195
Score = 36.7 bits (81), Expect = 0.61
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF T I F +T I+G NGCGK+ +I+ +R+ +
Sbjct: 3 LKKIKLAGFKSFVEPTT----IPFPGEMTAIVGPNGCGKSNVIDAVRWVL 48
>UniRef50_A1ICT1 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 234
Score = 36.7 bits (81), Expect = 0.61
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYA 191
++I F+SP+T +G+NG GK+T++E L A
Sbjct: 32 RQIRFESPVTFFVGENGTGKSTLLEALALA 61
>UniRef50_A0KHL7 Cluster: Chromosome segregation protein SMC; n=2;
Aeromonas|Rep: Chromosome segregation protein SMC -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 1124
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF + RI ++ +T ++G NGCGK+ +I+ +R+ +
Sbjct: 3 LKLIKLAGFKSF----VEPTRIELNADMTAVVGPNGCGKSNVIDAVRWVL 48
>UniRef50_A7DNR0 Cluster: SMC domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: SMC domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 693
Score = 36.7 bits (81), Expect = 0.61
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+ ++ FD+ +T+ +G NG GK++II+ + +A+ GQ
Sbjct: 15 DTKLEFDNGVTVFVGHNGAGKSSIIDAITFALFGQ 49
>UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 937
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
D +TL+ +GCGK+TIIE + +AI G PG
Sbjct: 21 DYGVTLLSAPSGCGKSTIIESIMFAIYGGNAPG 53
>UniRef50_Q9WZ07 Cluster: Putative uncharacterized protein; n=2;
Thermotoga|Rep: Putative uncharacterized protein -
Thermotoga maritima
Length = 758
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 120 SPLTLILGQNGCGKTTIIECLRYAITGQMP 209
S L +I G N GKTT+ +RY +TG++P
Sbjct: 23 SGLNIIFGGNAAGKTTLANFIRYCLTGELP 52
>UniRef50_Q830T3 Cluster: Exonuclease SbcC; n=1; Enterococcus
faecalis|Rep: Exonuclease SbcC - Enterococcus faecalis
(Streptococcus faecalis)
Length = 1045
Score = 36.3 bits (80), Expect = 0.81
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 69 IRSFGP--EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+++FGP +T + DS L LI G+ G GKTTI + + YA+ G+
Sbjct: 8 LKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGE 54
>UniRef50_Q6HMN5 Cluster: Putative uncharacterized protein; n=1;
Bacillus thuringiensis serovar konkukian|Rep: Putative
uncharacterized protein - Bacillus thuringiensis subsp.
konkukian
Length = 602
Score = 36.3 bits (80), Expect = 0.81
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+ ++ F SP+T+++G+NGCGK++ ++ L A G+
Sbjct: 42 DTKLTFGSPVTVLVGKNGCGKSSALQALYGAPKGK 76
>UniRef50_Q6FDW2 Cluster: Putative chromosome segregation ATPases;
n=2; Acinetobacter|Rep: Putative chromosome segregation
ATPases - Acinetobacter sp. (strain ADP1)
Length = 1149
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ SL + G +SF D + F + T ++G NGCGK+ +I+ +R+ +
Sbjct: 3 LSSLKLAGFKSFA----DSATLHFKANRTAVVGPNGCGKSNVIDAIRWVM 48
>UniRef50_Q2RM30 Cluster: Putative uncharacterized protein; n=1;
Moorella thermoacetica ATCC 39073|Rep: Putative
uncharacterized protein - Moorella thermoacetica (strain
ATCC 39073)
Length = 729
Score = 36.3 bits (80), Expect = 0.81
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPP 212
+K + + G + F +Q I D+ + ++ G NG GKT+ IE L TG++ P
Sbjct: 7 IKEITLEGFKCF----FKKQSINCDADVIILTGNNGFGKTSFIEALELMATGKIEP 58
>UniRef50_O50349 Cluster: Putative uncharacterized protein orf-495;
n=1; Lactobacillus helveticus|Rep: Putative
uncharacterized protein orf-495 - Lactobacillus
helveticus
Length = 495
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQ--RILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
+K + + +SF +++++ I F S + ++G N GKTTI+ L + TG
Sbjct: 3 IKKMVLHNFKSFSSNNSEDEDIEIPFASGVNYLVGNNNVGKTTILNALDFLTTG 56
>UniRef50_A7CRM1 Cluster: AAA ATPase; n=1; Opitutaceae bacterium
TAV2|Rep: AAA ATPase - Opitutaceae bacterium TAV2
Length = 287
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +3
Query: 114 FDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
F +P+T +G+NG GK+T++E L A++ ++PP +
Sbjct: 60 FRTPVTFFVGENGSGKSTLLEAL--ALSAKLPPAT 92
>UniRef50_A1IE18 Cluster: Chromosome segregation protein SMC; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Chromosome
segregation protein SMC - Candidatus Desulfococcus
oleovorans Hxd3
Length = 1204
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+K L I G +SF PE + I F + I+G NGCGK+ II+ L++ + Q
Sbjct: 3 LKRLEINGFKSF-PE---KATISFPPGIFSIVGPNGCGKSNIIDALKWVMGEQ 51
>UniRef50_A6UUX2 Cluster: SMC domain protein; n=1; Methanococcus
aeolicus Nankai-3|Rep: SMC domain protein -
Methanococcus aeolicus Nankai-3
Length = 994
Score = 36.3 bits (80), Expect = 0.81
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K++ I+ RS D I F +T I+G+NG GK++I E + YA+
Sbjct: 3 IKNINIKNFRSHSNTD-----ISFKQGITTIIGENGSGKSSIFEAMNYAL 47
>UniRef50_UPI000038E4E1 Cluster: hypothetical protein Faci_03000671;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000671 - Ferroplasma acidarmanus fer1
Length = 894
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAK 248
+ I F+ + +I G+NG GKT+I++ +++A+ + +N + K
Sbjct: 15 ENTEITFEQGINIITGKNGAGKTSILDAIKFALFAESRNNEKNNELIKKGK 65
>UniRef50_Q5YQ97 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=1; Nocardia farcinica|Rep: Putative ATP-dependent
dsDNA exonuclease - Nocardia farcinica
Length = 1060
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
L L+ GQ G GKTT+++ + +A+ G++ PG+R E
Sbjct: 30 LFLLHGQTGAGKTTVLDAIAFALYGRV-PGARGE 62
>UniRef50_Q3IKC0 Cluster: Putative SMC family protein; n=2;
Alteromonadales|Rep: Putative SMC family protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 1137
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ ++ + G +SF + +I F +T ++G NGCGK+ +I+ +R+ +
Sbjct: 3 LSTIKLAGFKSF----VEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVL 48
>UniRef50_Q38UV7 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
uncharacterized protein - Lactobacillus sakei subsp.
sakei (strain 23K)
Length = 789
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +3
Query: 60 IRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVH 239
I+ I+ G + D Q IL L ++G G GK++IIE +RYA+ + P + ++ + +
Sbjct: 188 IKSIQFIGGK-LDAQEILLSPELNSLIGIRGSGKSSIIESIRYAL--DIAPSTADKEYKN 244
Query: 240 DAKVN 254
D N
Sbjct: 245 DVVKN 249
>UniRef50_Q03FW9 Cluster: Chromosome segregation ATPase; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Chromosome
segregation ATPase - Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w)
Length = 1176
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
++++ I G +SF D +I F +T I+G NG GK+ IIE +R+ +
Sbjct: 3 LRTIEISGFKSFA----DNTKIEFKDGITGIVGPNGSGKSNIIEAIRWVM 48
>UniRef50_A6NVW8 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 256
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+R+ F P+T +G+NG GK+T++E + A GSRN
Sbjct: 36 KRLEFRRPVTFFVGENGSGKSTLLEAIAVAWGFNPEGGSRN 76
>UniRef50_A5FGE6 Cluster: AAA ATPase; n=1; Flavobacterium johnsoniae
UW101|Rep: AAA ATPase - Flavobacterium johnsoniae UW101
Length = 410
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
++ L+I+ R+ D++ F S +TLI G NG GKT I++ L A++ +P
Sbjct: 3 IRELSIKNFRAL----EDDRHFEFHSNITLIAGVNGKGKTAILDALVLALSRLVP 53
>UniRef50_A4CFQ6 Cluster: Putative SMC family protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative SMC family
protein - Pseudoalteromonas tunicata D2
Length = 1141
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ ++ + G +SF + +I F +T ++G NGCGK+ +I+ +R+ +
Sbjct: 3 LSTIKLAGFKSF----VEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVL 48
>UniRef50_A3VYF2 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. 217|Rep: Putative uncharacterized
protein - Roseovarius sp. 217
Length = 674
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLR 185
++ L ++ R FG E+ I D +T +G NG GKTT+++ L+
Sbjct: 3 IRELRLKNFRCFGDH---EEVISLDPEMTAFIGDNGSGKTTVLKALQ 46
>UniRef50_A1ZW09 Cluster: ATPase involved in DNA repair, putative;
n=1; Microscilla marina ATCC 23134|Rep: ATPase involved
in DNA repair, putative - Microscilla marina ATCC 23134
Length = 1028
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
L ++G+ S+ + + L DS L I G G GK+TI+E + YA+ GQ+
Sbjct: 6 LTLQGVYSYQKKAEIDFTKLTDSGLFGIFGMVGSGKSTILESISYALYGQV 56
>UniRef50_A0YK44 Cluster: ATP/GTP-binding protein; n=1; Lyngbya sp.
PCC 8106|Rep: ATP/GTP-binding protein - Lyngbya sp. PCC
8106
Length = 447
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 39 AGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+ +KS ++ G+ FG T I FD + +++G+NG GKT I+ Y + G+
Sbjct: 4 SNIKSFSVYGL--FG---THNVHIPFDENIKILIGENGLGKTQILNMFYYTLDGK 53
>UniRef50_A0KYG9 Cluster: Exonuclease SbcC, putative; n=15;
Shewanella|Rep: Exonuclease SbcC, putative - Shewanella
sp. (strain ANA-3)
Length = 1018
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI----TGQMPPGS 218
+L++ F T + L D+PL LI G G GKTT+++ + +A+ TG GS
Sbjct: 5 TLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGICFALYGKTTGNEREGS 64
Query: 219 RNECFVHDAKVNDQQKYS 272
+ C + D + + +S
Sbjct: 65 QMRCDMADDNLLTEVTFS 82
>UniRef50_Q2NFC5 Cluster: DNA double-strand break repair protein
Rad50; n=1; Methanosphaera stadtmanae DSM 3091|Rep: DNA
double-strand break repair protein Rad50 -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 902
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 105 RILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
+I F ++LILG+NG GK++I+E + YA Q+
Sbjct: 18 KIEFKKGISLILGENGAGKSSILEAISYAFFKQV 51
>UniRef50_A5UJE7 Cluster: Purine NTPase involved in DNA repair,
Rad50; n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Purine NTPase involved in DNA repair, Rad50 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 917
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
L + +S+G E I F +T+I+G+NG GK+TI+E + +A+ Q
Sbjct: 6 LTLNNFKSYGHEV-----IKFGDGITVIVGENGAGKSTILEAISFALFKQ 50
>UniRef50_O26640 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair rad50 ATPase
- Methanobacterium thermoautotrophicum
Length = 837
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
++SL ++ IRS+ + R+ FD +TL G G GKTT++ + +A+ G
Sbjct: 3 IRSLELKNIRSY-----ESGRVEFDDGVTLFEGDIGSGKTTLLLAVEFALFG 49
>UniRef50_Q6AXE3 Cluster: Abca3 protein; n=10; Tetrapoda|Rep: Abca3
protein - Mus musculus (Mouse)
Length = 1449
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDT----DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+AG+K + + G +D D L++ +T++LG NG GKTT + L TG
Sbjct: 527 VAGIKIKHLSKVFQVGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSLL----TGL 582
Query: 204 MPPGSRNECFVHDAKVN 254
PP S ++H +++
Sbjct: 583 FPPTS-GHAYIHGYEIS 598
>UniRef50_Q46YP7 Cluster: Putative uncharacterized protein; n=2;
Burkholderiaceae|Rep: Putative uncharacterized protein -
Ralstonia eutropha (strain JMP134) (Alcaligenes
eutrophus)
Length = 579
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
I+ +P++LI G NG GK+++ E +R A+TG+
Sbjct: 19 IITATPVSLICGPNGAGKSSVQEAVRMALTGE 50
>UniRef50_Q38ZD2 Cluster: Putative DNA-repair ATPase; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
DNA-repair ATPase - Lactobacillus sakei subsp. sakei
(strain 23K)
Length = 680
Score = 35.5 bits (78), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
D +TLI+ +NG GKTT ++ R+ G+ P
Sbjct: 26 DRKITLIIARNGVGKTTFLQAFRFCFYGESP 56
>UniRef50_Q1QZQ0 Cluster: Chromosome segregation protein SMC; n=3;
Gammaproteobacteria|Rep: Chromosome segregation protein
SMC - Chromohalobacter salexigens (strain DSM 3043 /
ATCC BAA-138 / NCIMB13768)
Length = 1164
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
S+ + G +SF D + F +T I+G NGCGK+ II+ +R+ +
Sbjct: 5 SIKLVGFKSF----VDAVNVPFAGNMTAIVGPNGCGKSNIIDAVRWVM 48
>UniRef50_Q0AMJ6 Cluster: Chromosome segregation protein SMC; n=2;
Hyphomonadaceae|Rep: Chromosome segregation protein SMC
- Maricaulis maris (strain MCS10)
Length = 1148
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
L + G +SF + E RI D LT ++G NGCGK+ ++E LR+ +
Sbjct: 6 LRLAGFKSF--VEPTELRI--DPGLTGVIGPNGCGKSNLLEALRWVM 48
>UniRef50_Q0AAV4 Cluster: Chromosome segregation protein SMC; n=2;
Ectothiorhodospiraceae|Rep: Chromosome segregation
protein SMC - Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 1168
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF D ++ L ++G NGCGK+ II+ +R+ +
Sbjct: 3 LKKIKLSGFKSF----VDPTQVAMPGDLVAVVGPNGCGKSNIIDAVRWVM 48
>UniRef50_A5VKD5 Cluster: AAA ATPase; n=1; Lactobacillus reuteri
F275|Rep: AAA ATPase - Lactobacillus reuteri F275
Length = 537
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
Q+I F+ +++G NG GKTT+I+ LR + G
Sbjct: 18 QKITFNRNKNILVGNNGVGKTTVIQALRLILKG 50
>UniRef50_A4ILD6 Cluster: Putative uncharacterized protein; n=1;
Geobacillus thermodenitrificans NG80-2|Rep: Putative
uncharacterized protein - Geobacillus
thermodenitrificans (strain NG80-2)
Length = 937
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFD--SPLTLILGQNGCGKTTIIECLRYAITGQM 206
+ S+ I+ + FG +++ +LF+ ++ NG GKT+ E L YA+T +
Sbjct: 82 INSVQIKNFKGFGQISDEDRGVLFEFNKYKNILFAPNGGGKTSFCEALEYALTNNI 137
>UniRef50_A3KWT1 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa C3719|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa C3719
Length = 654
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
LFD L LI G NG GK+T + Y + G++ SR E
Sbjct: 22 LFDENLILIEGDNGTGKSTFCNLIYYGLGGRVSEFSRKE 60
>UniRef50_A0Z2Y7 Cluster: Recombination protein F; n=1; marine gamma
proteobacterium HTCC2080|Rep: Recombination protein F -
marine gamma proteobacterium HTCC2080
Length = 376
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 81 GPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
G + QR++ S + LI G NG GK++I+E L TG+
Sbjct: 17 GVRNLSAQRLVMGSEINLISGPNGSGKSSIVEALSMLSTGR 57
>UniRef50_Q9VRG4 Cluster: CG1718-PA; n=3; Sophophora|Rep: CG1718-PA
- Drosophila melanogaster (Fruit fly)
Length = 1713
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
+F+ +T++LG NG GKTT I L TG PP S
Sbjct: 538 MFEDEITVLLGHNGAGKTTTISML----TGMFPPTS 569
>UniRef50_Q9KM67 Cluster: Nuclease sbcCD subunit C; n=17; Vibrio
cholerae|Rep: Nuclease sbcCD subunit C - Vibrio cholerae
Length = 1013
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 69 IRSFGP----EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+++FGP E+ D + L D+PL LI G G GK++I++ + YA+ G+ R
Sbjct: 8 LQAFGPFAGREEIDFTK-LGDAPLFLINGATGAGKSSILDAICYALYGETTGSER 61
>UniRef50_Q8R420 Cluster: ATP-binding cassette sub-family A member
3; n=18; Euteleostomi|Rep: ATP-binding cassette
sub-family A member 3 - Mus musculus (Mouse)
Length = 1704
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDT----DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+AG+K + + G +D D L++ +T++LG NG GKTT + L TG
Sbjct: 527 VAGIKIKHLSKVFQVGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSLL----TGL 582
Query: 204 MPPGSRNECFVHDAKVN 254
PP S ++H +++
Sbjct: 583 FPPTS-GRAYIHGYEIS 598
>UniRef50_UPI0000ECD324 Cluster: helicase (DNA) B; n=2; Gallus
gallus|Rep: helicase (DNA) B - Gallus gallus
Length = 926
Score = 35.1 bits (77), Expect = 1.9
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 120 SPLTLILGQNGCGKTTIIECL 182
+P+T+I G+ GCGK+TI+ CL
Sbjct: 443 NPVTIISGKGGCGKSTIVSCL 463
>UniRef50_Q4SGQ6 Cluster: Chromosome 3 SCAF14593, whole genome
shotgun sequence; n=4; Tetraodontidae|Rep: Chromosome 3
SCAF14593, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1472
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
+F+S +T++LG NG GKTT + L TG PP S
Sbjct: 449 MFESQITVLLGHNGAGKTTSLSML----TGLFPPTS 480
>UniRef50_Q4L5T6 Cluster: Chromosome segregation SMC protein; n=16;
Staphylococcus|Rep: Chromosome segregation SMC protein -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 1189
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
M +KS+ G +SF + TD Q FD +T I+G NG GK+ I + +++ + Q
Sbjct: 1 MVYLKSIDAIGFKSFA-DHTDVQ---FDKGVTAIVGPNGSGKSNITDAIKWVLGEQ 52
>UniRef50_Q0S3U8 Cluster: ABC transporter, ATP-binding component;
n=1; Rhodococcus sp. RHA1|Rep: ABC transporter,
ATP-binding component - Rhodococcus sp. (strain RHA1)
Length = 238
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
+ F+ P+T+I+G+NG GK+T++E + A G
Sbjct: 37 LAFERPVTVIVGENGVGKSTLVESIAAAWQG 67
>UniRef50_Q6WAV5 Cluster: HmcB; n=2; Pasteurellaceae|Rep: HmcB -
Haemophilus gallinarum
Length = 235
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
I F++P+++ G+NG GK+TI+E L + GS+N
Sbjct: 22 IKFNNPISIFFGENGIGKSTIMESLAVHLGCPAEGGSKN 60
>UniRef50_Q1FFM8 Cluster: ABC transporter related; n=1; Clostridium
phytofermentans ISDg|Rep: ABC transporter related -
Clostridium phytofermentans ISDg
Length = 252
Score = 35.1 bits (77), Expect = 1.9
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
+T ILG NGCGK+T+++CL
Sbjct: 29 ITAILGPNGCGKSTLVQCL 47
>UniRef50_Q1CW77 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 487
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 105 RILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECF 233
R+LF L ++LG+NG GK+T+++ ++ P R+E F
Sbjct: 94 RLLFSPSLNVLLGENGTGKSTLLDLAAAVVSSDFTP-LRHEAF 135
>UniRef50_A5FVJ2 Cluster: Chromosome segregation protein SMC; n=1;
Acidiphilium cryptum JF-5|Rep: Chromosome segregation
protein SMC - Acidiphilium cryptum (strain JF-5)
Length = 1165
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
L I G +SF T + IL LT I+G NGCGK+ +++ LR+A+
Sbjct: 8 LRISGFKSFADPTTID--IL--PGLTGIIGPNGCGKSNVVDALRWAM 50
>UniRef50_A5EI89 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 1326
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 PEDTDEQRILFDSPL--TLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVN 254
P TD R+L D PL TLIL N G+ +++ +R + GS CF+HDA ++
Sbjct: 881 PAATDRNRLLVDGPLDETLIL-VNESGQASVVRNIRGDLV--FDRGSATLCFLHDANLD 936
>UniRef50_A0LM48 Cluster: SMC domain protein; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: SMC domain protein -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 1020
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 69 IRSFGP---EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+ +FGP E + R+L D LI G G GK+T+++ + +A+ G+ G R+
Sbjct: 8 LSAFGPYASEQVFDFRVLGDRSFFLIHGPTGSGKSTLLDAVCFALYGETSGGERD 62
>UniRef50_Q56BZ3 Cluster: Gp46 recombination endonuclease subunit;
n=1; Enterobacteria phage RB43|Rep: Gp46 recombination
endonuclease subunit - Enterobacteria phage RB43
Length = 567
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 129 TLILGQNGCGKTTIIECLRYAITGQ 203
TLI G+NG GK+T+IE L YA+ G+
Sbjct: 31 TLITGKNGGGKSTLIEALTYALFGK 55
>UniRef50_Q0QZ77 Cluster: Gp151; n=2; Myoviridae|Rep: Gp151 - Phage
Syn9
Length = 573
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECLRYAI 194
+SP TLI+G NG GK+TI++ L +A+
Sbjct: 26 ESPSTLIVGTNGAGKSTILDALCFAL 51
>UniRef50_A7RPD5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1313
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 589 KYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKKPDLDQEKLNVVNSR 732
+Y D +DRL + K YA+N +LL+ + A L EK +L + + V R
Sbjct: 979 RYEDEIDRLNRKLKWYAENQQLLDHDAAALKEKDKELKELRETVSRLR 1026
>UniRef50_Q5V611 Cluster: Putrescine ABC transporter ATP-binding
protein; n=1; Haloarcula marismortui|Rep: Putrescine ABC
transporter ATP-binding protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 378
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 72 RSFGPED--TDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDA 245
+SFG D TD + D L +LG +GCGK+T + I+G P S ++ DA
Sbjct: 11 KSFGELDAVTDVSLSVRDGELLCLLGPSGCGKSTTMR----MISGLETPSS-GTVYIGDA 65
Query: 246 KVNDQQKY 269
V D+ Y
Sbjct: 66 DVTDEPAY 73
>UniRef50_O83635 Cluster: Nuclease sbcCD subunit C; n=1; Treponema
pallidum|Rep: Nuclease sbcCD subunit C - Treponema
pallidum
Length = 1047
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 123 PLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
P+ L+ G+ G GKTT+ + + YA+ G+ P G+R E
Sbjct: 27 PIFLVCGKTGSGKTTLFDAIAYALYGK-PLGTRAE 60
>UniRef50_P62135 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Nanoarchaeum equitans|Rep: DNA
double-strand break repair rad50 ATPase - Nanoarchaeum
equitans
Length = 786
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
M VK + + +++ + D F+ + LILG NG GKTT++E + A+ G
Sbjct: 1 MVIVKKVILNNVKTHSKREFD-----FEKGINLILGPNGSGKTTLVESIFLALFG 50
>UniRef50_UPI000069DF78 Cluster: ATP-binding cassette sub-family A
member 3 (ATP-binding cassette transporter 3)
(ATP-binding cassette 3) (ABC-C transporter).; n=2;
Xenopus tropicalis|Rep: ATP-binding cassette sub-family
A member 3 (ATP-binding cassette transporter 3)
(ATP-binding cassette 3) (ABC-C transporter). - Xenopus
tropicalis
Length = 1577
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFV 236
+++ +T++LG NG GK+T + L TG PP S EC++
Sbjct: 348 MYEGQVTVLLGHNGAGKSTTLSML----TGLSPPSS-GECYI 384
>UniRef50_Q8ZL33 Cluster: ATP binding protein,; n=4;
Enterobacteriaceae|Rep: ATP binding protein, -
Salmonella typhimurium
Length = 396
Score = 34.7 bits (76), Expect = 2.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAI 194
I FD +T+++ NG GKTT+++ +R A+
Sbjct: 19 ITFDEHITILVAPNGAGKTTVLDAIRLAL 47
>UniRef50_Q84HH3 Cluster: SMC protein; n=1; Acidithiobacillus
ferrooxidans|Rep: SMC protein - Thiobacillus
ferrooxidans (Acidithiobacillus ferrooxidans)
Length = 1150
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ ++ ++G +SF + RI F++ +I+G NGCGK+ ++ +R+ +
Sbjct: 3 LSAIILQGFKSF----RESTRIQFNANPVVIIGPNGCGKSNTVDAVRWVL 48
>UniRef50_Q3W787 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 890
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
++S+ ++G R GP R LTL+ G+NG GK++ E A+TG SR
Sbjct: 84 LESIGVQGFRGIGPLAVLPLRP--GPGLTLVTGRNGSGKSSFAEAAEIALTGDTRRWSR 140
>UniRef50_Q187H6 Cluster: Putative conjugative transposon DNA
recombination protein; n=2; Clostridium difficile|Rep:
Putative conjugative transposon DNA recombination
protein - Clostridium difficile (strain 630)
Length = 540
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
++ L I+ + F +D + F++ + +++G NG GK+TI+E + +TG
Sbjct: 3 IRKLKIKNFKCF----SDWFTVDFENGINILVGNNGTGKSTILEAINLVLTG 50
>UniRef50_Q03B98 Cluster: DNA repair ATPase; n=1; Lactobacillus
casei ATCC 334|Rep: DNA repair ATPase - Lactobacillus
casei (strain ATCC 334)
Length = 1041
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 120 SPLTLILGQNGCGKTTIIECLRYAITGQ 203
SPL LI G G GKTTI + L YA+ G+
Sbjct: 27 SPLFLISGPTGSGKTTIFDALIYALYGE 54
>UniRef50_A7HMS6 Cluster: DNA replication and repair protein RecF;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DNA
replication and repair protein RecF - Fervidobacterium
nodosum Rt17-B1
Length = 339
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
++SL +R R F E + F + +I G NG GKT+I+E + Y + G R+
Sbjct: 8 IESLRLRNFRCFS-----EYEVNFKDGINVIYGPNGAGKTSILEAIAYLSNPRSFRGGRD 62
>UniRef50_A6VY51 Cluster: SMC domain protein; n=23; cellular
organisms|Rep: SMC domain protein - Marinomonas sp.
MWYL1
Length = 250
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNDQQKY 269
I FD +T+ +G+NG GK+T++E + ++ G++N F + +D Y
Sbjct: 38 IEFDKAVTIFVGENGSGKSTLLEAIAVSMGFNAEGGTKNFNFGTRSTHSDLHSY 91
>UniRef50_A6P234 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 1098
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 69 IRSFGP---EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVH 239
+ +FGP T + L L LI G G GKTTI + + YA+ G+ P G E +
Sbjct: 8 VSAFGPYAGRVTIDLEKLGPKGLYLITGDTGAGKTTIFDAITYALYGE-PSGDNREVSMF 66
Query: 240 DAK 248
+K
Sbjct: 67 RSK 69
>UniRef50_A6D4U6 Cluster: Exonuclease SbcC, putative; n=1; Vibrio
shilonii AK1|Rep: Exonuclease SbcC, putative - Vibrio
shilonii AK1
Length = 1014
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = +3
Query: 69 IRSFGP---EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI----TGQMPPGSRNE 227
+++FGP +++ + L D PL LI G G GK++I++ + YA+ TG G +
Sbjct: 8 LQAFGPFSGKESIDFSQLGDCPLFLINGPTGSGKSSILDAICYALYGETTGSERTGDQMR 67
Query: 228 CFVHDAK 248
C D+K
Sbjct: 68 CDYADSK 74
>UniRef50_A5VKP1 Cluster: Chromosome segregation protein SMC; n=2;
Lactobacillus reuteri|Rep: Chromosome segregation
protein SMC - Lactobacillus reuteri F275
Length = 1187
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
SL + G +SF + T I F+ +T I+G NG GK+ IIE +++ + Q
Sbjct: 5 SLTLDGFKSFAQKTT----IKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQ 51
>UniRef50_A5ISM9 Cluster: ATPase involved in DNA repair-like
protein; n=13; Staphylococcus aureus|Rep: ATPase
involved in DNA repair-like protein - Staphylococcus
aureus subsp. aureus JH9
Length = 1009
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 69 IRSFGP---EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVH 239
+ +FGP E+ D +I ++ L LI G+ G GKT I + + YA+ G+ R E +
Sbjct: 8 LNNFGPFLKEEIDFSKI-DNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQREENDLR 66
Query: 240 DAKVNDQQKYSV 275
+ +Q SV
Sbjct: 67 SHFADGKQPMSV 78
>UniRef50_A2UXY4 Cluster: Putative phage protein; n=1; Shewanella
putrefaciens 200|Rep: Putative phage protein -
Shewanella putrefaciens 200
Length = 606
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
+ FD L ++ G + GK+ +I+C +Y G+ PP + +E
Sbjct: 18 LCFDKGLNVVAGASDTGKSYVIKCFQYIFGGEEPPKNIDE 57
>UniRef50_A0YBB3 Cluster: Exonuclease SbcC, putative; n=1; marine
gamma proteobacterium HTCC2143|Rep: Exonuclease SbcC,
putative - marine gamma proteobacterium HTCC2143
Length = 1019
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
SL ++ F +++ + L +PL LI G G GK++I++ + +A+ GQ R+
Sbjct: 5 SLTLQAFGPFAGKESLDFAALGSNPLFLINGATGAGKSSILDAICFALYGQTTGAERD 62
>UniRef50_A0Q5B6 Cluster: (Putative) drug resistance ATPase-1 (Drug
RA1) family protein; n=16; Francisella tularensis|Rep:
(Putative) drug resistance ATPase-1 (Drug RA1) family
protein - Francisella tularensis subsp. novicida (strain
U112)
Length = 613
Score = 34.7 bits (76), Expect = 2.5
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 135 ILGQNGCGKTTIIECL 182
I+GQNGCGKTT++ CL
Sbjct: 344 IIGQNGCGKTTLLNCL 359
>UniRef50_Q54V69 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 965
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 132 LILGQNGCGKTTIIECLRYAITGQMPPGSRNEC 230
+ LG G GKTTIIE L +TGQ G + C
Sbjct: 524 MFLGMQGIGKTTIIELLLNILTGQFYDGPKQLC 556
>UniRef50_Q16LB5 Cluster: ATP-binding cassette sub-family A member
3, putative; n=2; Aedes aegypti|Rep: ATP-binding
cassette sub-family A member 3, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 1622
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 18 ENLTYNMAGVKSLAIRGIRSFGPEDTDEQRI-LFDSPLTLILGQNGCGKTTIIECLRYAI 194
E + +GV+ +R + G D + L++ +T++LG NG GKTT + L
Sbjct: 478 EETQFRASGVQIRNLRKVYGSGKVAVDGLSLNLYEGQITVLLGHNGAGKTTTMSML---- 533
Query: 195 TGQMPPGS 218
TG P S
Sbjct: 534 TGMFSPSS 541
>UniRef50_A0B983 Cluster: SMC domain protein; n=1; Methanosaeta
thermophila PT|Rep: SMC domain protein - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 1061
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 108 ILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
I F LT I+G NG GK+TI+E + +A+ G
Sbjct: 19 ITFQDGLTGIIGGNGAGKSTIVEAIAWALYG 49
>UniRef50_Q58718 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Methanocaldococcus jannaschii|Rep: DNA
double-strand break repair rad50 ATPase - Methanococcus
jannaschii
Length = 1005
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
S+ ++ IR + RI F+ + I+G+NG GK++I E + +A+ G
Sbjct: 2 SMILKEIRMNNFKSHVNSRIKFEKGIVAIIGENGSGKSSIFEAVFFALFG 51
>UniRef50_Q9YFZ1 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Aeropyrum pernix|Rep: DNA double-strand
break repair rad50 ATPase - Aeropyrum pernix
Length = 919
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPP 212
+K L +R I S D F T I+G+NG GK+TI+E + ++IT P
Sbjct: 4 LKRLELRNIMSHFNTSID-----FREGFTAIVGRNGAGKSTILEAILFSITPHQAP 54
>UniRef50_UPI0000E88036 Cluster: Chromosome segregation protein SMC;
n=1; Methylophilales bacterium HTCC2181|Rep: Chromosome
segregation protein SMC - Methylophilales bacterium
HTCC2181
Length = 1164
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
++ + + G ++F D I D L I+G NGCGK+ I+E +++ + R
Sbjct: 3 LRQIKLAGFKTF----VDPTTIKLDGELAGIVGPNGCGKSNIMESVKWVLGSSSAKDMRG 58
Query: 225 E 227
E
Sbjct: 59 E 59
>UniRef50_Q982W4 Cluster: ABC transporter, ATP-binding protein; n=6;
Alphaproteobacteria|Rep: ABC transporter, ATP-binding
protein - Rhizobium loti (Mesorhizobium loti)
Length = 258
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECL 182
E + F +P+T+I+G+NG GK+T++E +
Sbjct: 42 EFELEFTAPITIIVGENGTGKSTLLEAI 69
>UniRef50_Q894V4 Cluster: Transporter; n=10; cellular organisms|Rep:
Transporter - Clostridium tetani
Length = 249
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 105 RILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNDQQK 266
+I F +T I+G+NG GK+TI+E + A G+RN F + +D K
Sbjct: 43 KIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNINFSTNDTHSDLHK 96
>UniRef50_Q81GE4 Cluster: ATP/GTP-binding protein; n=1; Bacillus
cereus ATCC 14579|Rep: ATP/GTP-binding protein -
Bacillus cereus (strain ATCC 14579 / DSM 31)
Length = 505
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 57 AIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITG 200
+++GI+ G + + ++F+ + + + +NG GKTTII+ + A+ G
Sbjct: 55 SLKGIKIHGLFNKYDYEVVFNENINIFVAENGHGKTTIIKIIVAALNG 102
>UniRef50_Q6M231 Cluster: ABC-type transport system, ATPase
component; n=4; Corynebacterium|Rep: ABC-type transport
system, ATPase component - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 244
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/29 (48%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +3
Query: 99 EQRIL-FDSPLTLILGQNGCGKTTIIECL 182
E+R+L F +P+T+I G+NG GK+T++E +
Sbjct: 32 EKRMLDFRAPITVITGENGVGKSTLLEAI 60
>UniRef50_Q3W3E7 Cluster: SMC protein, N-terminal:Structural
maintenance of chromosome protein SMC, C-terminal:SMCs
flexible hinge; n=2; Frankia|Rep: SMC protein,
N-terminal:Structural maintenance of chromosome protein
SMC, C-terminal:SMCs flexible hinge - Frankia sp.
EAN1pec
Length = 1263
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+KSL +RG +SF T + + +T ++G NG GK+ +++ + + + Q
Sbjct: 3 LKSLTLRGFKSFASSTT----LHLEPGITCVVGPNGSGKSNVVDAIAWVLGEQ 51
>UniRef50_Q0LWW6 Cluster: SMC protein-like; n=2;
Alphaproteobacteria|Rep: SMC protein-like - Caulobacter
sp. K31
Length = 682
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
+ I G R F D RI F T+I G+NG GK+T+ + + +AI G +
Sbjct: 6 IEICGFRGF----RDLVRINFGRGFTVITGRNGVGKSTLCDAVEFAIIGSI 52
>UniRef50_A7BQ65 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 159
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECL 182
V+ + + R F ++ + F S LT+++G+NG GKTTI++ L
Sbjct: 15 VRKIILENFRGF-----EQLELEFQSDLTVLIGENGAGKTTILDGL 55
>UniRef50_A6NVD9 Cluster: Putative uncharacterized protein; n=2;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 465
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 39 AGVKSLAIRGIRSFGPEDTDEQRILFDSP---LTLILGQNGCGKTTIIECL 182
AG L +R +R+ + + F +P +T I GQNG GKTT+ CL
Sbjct: 258 AGADGLMVRELRATYNGAAVWEGVSFHAPRGQITAITGQNGAGKTTLARCL 308
>UniRef50_A4A3A3 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 742
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 87 EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
E D R+ + L LI+G G GKTT+++CL I P
Sbjct: 350 EQKDAVRMAATNKLCLIIGGAGTGKTTVLKCLYQVINASEP 390
>UniRef50_A1K1W2 Cluster: Exonuclease SbcC, putative; n=1; Azoarcus
sp. BH72|Rep: Exonuclease SbcC, putative - Azoarcus sp.
(strain BH72)
Length = 1023
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 69 IRSFGPEDTDEQ---RILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+++FGP E+ +L + L LI G G GKT+I++ + YA+ G G R+
Sbjct: 8 LQAFGPFAGREEIDFTLLPEGALFLISGPTGAGKTSILDGITYALYGDTSGGERS 62
>UniRef50_A0JVY1 Cluster: ABC transporter related precursor; n=1;
Arthrobacter sp. FB24|Rep: ABC transporter related
precursor - Arthrobacter sp. (strain FB24)
Length = 516
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 135 ILGQNGCGKTTIIECL 182
+LGQNGCGK+T+I+CL
Sbjct: 41 LLGQNGCGKSTLIKCL 56
>UniRef50_Q9P139 Cluster: PRO2958; n=1; Homo sapiens|Rep: PRO2958 -
Homo sapiens (Human)
Length = 58
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -2
Query: 220 LLPGGI*PVIAYLKHSIIVVLPHPFCPNISVNGESNSMRCSSVSSGPKLLIPLI 59
LLP + P + Y HS+ V HPFC IS S K+L+PLI
Sbjct: 4 LLPVSVYPYM-YFIHSVNVFTNHPFCRQISYRESVEERYSVSRGKSCKILVPLI 56
>UniRef50_Q8SQJ6 Cluster: CHROMOSOME SEGREGATION PROTEIN OF THE SMC
FAMILY; n=1; Encephalitozoon cuniculi|Rep: CHROMOSOME
SEGREGATION PROTEIN OF THE SMC FAMILY - Encephalitozoon
cuniculi
Length = 1017
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/78 (21%), Positives = 38/78 (48%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+K + ++ RSF DE + +I+G+NG GK++I+ + + + G+
Sbjct: 3 IKQIRLKNFRSF----RDEVVVPLSEHTNIIVGRNGSGKSSIVSAVHFVLCGEKHSCESR 58
Query: 225 ECFVHDAKVNDQQKYSVK 278
+H+ +++ SV+
Sbjct: 59 TGLIHEGSRAMEEEGSVE 76
>UniRef50_O06714 Cluster: Nuclease sbcCD subunit C; n=3;
Bacillus|Rep: Nuclease sbcCD subunit C - Bacillus
subtilis
Length = 1130
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+L+I+G+ SF E T + L + + I G G GK++I++ + A+ G++ + N
Sbjct: 5 ALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAANN 62
>UniRef50_Q4H4D7 Cluster: ATP-binding cassette (ABC) transporter
ABCA14; n=14; Eutheria|Rep: ATP-binding cassette (ABC)
transporter ABCA14 - Mus musculus (Mouse)
Length = 1733
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVN 254
L+ +T++LG NG GKTT+ L TG + P S+ ++H +++
Sbjct: 545 LYKGQVTVLLGHNGAGKTTVCSVL----TGLITP-SKGHAYIHGCEIS 587
>UniRef50_Q8YFT1 Cluster: CHROMOSOME SEGREGATION PROTEIN SMC2; n=29;
Alphaproteobacteria|Rep: CHROMOSOME SEGREGATION PROTEIN
SMC2 - Brucella melitensis
Length = 1154
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
L + G +SF + + + LT ++G NGCGK+ ++E LR+ +
Sbjct: 8 LRLVGFKSF----VEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVM 50
>UniRef50_Q89PU7 Cluster: ABC transporter permease protein; n=4;
Alphaproteobacteria|Rep: ABC transporter permease
protein - Bradyrhizobium japonicum
Length = 260
Score = 33.9 bits (74), Expect = 4.3
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 51 SLAIRGI-RSFGPED--TDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
+L +RG+ R FG TD + +LG NG GKTT+ C ITG PP S
Sbjct: 16 ALELRGVTRLFGALAALTDVTITVRPGERRAVLGSNGAGKTTLFNC----ITGDFPPSS 70
>UniRef50_Q89P52 Cluster: ABC transporter ATP-binding protein; n=1;
Bradyrhizobium japonicum|Rep: ABC transporter
ATP-binding protein - Bradyrhizobium japonicum
Length = 364
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVND 257
+ +LG +GCGKTT CLR I G + P S + FV+D K+ D
Sbjct: 33 MVALLGPSGCGKTT---CLR-MIAGLIRPTS-GDVFVNDKKMTD 71
>UniRef50_Q81ZL2 Cluster: SMC protein; n=4; Coxiella burnetii|Rep:
SMC protein - Coxiella burnetii
Length = 1169
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K++ + G +SF D I + I+G NGCGK+ +++ +R+ I
Sbjct: 3 LKTIKLAGFKSF----VDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVI 48
>UniRef50_Q5SIS6 Cluster: Exonuclease SbcC; n=2; Thermus
thermophilus|Rep: Exonuclease SbcC - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 966
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 69 IRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMP 209
+ FGP + D L I G G GK+T+++ + +A+ GQ+P
Sbjct: 8 LEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVP 54
>UniRef50_Q5F6V2 Cluster: Putative uncharacterized protein; n=4;
Neisseria|Rep: Putative uncharacterized protein -
Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Length = 1161
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ + G +SF TD I L ++G NGCGK+ +I+ +R+ +
Sbjct: 6 IKLSGFKSF----TDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVL 48
>UniRef50_Q3A800 Cluster: ABC-type transport system, ATPase
component; n=3; Bacteria|Rep: ABC-type transport system,
ATPase component - Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1)
Length = 235
Score = 33.9 bits (74), Expect = 4.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECL 182
E + F+ + ++ G +GCGKTT++ CL
Sbjct: 18 EAELAFEQGILVLFGPSGCGKTTLLNCL 45
>UniRef50_Q2YBB9 Cluster: Chromosome segregation protein SMC; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Chromosome
segregation protein SMC - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 1190
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
+ + G +SF D I F L ++G NGCGK+ +I+ +R+ + R E
Sbjct: 6 IKLAGFKSF----VDPTEIPFPGDLVGVVGPNGCGKSNVIDAVRWVLGESRASALRGE 59
>UniRef50_Q2IEJ2 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 896
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKV 251
D + I F+ L +++G G GK+T+IE LR+ + + P ++ HD V
Sbjct: 289 DGRAICFNENLNVLIGGRGTGKSTVIESLRHVL--DLEPLGQDAKVAHDGIV 338
>UniRef50_O51074 Cluster: P115 protein; n=3; Borrelia burgdorferi
group|Rep: P115 protein - Borrelia burgdorferi (Lyme
disease spirochete)
Length = 819
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+K + + G +SF + Q L+ I+G NGCGK+ +I+ +R+ +
Sbjct: 7 LKKIVLLGFKSF----LNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCM 52
>UniRef50_Q1QGW5 Cluster: Putative uncharacterized protein; n=1;
Nitrobacter hamburgensis X14|Rep: Putative
uncharacterized protein - Nitrobacter hamburgensis
(strain X14 / DSM 10229)
Length = 604
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 120 SPLTLILGQNGCGKTTIIECL 182
SP T+++G N CGKTT++E L
Sbjct: 22 SPHTVLVGSNNCGKTTVVEAL 42
>UniRef50_Q0S485 Cluster: ATP-dependent dsDNA exonuclease SbcC; n=1;
Rhodococcus sp. RHA1|Rep: ATP-dependent dsDNA
exonuclease SbcC - Rhodococcus sp. (strain RHA1)
Length = 993
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 69 IRSFGP----EDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 227
+ +FGP + D R+ D L L+ G G GKTTI++ + +A+ G + PG+R +
Sbjct: 8 VEAFGPFAGSVEVDFDRLGADG-LFLLHGHTGAGKTTILDAVAFALYGTV-PGARKD 62
>UniRef50_Q0RZ01 Cluster: Monosaccharide-transporting ATPase; n=1;
Rhodococcus sp. RHA1|Rep: Monosaccharide-transporting
ATPase - Rhodococcus sp. (strain RHA1)
Length = 503
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 93 TDEQRILFDSPLTLILGQNGCGKTTIIECL 182
TD +L + ++G+NGCGK+T I+CL
Sbjct: 20 TDFDLVLEPGEIHALVGENGCGKSTFIKCL 49
>UniRef50_Q025B4 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 374
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 114 FDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
F L ++ G+NG GKTT+++ L Y I+G +
Sbjct: 20 FHPDLNVVTGKNGSGKTTLLKLLWYVISGNL 50
>UniRef50_A7HCA0 Cluster: DNA repair exonuclease, SbcC; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: DNA repair
exonuclease, SbcC - Anaeromyxobacter sp. Fw109-5
Length = 1006
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 69 IRSFGPEDTDEQRILFDS----PLTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+++FGP Q++ FD+ L LI G G GKTT+ + + +A+ G + PG+R
Sbjct: 8 LQAFGPY-ARAQKVDFDALGGADLFLIHGPTGAGKTTLFDAMTFALYGDV-PGTR 60
>UniRef50_A1GBL7 Cluster: ABC transporter related; n=1; Salinispora
arenicola CNS205|Rep: ABC transporter related -
Salinispora arenicola CNS205
Length = 350
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
LT +LG +GCGKTT++ CL
Sbjct: 31 LTAVLGPSGCGKTTLLRCL 49
>UniRef50_A0LTA1 Cluster: ABC transporter related precursor; n=1;
Acidothermus cellulolyticus 11B|Rep: ABC transporter
related precursor - Acidothermus cellulolyticus (strain
ATCC 43068 / 11B)
Length = 284
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 135 ILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVND 257
I+G +GCGKTT++ C + G M P + ++HD +V +
Sbjct: 37 IVGPSGCGKTTLLRC----VVGLMAP-TDGAVYIHDRRVTE 72
>UniRef50_A0L7C6 Cluster: Putative uncharacterized protein; n=3;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 633
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
L ++G G GKTTI+E +RY + G MP RN
Sbjct: 37 LNCVIGGRGTGKTTILEFIRYTL-GLMPELQRN 68
>UniRef50_Q7YYW8 Cluster: Restin, possible; n=3;
Cryptosporidium|Rep: Restin, possible - Cryptosporidium
parvum
Length = 457
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 550 KVKERFDEIFDA-DKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKKPDLDQEKLNVVN 726
+VK+ F EI D Y + RL +DY LKL+E ++A L+ + ++E V
Sbjct: 79 EVKKNFKEIKDLISDYMNETSRLSSKEEDYKSQLKLIEDDIAELSSRLITNEEELKEKVG 138
Query: 727 SRV 735
++
Sbjct: 139 MKI 141
>UniRef50_Q54UZ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 589
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 63 RGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
R + F D D QR F ++LG G GKTT+IE ITGQ+
Sbjct: 350 RNLVLFSSFDDDHQRFNF-----ILLGMTGVGKTTMIELFLNIITGQI 392
>UniRef50_A2FD36 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 3977
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
H +D ++E K K +Y LD+LK + K+ +N L Q+ + L ++
Sbjct: 2322 HDKDHQQIIEEMNKEKSELGS--QIHEYESELDKLKSLNKELNENNTKLNQDKSELIKQN 2379
Query: 691 PDLDQEKLNVVNSR 732
DL + +++N++
Sbjct: 2380 EDLTRNNNDLINAQ 2393
>UniRef50_A3CVZ6 Cluster: SMC domain protein; n=1; Methanoculleus
marisnigri JR1|Rep: SMC domain protein - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 1057
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
+Q I+F +T I+G NG GK++I+ + +A+ G G
Sbjct: 16 DQEIVFQDGITGIVGNNGTGKSSIVSAVLFALYGLQGTG 54
>UniRef50_Q99758 Cluster: ATP-binding cassette sub-family A member
3; n=17; Euteleostomi|Rep: ATP-binding cassette
sub-family A member 3 - Homo sapiens (Human)
Length = 1704
Score = 33.9 bits (74), Expect = 4.3
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDT----DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQ 203
+AG+K + + G +D D L++ +T++LG NG GKTT + L TG
Sbjct: 527 VAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSML----TGL 582
Query: 204 MPPGS 218
PP S
Sbjct: 583 FPPTS 587
>UniRef50_UPI0000D573D3 Cluster: PREDICTED: similar to CG1718-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG1718-PA - Tribolium castaneum
Length = 1743
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 LFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFV-HDAKVN 254
+++ +T++LG NG GKTT + L TG PP S HD K +
Sbjct: 597 MYNDQITVLLGHNGAGKTTTMSML----TGMFPPTSGTAVVCGHDIKTD 641
>UniRef50_Q9RP51 Cluster: Structural maintenance of chromosomes
protein homolog Smc; n=2; Caulobacter|Rep: Structural
maintenance of chromosomes protein homolog Smc -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 1147
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 54 LAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
L + G +SF + E RI + LT I+G NGCGK+ ++E LR+ +
Sbjct: 6 LRLSGFKSF--VEPTEFRI--EPGLTGIVGPNGCGKSNLLEALRWVM 48
>UniRef50_Q9PAG0 Cluster: Chromosome segregation protein; n=12;
Xanthomonadaceae|Rep: Chromosome segregation protein -
Xylella fastidiosa
Length = 1167
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAI 194
+ ++ + G +SF D + + +T I+G NGCGK+ II+ +R+ +
Sbjct: 3 LSTIKLSGFKSF----VDPATLHLPTNMTCIVGPNGCGKSNIIDAVRWVM 48
>UniRef50_Q82J52 Cluster: Putative uncharacterized protein; n=3;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 675
Score = 33.5 bits (73), Expect = 5.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECLRYAITG 200
+ P+ LI G NGCGKTT+++ ++ + G
Sbjct: 27 NKPIILIGGLNGCGKTTLLDAIQLVLYG 54
>UniRef50_Q39IV9 Cluster: ABC branched-chain amino acid family
transporter, ATPase subunit; n=116; Bacteria|Rep: ABC
branched-chain amino acid family transporter, ATPase
subunit - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 235
Score = 33.5 bits (73), Expect = 5.7
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECL 182
D LT++LG+NG GK+T++ CL
Sbjct: 31 DGKLTVLLGRNGVGKSTLLRCL 52
>UniRef50_Q2IEM8 Cluster: OLD family-like ATP-dependent
endonuclease; n=1; Anaeromyxobacter dehalogenans
2CP-C|Rep: OLD family-like ATP-dependent endonuclease -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 758
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 51 SLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+L I R FG I F + + +ILG+N GKT I++ LR + + PG R+
Sbjct: 100 TLRIENFRCFGSSGIT---IEFQAGMNVILGENNVGKTAIVDALRLLFS--LGPGRRD 152
>UniRef50_Q3VLI0 Cluster: Conserved hypothetical ATP-binding
protein; n=2; Chlorobium/Pelodictyon group|Rep:
Conserved hypothetical ATP-binding protein - Pelodictyon
phaeoclathratiforme BU-1
Length = 423
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECLRYA---ITGQMPPGSRNECFVHDAKVNDQQK 266
+E + FD+ LT+I NG GKTT+++ L +T + S ++ D ++ + K
Sbjct: 16 EELCLPFDAGLTVIAAVNGGGKTTVVDALAMLLSWLTARTKRDSGKGRYIKDVEIKNGAK 75
Query: 267 YSV 275
+S+
Sbjct: 76 FSL 78
>UniRef50_Q1WSF5 Cluster: Exonuclease; n=1; Lactobacillus salivarius
subsp. salivarius UCC118|Rep: Exonuclease -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 1033
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRIL-FDS-PLTLILGQNGCGKTTIIECLRYAI 194
+K L +R ++ FGP + FD+ PL LI G+ G GKTTI + + +A+
Sbjct: 1 MKPLKLR-MKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFAL 51
>UniRef50_Q15HV3 Cluster: TcpA; n=3; Clostridium perfringens|Rep:
TcpA - Clostridium perfringens
Length = 532
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 66 GIRSFGPEDTDEQRI-LFDSPLTLILGQNGCGKTTIIECLRYAI 194
G+ +FG + E +I L + P L+ GQ G GK+ ++ CL + +
Sbjct: 209 GVLNFGKSISSEIKIDLDEQPHVLVAGQTGSGKSVLMRCLLWQV 252
>UniRef50_Q0LQS6 Cluster: ATPase; n=1; Herpetosiphon aurantiacus
ATCC 23779|Rep: ATPase - Herpetosiphon aurantiacus ATCC
23779
Length = 269
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 114 FDSPLTLILGQNGCGKTTIIECLRYA 191
F++P+T+I+G NG GK+T +E L A
Sbjct: 36 FEAPVTIIVGDNGSGKSTFLEGLAVA 61
>UniRef50_Q0K4S7 Cluster: DNA repair exonuclease, SbcC; n=3;
Cupriavidus|Rep: DNA repair exonuclease, SbcC -
Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 /
Stanier 337)(Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier337))
Length = 1020
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 69 IRSFGPEDTDEQ---RILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
+++FGP EQ L + LI G G GKTT+++ + +A+ G G R+
Sbjct: 8 LQAFGPFAATEQVDFTRLGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSGGERS 62
>UniRef50_A6WB39 Cluster: SMC domain protein; n=1; Kineococcus
radiotolerans SRS30216|Rep: SMC domain protein -
Kineococcus radiotolerans SRS30216
Length = 829
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M ++S+ + +RS G + L D +T + G G GK+T++ L YA+ G P G
Sbjct: 1 MITIESVELVNVRSIGRAVVEP---LVDGGVTALNGPRGVGKSTVLIGLLYALFGTTPDG 57
>UniRef50_A6Q5M3 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 684
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 45 VKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQM 206
+K+L + R F + + LI G+NG GKTT++E + + G +
Sbjct: 3 LKTLVLEDFRQFKDRQILNLTTTNEKNIVLIHGENGAGKTTLLEAFSWCLYGDL 56
>UniRef50_A6LTW3 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 663
Score = 33.5 bits (73), Expect = 5.7
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 478 FKSHTKFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLL 657
F KFC CH+E S +++ +K+ + FD K + L+ + K K+ + +K L
Sbjct: 358 FDEDEKFCPTCHREYESEQIED---IKDNAERYFDEIK-TKKLNSINKQGKELGEKIKEL 413
Query: 658 EQ-------EVAHLTEKKPDLDQEKLNV 720
E ++A+ TEK LD+ LN+
Sbjct: 414 EALTEDNNLKIANYTEK---LDEYSLNI 438
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,466,773
Number of Sequences: 1657284
Number of extensions: 15053670
Number of successful extensions: 55503
Number of sequences better than 10.0: 339
Number of HSP's better than 10.0 without gapping: 52284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55438
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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