Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40059
         (844 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17263 Cluster: Elongation factor 1 alpha; n=4; Fungi/M...    44   0.004
UniRef50_UPI00005A4635 Cluster: PREDICTED: similar to statin-lik...    43   0.008
UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porph...    43   0.011
UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397; ro...    43   0.011
UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224; cell...    41   0.045
UniRef50_Q96TP0 Cluster: Elongation factor 1 alpha; n=5; Fungi/M...    40   0.078
UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;...    38   0.24 
UniRef50_A2AX44 Cluster: Translation elongation factor 1 like; n...    36   0.96 
UniRef50_UPI0000D55B6A Cluster: PREDICTED: similar to CG1898-PA;...    36   1.3  
UniRef50_Q00WU5 Cluster: EF-1 alpha-like protein; n=1; Ostreococ...    34   3.9  
UniRef50_Q1DRM7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q95UT7 Cluster: Elongation factor 1 alpha short form; n...    34   5.1  
UniRef50_Q8EUL0 Cluster: Putative uncharacterized protein MYPE91...    33   6.8  
UniRef50_Q5UHI3 Cluster: EF-1 alpha-like protein; n=6; Eukaryota...    33   6.8  
UniRef50_O96622 Cluster: P41-Arc; n=2; Dictyostelium discoideum|...    33   9.0  

>UniRef50_Q17263 Cluster: Elongation factor 1 alpha; n=4;
           Fungi/Metazoa group|Rep: Elongation factor 1 alpha -
           Brugia pahangi (Filarial nematode worm)
          Length = 123

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 21/37 (56%), Positives = 25/37 (67%)
 Frame = +3

Query: 711 HKWGQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           H  G+EKTH+ IVVIGH   G+STTTG  +    GGI
Sbjct: 21  HIMGKEKTHINIVVIGHVDSGKSTTTGHLIY-KCGGI 56


>UniRef50_UPI00005A4635 Cluster: PREDICTED: similar to statin-like;
           n=2; Canis lupus familiaris|Rep: PREDICTED: similar to
           statin-like - Canis familiaris
          Length = 667

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 690 EPCHSTNHKWGQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           +P  +     G+EKTH+ IVVIGH   G+STTTG  +    GGI
Sbjct: 272 QPLPTPPGSMGKEKTHINIVVIGHVDSGKSTTTGHLIY-KCGGI 314


>UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porphyra
           purpurea|Rep: Elongation factor 1-alpha S - Porphyra
           purpurea
          Length = 515

 Score = 42.7 bits (96), Expect = 0.011
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +3

Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           G+EKTH+ +VVIGH   G+STTTG  +   +GGI
Sbjct: 2   GKEKTHINLVVIGHVDAGKSTTTGHLIY-KLGGI 34


>UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397;
           root|Rep: Elongation factor 1-alpha 2 - Homo sapiens
           (Human)
          Length = 463

 Score = 42.7 bits (96), Expect = 0.011
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +3

Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           G+EKTH+ IVVIGH   G+STTTG  +    GGI
Sbjct: 2   GKEKTHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34


>UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224;
           cellular organisms|Rep: Elongation factor 1-alpha -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 449

 Score = 40.7 bits (91), Expect = 0.045
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +3

Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           G+EK H+ IVVIGH   G+STTTG  +   +GGI
Sbjct: 2   GKEKFHINIVVIGHVDSGKSTTTGHLIY-KLGGI 34


>UniRef50_Q96TP0 Cluster: Elongation factor 1 alpha; n=5;
           Fungi/Metazoa group|Rep: Elongation factor 1 alpha -
           Gibberella intermedia (Bulb rot disease fungus)
           (Fusariumproliferatum)
          Length = 108

 Score = 39.9 bits (89), Expect = 0.078
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +3

Query: 723 QEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           ++KTHL +VVIGH   G+STTTG  +    GGI
Sbjct: 4   EDKTHLNVVVIGHVDSGKSTTTGHLIY-QCGGI 35


>UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;
           n=6; Fungi/Metazoa group|Rep: Elongation factor
           1-alpha-like protein - Magnaporthe grisea (Rice blast
           fungus) (Pyricularia grisea)
          Length = 473

 Score = 38.3 bits (85), Expect = 0.24
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 723 QEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGIGQ 827
           +EK+HL +VVIGH   G+STTTG  +   + GI Q
Sbjct: 4   KEKSHLNVVVIGHVDSGKSTTTGHLIY-KLKGIDQ 37


>UniRef50_A2AX44 Cluster: Translation elongation factor 1 like;
           n=37; Eukaryota|Rep: Translation elongation factor 1
           like - Guillardia theta (Cryptomonas phi)
          Length = 472

 Score = 36.3 bits (80), Expect = 0.96
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +3

Query: 726 EKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           EK HL IV+ GH   G+STTTG  +L  +GGI
Sbjct: 3   EKEHLSIVICGHVDSGKSTTTGR-LLFELGGI 33


>UniRef50_UPI0000D55B6A Cluster: PREDICTED: similar to CG1898-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG1898-PA - Tribolium castaneum
          Length = 792

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGIGQ 827
           G  K HLY+VVIGH   G+ST  G  +L ++G + Q
Sbjct: 363 GDSKEHLYMVVIGHVDAGKSTLMG-HLLYDLGQVNQ 397


>UniRef50_Q00WU5 Cluster: EF-1 alpha-like protein; n=1; Ostreococcus
           tauri|Rep: EF-1 alpha-like protein - Ostreococcus tauri
          Length = 444

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +3

Query: 729 KTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           K HL IV+ GH   G+STTTG  +L  +GGI
Sbjct: 12  KEHLSIVICGHVDSGKSTTTGR-LLFELGGI 41


>UniRef50_Q1DRM7 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 531

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 722 PGKDSPLHCRHRARDSRQVHHHWVICPTKCGGD 820
           P +D+    R+R  DS + HH  V CPT  GGD
Sbjct: 16  PEEDTQRIVRNRGPDSYRAHHACVSCPTPSGGD 48


>UniRef50_Q95UT7 Cluster: Elongation factor 1 alpha short form; n=1;
           Monosiga brevicollis|Rep: Elongation factor 1 alpha
           short form - Monosiga brevicollis
          Length = 208

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 729 KTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
           K H+ IV+ GH   G+STTTG  +   +GGI
Sbjct: 5   KQHVSIVICGHVDAGKSTTTGRLIF-ELGGI 34


>UniRef50_Q8EUL0 Cluster: Putative uncharacterized protein MYPE9110;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE9110 - Mycoplasma penetrans
          Length = 647

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -2

Query: 627 HAEHLQFFHYYLPYVHRIIEYIPILNVDESTRNYVFKN-IMTVCLHYTVYSIHYITHSST 451
           H EH    H+YL   ++I +++  L +  +  ++VF N        Y + +++   +S  
Sbjct: 411 HLEHAHSSHFYLKPSNKIFQHLE-LAIKHNNNSFVFLNPKKKYSFAYDLINLNLSKYSKN 469

Query: 450 *H*EIYNINVHKTSLLSNN 394
               IY +NVH   L++ N
Sbjct: 470 TQNFIYGMNVHVPELININ 488


>UniRef50_Q5UHI3 Cluster: EF-1 alpha-like protein; n=6;
           Eukaryota|Rep: EF-1 alpha-like protein - Bigelowiella
           natans (Pedinomonas minutissima) (Chlorarachnion
           sp.(strain CCMP 621))
          Length = 513

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 726 EKTHLYIVVIGHATPGRSTTTG 791
           +K HL +V++GH   G+STTTG
Sbjct: 18  DKPHLGVVIVGHVDAGKSTTTG 39


>UniRef50_O96622 Cluster: P41-Arc; n=2; Dictyostelium
           discoideum|Rep: P41-Arc - Dictyostelium discoideum
           (Slime mold)
          Length = 369

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 592 ALCPQNHRIHPYSERGRKYA*LRLQKHHDRLLT 494
           ALCP N+ +H Y+++G  +    +   HD+L+T
Sbjct: 26  ALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVT 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,847,571
Number of Sequences: 1657284
Number of extensions: 15927522
Number of successful extensions: 37743
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 36068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37717
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)