Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20177
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MSF5 Cluster: GM16138p; n=12; Arthropoda|Rep: GM16138...    81   2e-14
UniRef50_A3EXS3 Cluster: Putative ribonuclease; n=1; Maconellico...    70   5e-11
UniRef50_A7RHU7 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ...    61   3e-08
UniRef50_Q20589 Cluster: Putative uncharacterized protein; n=2; ...    57   4e-07
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    56   1e-06
UniRef50_Q28WM7 Cluster: GA10879-PA; n=1; Drosophila pseudoobscu...    55   2e-06
UniRef50_Q9NDV2 Cluster: Ribonuclease precursor; n=1; Ceratitis ...    51   4e-05
UniRef50_Q9W286 Cluster: CG11269-PA; n=1; Drosophila melanogaste...    47   4e-04
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2...    39   0.15 
UniRef50_O02142 Cluster: Putative uncharacterized protein; n=2; ...    37   0.62 

>UniRef50_Q8MSF5 Cluster: GM16138p; n=12; Arthropoda|Rep: GM16138p -
           Drosophila melanogaster (Fruit fly)
          Length = 95

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 32/45 (71%), Positives = 42/45 (93%)
 Frame = +1

Query: 118 KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK 252
           K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+
Sbjct: 2   KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEE 46



 Score = 59.3 bits (137), Expect = 1e-07
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = +3

Query: 249 EKPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQFWLNNR 392
           E+  HS+EDF     + Y  NA NCWIAA +Y++TL++S  QF++N+R
Sbjct: 44  EEEYHSLEDFYAAANRAYNQNAYNCWIAACIYVLTLLLSAQQFYMNSR 91


>UniRef50_A3EXS3 Cluster: Putative ribonuclease; n=1;
           Maconellicoccus hirsutus|Rep: Putative ribonuclease -
           Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 72

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = +3

Query: 249 EKPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQFWLNNRSSVSM 407
           E+P  S E F      GY  NA NCWIAA LY+ITL+VSGHQF+LN+R+S+SM
Sbjct: 20  EEPFESHEKFYSVANTGYDQNAYNCWIAACLYVITLLVSGHQFYLNSRNSISM 72


>UniRef50_A7RHU7 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 88

 Score = 61.3 bits (142), Expect = 3e-08
 Identities = 23/44 (52%), Positives = 36/44 (81%)
 Frame = +1

Query: 118 KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDE 249
           ++CGPKLS C  +LS+WG+I L L+GVF+  +++AL+ED+P D+
Sbjct: 3   RICGPKLSNCCFILSLWGVIMLLLLGVFFKTKSIALVEDIPKDK 46



 Score = 41.5 bits (93), Expect = 0.022
 Identities = 16/35 (45%), Positives = 27/35 (77%)
 Frame = +3

Query: 291 EKGYTLNAQNCWIAALLYLITLVVSGHQFWLNNRS 395
           + G++  A+NC+IAA +Y +TL++S HQ W+N R+
Sbjct: 48  DAGFSSTAKNCFIAAGIYGVTLIISIHQKWVNART 82


>UniRef50_Q20589 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 95

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +1

Query: 115 CKLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFD 246
           C L GPK+S   +V+SVWG+I L L+GVF+YI+AV L  DL F+
Sbjct: 5   CPLMGPKMSAFCMVMSVWGVIFLGLLGVFFYIQAVTLFPDLHFE 48


>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = -3

Query: 710 KWADDLWQYAGKNWMRKVEDRSMWRTMGEVYIQQWRDTG 594
           +W DDL + AG  WM+  +DRS+W+++GE ++QQW   G
Sbjct: 459 RWTDDLVKVAGSTWMQAAQDRSLWKSLGEAFVQQWTSFG 497


>UniRef50_Q28WM7 Cluster: GA10879-PA; n=1; Drosophila
           pseudoobscura|Rep: GA10879-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 94

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = +1

Query: 121 LCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLP 240
           +CGPK S   L +S W +IQLTLMG+F+ + ++AL++DLP
Sbjct: 2   VCGPKCSFFCLFISAWAVIQLTLMGIFFLLNSMALIDDLP 41


>UniRef50_Q9NDV2 Cluster: Ribonuclease precursor; n=1; Ceratitis
           capitata|Rep: Ribonuclease precursor - Ceratitis
           capitata (Mediterranean fruit fly)
          Length = 138

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 23/32 (71%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
 Frame = +1

Query: 160 SVWGIIQLTLM-GVFYYIRAVALLEDLPFDEK 252
           SVWGIIQL LM G+F+YI +VAL+EDLP DE+
Sbjct: 73  SVWGIIQLVLMMGLFFYINSVALIEDLPIDEE 104


>UniRef50_Q9W286 Cluster: CG11269-PA; n=1; Drosophila
           melanogaster|Rep: CG11269-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 107

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +1

Query: 124 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLP 240
           CG K  L  L +S WG + L L+G+F+Y++++ LLE LP
Sbjct: 3   CGRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLP 41


>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
           F28E10.3 [imported] - Caenorhabditis elegans; n=4;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           protein F28E10.3 [imported] - Caenorhabditis elegans -
           Strongylocentrotus purpuratus
          Length = 824

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 710 KWADDLWQYAGK-NWMRKVEDRSMWRTMGEVYIQQWRDTG 594
           +W D+L Q+ G+ NW ++  +R +W    E +I QW D G
Sbjct: 398 RWRDELQQFWGQTNWHQQALNRGIWNHHAEAFILQWIDNG 437


>UniRef50_O02142 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 93

 Score = 36.7 bits (81), Expect = 0.62
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 127 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK 252
           GP  +   L L++WG + + ++G  +Y ++V L EDLP + K
Sbjct: 3   GPMCTGIFLFLALWGTVFMAILGGLFYNQSVGLFEDLPKESK 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,852,365
Number of Sequences: 1657284
Number of extensions: 14975516
Number of successful extensions: 32032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32006
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)