Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20141
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PEK7 Cluster: Putative uncharacterized protein; n=1; ...    36   1.0  
UniRef50_Q68DE3 Cluster: Basic helix-loop-helix domain-containin...    35   2.4  
UniRef50_A1D8H5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_UPI00015B581F Cluster: PREDICTED: similar to ENSANGP000...    34   4.2  
UniRef50_Q238W8 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_A5K1C6 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q7S9L2 Cluster: Protein stu-1; n=1; Neurospora crassa|R...    34   4.2  
UniRef50_Q7NJV1 Cluster: Apolipoprotein N-acyltransferase; n=1; ...    34   4.2  
UniRef50_Q247S2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_A6SP60 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q1GZH7 Cluster: DNA internalization-related competence ...    33   9.7  
UniRef50_A6DD60 Cluster: DNA polymerase III subunits gamma and t...    33   9.7  
UniRef50_Q9U2D7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_A6RPS9 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  

>UniRef50_Q4PEK7 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 847

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +2

Query: 368 RSKSQTPSHKGSESVQRQLRSH*RQIRVDIGTGGLHKTVLSNHCALRDPKPKIKAEISKP 547
           +++SQ PS    +S+     +H R+     G G +HK + S       P P + + IS+P
Sbjct: 676 KARSQDPSTLMDQSIAEGFGNHHREEGGARGVGRIHKKLRSATMPQNSPMP-VVSPISRP 734

Query: 548 YTATGKPPLLPRKH 589
            TA   PP LPR+H
Sbjct: 735 ETA---PP-LPREH 744


>UniRef50_Q68DE3 Cluster: Basic helix-loop-helix domain-containing
            protein KIAA2018; n=16; Amniota|Rep: Basic
            helix-loop-helix domain-containing protein KIAA2018 -
            Homo sapiens (Human)
          Length = 2242

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 290  QEKRNHNPSDQTEDFEAH-NHNGTDDTRSKSQTPSHKGSESVQRQLRSH 433
            Q+KRN     QT        H+GTD +RSK+  P H   + +Q+Q++ H
Sbjct: 1519 QKKRNLVQGTQTSQLSLQPKHHGTDQSRSKTGQP-HPHHQQMQQQMQQH 1566


>UniRef50_A1D8H5 Cluster: Putative uncharacterized protein; n=1;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 88

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 26/87 (29%), Positives = 38/87 (43%)
 Frame = +3

Query: 405 RVYNDNYEAIRGKLESTLAPGDYIKPYLATTAPYEIPSRRLRPKYRSLTRPQGNHRSFPE 584
           RV  D+Y ++R +  S++  G    P +     + IP    RP   +L RPQG   S P 
Sbjct: 11  RVVYDHYASVRAEARSSVQAGRIALPAIRCPGGHYIPGAFDRPPKPTLARPQG---STPA 67

Query: 585 NISIKQNLATPWRTTMTFGIMRPFPSF 665
            +      A PWR   +  +  PF  F
Sbjct: 68  RMP-----AEPWRRVWSQAL--PFQQF 87


>UniRef50_UPI00015B581F Cluster: PREDICTED: similar to
           ENSANGP00000012639; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000012639 - Nasonia
           vitripennis
          Length = 862

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 299 RNHNPSDQTEDFEAHNHNGTDDTRSKSQTPSHKGSES 409
           R  +  DQ E+ E  + N  DDT  + QT SHK S S
Sbjct: 153 RKVDSDDQNEEPEKTHDNHNDDTHEEEQTTSHKSSSS 189


>UniRef50_Q238W8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1274

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
 Frame = +2

Query: 293  EKRNHNPSDQTEDFEAHNHNGTDDTRSKSQTPSHKGSESVQRQLRSH*RQIRVDIGTGGL 472
            EK N+  +DQ    E  NH  TD   S +     +GS+ ++  L    + ++ D+     
Sbjct: 936  EKSNNIKTDQ----EISNHVKTDQEISNNVKTDQEGSKHIKTDLEGS-KHVKTDLENSKH 990

Query: 473  HKTVL--SNHCALRDPKP---KIKAEISKPYTATGKPPLLPRKHINKTKSGDSLENDYDI 637
              T L  SNH      K    KI  EI+K            RK  NKTK+    EN+ D 
Sbjct: 991  INTDLEVSNHTRSDQEKNNHIKINKEINKEMVKNDS-----RKS-NKTKTEYEYENENDS 1044

Query: 638  RYNEAF 655
              NE F
Sbjct: 1045 HVNEEF 1050


>UniRef50_A5K1C6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4108

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 311  PSDQTEDFEAHNHNGTDDTRSKSQTPSHKGSESVQRQLRSH*RQIRVDIGTGGLHKTVLS 490
            P   T D +  +H+  +D   +S++ S   ++  Q  L      +  D  TG +H   ++
Sbjct: 2310 PGGDTADGQIDHHSNAEDPLGESRSASSHINKPSQWPLLKD--SLSKDSVTGDVHPGGMT 2367

Query: 491  NHCALRDPKPKIKAEISKPYTATGKPPLLPRK-HINKTKSGDSLENDYDIRYNEA 652
              CA RDP P+ + + SK  T +    +   K +++   + D  ++ Y+  Y+ +
Sbjct: 2368 IECAERDP-PRREEDDSKKVTPSSDENVTDLKPNLSSASTLDMEDSSYESYYSSS 2421


>UniRef50_Q7S9L2 Cluster: Protein stu-1; n=1; Neurospora crassa|Rep:
           Protein stu-1 - Neurospora crassa
          Length = 1136

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = +3

Query: 477 KPYLATTAPYEIPSRRLRPKYRSLTRPQGNH--RSFPENISIK-QNLATPWRTTMTFGIM 647
           KP + T    +  +  + PK +++ RPQ  H   S    I I    +++P + T  FG+ 
Sbjct: 668 KPRIKTVTSPKTQTLVISPK-KAIPRPQQGHSTNSSESGIPIPVSGISSPTKPTSAFGLR 726

Query: 648 RPFPSFASKQIPSGFVVTPERDTLFPVQ 731
            P    A +  PS  + +P R    P Q
Sbjct: 727 SPRSPLAPELPPSSVIASPSRVMPDPAQ 754


>UniRef50_Q7NJV1 Cluster: Apolipoprotein N-acyltransferase; n=1;
           Gloeobacter violaceus|Rep: Apolipoprotein
           N-acyltransferase - Gloeobacter violaceus
          Length = 521

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 393 WLGV-WLFDLVSSVPLWLWASKSSVWSLGLW 304
           WLG+ W   L  ++  WL+ S S  W +GLW
Sbjct: 91  WLGIEWWPSLAIALGAWLFVSASQAWVIGLW 121


>UniRef50_Q247S2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1367

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 21/76 (27%), Positives = 31/76 (40%)
 Frame = +2

Query: 320 QTEDFEAHNHNGTDDTRSKSQTPSHKGSESVQRQLRSH*RQIRVDIGTGGLHKTVLSNHC 499
           Q   F  H HN  +D R  S TPSH       +Q ++H  QI+ ++ T      +L+ + 
Sbjct: 420 QQNQFFFHGHNNQNDGRVYSSTPSHSKQIQYMQQQQNH--QIQSNLTTSNSQSDLLTLNA 477

Query: 500 ALRDPKPKIKAEISKP 547
                 P      S P
Sbjct: 478 NQLQQIPNDDTNASSP 493


>UniRef50_A6SP60 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 320

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +3

Query: 450 STLAPGDYIKPYLATTAPYE--IPSRRLRPKYRSLTRPQGN-HRSFPENISIKQNLATPW 620
           STL P  Y+  +  T  PYE  I S  LR +   L +P    H  F E   ++Q+L  P+
Sbjct: 104 STLLPSQYLHSFAGTILPYELTIDSDALRKRLEWLMQPSNQCHTMFSE--QLRQSL-EPY 160

Query: 621 RTTMTF-GIMRPFPSFASKQIPS 686
            +  +F     PF  F S   P+
Sbjct: 161 DSKKSFYHFYAPFSLFLSATDPA 183


>UniRef50_Q1GZH7 Cluster: DNA internalization-related competence
           protein ComEC/Rec2; n=1; Methylobacillus flagellatus
           KT|Rep: DNA internalization-related competence protein
           ComEC/Rec2 - Methylobacillus flagellatus (strain KT /
           ATCC 51484 / DSM 6875)
          Length = 802

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 408 LSEPLWLGVWLFDLVSSVPLWLWASKSSVW 319
           L   LWL  WL  L  ++ LWL  S S++W
Sbjct: 445 LDSLLWLAHWLMQLAMALLLWLSESPSAIW 474


>UniRef50_A6DD60 Cluster: DNA polymerase III subunits gamma and tau;
           n=1; Caminibacter mediatlanticus TB-2|Rep: DNA
           polymerase III subunits gamma and tau - Caminibacter
           mediatlanticus TB-2
          Length = 487

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 426 EAIRGKLESTLAPGDYIKPYLATTAPYEIPSRRLR--PKYRSLTRPQGNHRSFPENISIK 599
           EA    L++   P +Y+K  +ATT P ++P+  L     +R    P+    SF + + IK
Sbjct: 131 EAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIPEKEIESFLQKVLIK 190

Query: 600 QNL 608
           +N+
Sbjct: 191 ENV 193


>UniRef50_Q9U2D7 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 1002

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 27/105 (25%), Positives = 43/105 (40%)
 Frame = +2

Query: 314 SDQTEDFEAHNHNGTDDTRSKSQTPSHKGSESVQRQLRSH*RQIRVDIGTGGLHKTVLSN 493
           SD+ +  E  + +  DD R   +TP      SV+RQ +   R+ R+        +     
Sbjct: 594 SDEVKKEEPESSD-EDDNRKDQRTPREDRRRSVERQDQREDRKERIKSPDDRAERRRSPE 652

Query: 494 HCALRDPKPKIKAEISKPYTATGKPPLLPRKHINKTKSGDSLEND 628
            C  R   P+ + E   P     K PL   +   + +  DSLEN+
Sbjct: 653 DCRDRLRSPEDRTERRSPSVERRKSPL---RRDERRRRHDSLENE 694


>UniRef50_A6RPS9 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 560

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
 Frame = +2

Query: 290 QEKRNHNPSDQTE-DFEAHNHNGTDD-TRSKSQTPSHKGSESVQRQLRSH*RQIRVDIGT 463
           Q KR H+ S+ +E  F A  H      + S+S +P H+       + RS  +  R D G 
Sbjct: 333 QRKRRHSESEDSERSFAARTHRQRRSYSSSRSPSPDHENRSKYNDRSRSPSKGRRQDYGA 392

Query: 464 GGLHKTVLSNHCALRDPKPKIKAEISKPYTATGKPPLLPRKH----INKTKSGDSLE-ND 628
            G ++    +H     P   I    + P   T     +P +H     N+T +   +    
Sbjct: 393 SGDNE---KSHSLSGSPNQSI-GNGNPPIPETYNMAAIPAQHGGFPSNQTYTNPPMPYQP 448

Query: 629 YDIRYNEAFP 658
           Y   +N+ FP
Sbjct: 449 YQQGFNQGFP 458


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,302,516
Number of Sequences: 1657284
Number of extensions: 13070611
Number of successful extensions: 37775
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37700
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)