Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20139
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7K1U0 Cluster: LD41905p; n=5; Sophophora|Rep: LD41905p...    42   0.013
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    41   0.038
UniRef50_UPI00003C0439 Cluster: PREDICTED: similar to CG12505-PA...    35   2.5  

>UniRef50_Q7K1U0 Cluster: LD41905p; n=5; Sophophora|Rep: LD41905p -
           Drosophila melanogaster (Fruit fly)
          Length = 254

 Score = 42.3 bits (95), Expect = 0.013
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 638 LRGLSMLLTHEAATWWQGVKTTMNKWDHALTSLRGAFGDSRP 513
           L+G+S+L    A+TWWQGV+     W  A+  +R  F  ++P
Sbjct: 83  LKGISLLFYGMASTWWQGVRKEATTWKEAIALIREHFSPTKP 124


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 40.7 bits (91), Expect = 0.038
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 187 MGNGNHSPTGGPYARLPTRAIRK 255
           MG+GNHSP+G PYA LPTRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_UPI00003C0439 Cluster: PREDICTED: similar to CG12505-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG12505-PA - Apis mellifera
          Length = 292

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 638 LRGLSMLLTHEAATWWQGVKTTMNKWDHALTSLRGAFGDSR 516
           L  L +L   EAA WW+ V   + KW  A+  L+ +F   R
Sbjct: 66  LHELPLLFEGEAAEWWEDVGGDVAKWSDAMAMLQDSFAPKR 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,539,191
Number of Sequences: 1657284
Number of extensions: 14994292
Number of successful extensions: 35764
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35750
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)