Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20091
(706 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49448 Cluster: Glutamate dehydrogenase 2, mitochondria... 71 2e-11
UniRef50_Q4T019 Cluster: Chromosome undetermined SCAF11390, whol... 71 4e-11
UniRef50_Q9VCN3 Cluster: CG4434-PA; n=3; Sophophora|Rep: CG4434-... 49 1e-04
UniRef50_Q2S0C1 Cluster: Glutamate dehydrogenase, short peptide;... 43 0.008
UniRef50_Q54KB7 Cluster: Glutamate dehydrogenase, NAD(P)+; n=1; ... 39 0.14
UniRef50_Q24BW7 Cluster: Glutamate/Leucine/Phenylalanine/Valine ... 38 0.32
UniRef50_Q23ZD8 Cluster: Glutamate/Leucine/Phenylalanine/Valine ... 38 0.32
UniRef50_Q94IH8 Cluster: Glutamate dhydrogenase; n=5; Viridiplan... 37 0.55
UniRef50_O96248 Cluster: Putative uncharacterized protein PFB077... 35 1.7
UniRef50_Q0W8B3 Cluster: Glutamate dehydrogenase; n=2; unculture... 35 2.2
UniRef50_Q73P03 Cluster: Glutamate dehydrogenase; n=3; Bacteria|... 34 3.9
UniRef50_A6DTG1 Cluster: Glutamate dehydrogenase/leucine dehydro... 34 3.9
UniRef50_Q9Y4B6 Cluster: Protein VPRBP; n=26; Fungi/Metazoa grou... 34 3.9
UniRef50_A0BLL2 Cluster: Chromosome undetermined scaffold_114, w... 33 6.8
>UniRef50_P49448 Cluster: Glutamate dehydrogenase 2, mitochondrial
precursor; n=91; Eumetazoa|Rep: Glutamate dehydrogenase
2, mitochondrial precursor - Homo sapiens (Human)
Length = 558
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Frame = +3
Query: 330 FFPPSLSSCRRKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMI 509
FF S KLV+DL+++ E+K+ +V GIL++++PC+H+L + FP+RRD G +E+I
Sbjct: 73 FFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVI 132
Query: 510 *AI-AHNIPHTGLQPKEVSILNGRNQR*S*GVSALMTFKCACVDV-LSAVLSRYQDHPKN 683
A + H + + +++LMT+KCA VDV + + +PKN
Sbjct: 133 EGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKN 192
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGG--FDSQRT*PEMKLRRISFDDLQVRVRGRAFGGAKP-VSRSSQE 682
GYRAQHS HRTP KGG + + + E+K S + V FGGAK V + +
Sbjct: 134 GYRAQHSQHRTPCKGGIRYSTDVSVDEVK-ALASLMTYKCAVVDVPFGGAKAGVKINPKN 192
Query: 683 YSEHELEK 706
Y+E+ELEK
Sbjct: 193 YTENELEK 200
>UniRef50_Q4T019 Cluster: Chromosome undetermined SCAF11390, whole
genome shotgun sequence; n=3; Euteleostomi|Rep:
Chromosome undetermined SCAF11390, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 618
Score = 70.5 bits (165), Expect = 4e-11
Identities = 27/60 (45%), Positives = 46/60 (76%)
Frame = +3
Query: 330 FFPPSLSSCRRKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMI 509
FF +S KLVEDLK+R E+K+ +V GIL++++PC+H+L + FP++RD+G++E++
Sbjct: 57 FFDRGVSIVEDKLVEDLKTRESPEQKRNRVRGILRIIKPCNHVLSVSFPIKRDNGEWEVV 116
Score = 35.9 bits (79), Expect = 0.97
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGG 559
GYRAQHS HRTP KGG
Sbjct: 118 GYRAQHSQHRTPCKGG 133
>UniRef50_Q9VCN3 Cluster: CG4434-PA; n=3; Sophophora|Rep: CG4434-PA
- Drosophila melanogaster (Fruit fly)
Length = 535
Score = 49.2 bits (112), Expect = 1e-04
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +1
Query: 256 SHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEESLLK 375
+H++P+KLK + T +P+F MV Y++H+A Q +E +LLK
Sbjct: 25 AHQVPEKLKKVETDKDPEFSEMVLYYYHKAAQTMEPALLK 64
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 EEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMI*AI-AHNIPHTGLQPKEVSILNG 575
EE++ +V IL L+ +E+ FP+ R +G YE+I +H++ H +
Sbjct: 75 EERQARVTAILNLLGSVSTSVEVNFPIVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALD 134
Query: 576 RNQR*S*GVSALMTFKCACVDV 641
N+ ++A+MTFKCACV+V
Sbjct: 135 VNESEVKALAAIMTFKCACVNV 156
>UniRef50_Q2S0C1 Cluster: Glutamate dehydrogenase, short peptide;
n=9; Bacteria|Rep: Glutamate dehydrogenase, short
peptide - Salinibacter ruber (strain DSM 13855)
Length = 553
Score = 42.7 bits (96), Expect = 0.008
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 423 GILKLMEPCDHILEIQFPLRRDSGDYEMI*AIAHNIPHTGLQPKE--VSILNGRNQR*S* 596
G+L + CD+I+ +FP+ RD G ++I H +QP + + N
Sbjct: 107 GVLHQIRACDNIIRFEFPIERDDGSIQVIRGYRGEHSH-HMQPTKGGIRYAPSVNVDEVM 165
Query: 597 GVSALMTFKCACVDV 641
+SALM++KCA VDV
Sbjct: 166 ALSALMSYKCAIVDV 180
>UniRef50_Q54KB7 Cluster: Glutamate dehydrogenase, NAD(P)+; n=1;
Dictyostelium discoideum AX4|Rep: Glutamate
dehydrogenase, NAD(P)+ - Dictyostelium discoideum AX4
Length = 502
Score = 38.7 bits (86), Expect = 0.14
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 423 GILKLMEPCDHILEIQFPLRRDSGDYEMI*AIAHNIPHTGLQPK-EVSILNGRNQR*S*G 599
G+L M+ C+ L ++FP++ + GD ++I H L K + + +
Sbjct: 59 GVLNNMKECNVALRVEFPIKNEHGDVDIIAGYRAQHSHHRLPCKGGIRFSEEVDLQEVMA 118
Query: 600 VSALMTFKCACVDV 641
+++LMT+KCA VDV
Sbjct: 119 LASLMTYKCAVVDV 132
Score = 35.1 bits (77), Expect = 1.7
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGGFD-SQRT*PEMKLRRISFDDLQVRVRGRAFGGAK-PVSRSSQEY 685
GYRAQHS HR P KGG S+ + + S + V FGGAK V ++Y
Sbjct: 89 GYRAQHSHHRLPCKGGIRFSEEVDLQEVMALASLMTYKCAVVDVPFGGAKGGVRIDPKKY 148
Query: 686 SEHELEK 706
+ + EK
Sbjct: 149 TVAQREK 155
>UniRef50_Q24BW7 Cluster: Glutamate/Leucine/Phenylalanine/Valine
dehydrogenase family protein; n=2;
Intramacronucleata|Rep:
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
family protein - Tetrahymena thermophila SB210
Length = 606
Score = 37.5 bits (83), Expect = 0.32
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 515 YRAQHSTHRTPTKGGFDSQRT*PEMKLRRIS-FDDLQVRVRGRAFGGAK-PVSRSSQEYS 688
YRAQH HR PTKGG + ++ +S L+ V +GGAK + + ++YS
Sbjct: 161 YRAQHKLHRLPTKGGTRYAKDINIQEVEALSCLMTLKCAVVNLPYGGAKGGIGFNPKQYS 220
Query: 689 EHELE 703
E+E
Sbjct: 221 AREIE 225
>UniRef50_Q23ZD8 Cluster: Glutamate/Leucine/Phenylalanine/Valine
dehydrogenase family protein; n=1; Tetrahymena
thermophila SB210|Rep:
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
family protein - Tetrahymena thermophila SB210
Length = 500
Score = 37.5 bits (83), Expect = 0.32
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 515 YRAQHSTHRTPTKGGF--DSQRT*PEMKLRRISFDDLQVRVRGRAFGGAK-PVSRSSQEY 685
YR QH TH PTKGGF + Q + +++ + + ++ +GGAK + + +EY
Sbjct: 86 YRVQHKTHCLPTKGGFIINDQVSREDIQSFAV-LNTVRSTTLDLPYGGAKGAICINPKEY 144
Query: 686 SEHELE 703
+E+ELE
Sbjct: 145 TENELE 150
>UniRef50_Q94IH8 Cluster: Glutamate dhydrogenase; n=5;
Viridiplantae|Rep: Glutamate dhydrogenase - Ulva pertusa
(Sea lettuce)
Length = 447
Score = 36.7 bits (81), Expect = 0.55
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 509 LGYRAQHSTHRTPTKGGFDSQRT*PEMKLRRI-SFDDLQVRVRGRAFGGAK-PVSRSSQE 682
+GYR QH R P KGG + +R + S + + FGGAK ++ ++
Sbjct: 86 MGYRVQHDNARGPFKGGLRFHKDADLDDVRSLASLMSFKTALLDVPFGGAKGGITVDTKA 145
Query: 683 YSEHELEK 706
SEHE+EK
Sbjct: 146 LSEHEIEK 153
>UniRef50_O96248 Cluster: Putative uncharacterized protein PFB0775w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0775w - Plasmodium falciparum
(isolate 3D7)
Length = 549
Score = 35.1 bits (77), Expect = 1.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 569 ENRNLLWLESCVWNVVRDSLNHFVIARIAPQRKLNLKNVIAWFHK 435
++ N++W C + ++ D LN I+ I+ R LK + W+ K
Sbjct: 158 KSTNIIWKRFCFYKLLSDKLNDLHISTISSYRHTYLKTIYIWYKK 202
>UniRef50_Q0W8B3 Cluster: Glutamate dehydrogenase; n=2; uncultured
methanogenic archaeon RC-I|Rep: Glutamate dehydrogenase
- Uncultured methanogenic archaeon RC-I
Length = 439
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGGFDSQRT*PEMKLRRIS-FDDLQVRVRGRAFGGAK-PVSRSSQEY 685
GYR+QH+ R P KGG E ++ +S L+ V G +GGAK + ++
Sbjct: 56 GYRSQHNNARGPVKGGIRVAPDVTENEVTALSMLMSLKCAVLGLPYGGAKGGIIADPKKL 115
Query: 686 SEHELEK 706
S+ E+E+
Sbjct: 116 SKAEMER 122
>UniRef50_Q73P03 Cluster: Glutamate dehydrogenase; n=3;
Bacteria|Rep: Glutamate dehydrogenase - Treponema
denticola
Length = 413
Score = 33.9 bits (74), Expect = 3.9
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGGFDSQRT*PEMKLRRIS-FDDLQVRVRGRAFGGAK-PVSRSSQEY 685
GYR QHST R P KGG + ++R +S + + V +GG K + +
Sbjct: 54 GYRVQHSTLRGPAKGGIRFHQDVNIDEVRSLSAWMTFKCAVADIPYGGGKGGICVNPSNL 113
Query: 686 SEHELEK 706
SE ELEK
Sbjct: 114 SETELEK 120
>UniRef50_A6DTG1 Cluster: Glutamate dehydrogenase/leucine
dehydrogenase; n=1; Lentisphaera araneosa HTCC2155|Rep:
Glutamate dehydrogenase/leucine dehydrogenase -
Lentisphaera araneosa HTCC2155
Length = 417
Score = 33.9 bits (74), Expect = 3.9
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +2
Query: 512 GYRAQHSTHRTPTKGGFDSQRT*PEMKLRRIS----FDDLQVRVRGRAFGGAK-PVSRSS 676
GYR QH+ P KGGF R P++ L + L+ + G FGGAK V +
Sbjct: 54 GYRIQHNNILGPYKGGF---RYHPQVNLDEVKGLAMLMTLKCSLAGLPFGGAKGGVKFNP 110
Query: 677 QEYSEHELEK 706
+++S E+EK
Sbjct: 111 KDFSISEIEK 120
>UniRef50_Q9Y4B6 Cluster: Protein VPRBP; n=26; Fungi/Metazoa
group|Rep: Protein VPRBP - Homo sapiens (Human)
Length = 1507
Score = 33.9 bits (74), Expect = 3.9
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -2
Query: 237 TFTPAGMIRNIVLRASF*TEFLS-GGTTDLAIFLRCSMVA-------YYVKYENRVRNRV 82
TF + +++L F TEF++ GG L R SM A YY+ Y RV
Sbjct: 371 TFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERV 430
Query: 81 ALHLLNF*NKLIIFVSFMLDCS 16
+H N + ++ + ++++CS
Sbjct: 431 CMHPHNVLSDVVNYTLWLMECS 452
>UniRef50_A0BLL2 Cluster: Chromosome undetermined scaffold_114,
whole genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 33.1 bits (72), Expect = 6.8
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 515 YRAQHSTHRTPTKGGFDSQRT*PEMKLRRIS-FDDLQVRVRGRAFGGAK-PVSRSSQEYS 688
+RAQH TH+ PTKGG ++ +S + V +GGAK + + ++YS
Sbjct: 82 FRAQHKTHKLPTKGGTRLSEHIHTEEVEALSLLMTFKNAVLELPYGGAKGGLKINPKKYS 141
Query: 689 EHELE 703
+ E+E
Sbjct: 142 KREIE 146
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,050,070
Number of Sequences: 1657284
Number of extensions: 14737097
Number of successful extensions: 33900
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33873
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -