Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20033
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p ... 100 3e-20
UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12... 83 8e-15
UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep: Zgc:5... 79 1e-13
UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4; n... 79 1e-13
UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RA... 62 1e-08
UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma j... 58 2e-07
UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole gen... 57 5e-07
UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep: F17... 52 1e-05
UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, wh... 52 1e-05
UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11; Liliopsida|... 51 2e-05
UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2; ... 51 2e-05
UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;... 50 4e-05
UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein RA... 49 9e-05
UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome a... 48 2e-04
UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome a... 42 0.011
UniRef50_Q5ATU0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q7MQL9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A6DKY0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p -
Drosophila melanogaster (Fruit fly)
Length = 64
Score = 100 bits (240), Expect = 3e-20
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQ
Sbjct: 1 MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQ 56
>UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12.5;
n=2; Bilateria|Rep: Putative uncharacterized protein
T09A12.5 - Caenorhabditis elegans
Length = 63
Score = 82.6 bits (195), Expect = 8e-15
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
MAPKQRM +AN SKN+T RGNVPK K E ++P + WL+ LFIFVVCGSA+F+
Sbjct: 1 MAPKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFE 56
>UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep:
Zgc:56419 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 66
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/57 (64%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTK-EKEDQYPVAPWLLALFIFVVCGSAVFQ 255
M KQR+R+ANE SKNIT+RGNV K+T+ +E++ V PWLLALF+FVVCGSA+FQ
Sbjct: 1 MVAKQRIRMANEKHSKNITLRGNVAKSTRGTQEEKAVVGPWLLALFVFVVCGSAIFQ 57
>UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4;
n=33; Eumetazoa|Rep: Ribosome-attached membrane protein
4 - Homo sapiens (Human)
Length = 66
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQ 255
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQ 57
>UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RAMP4
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ribosome associated membrane protein RAMP4
containing protein - Tetrahymena thermophila SB210
Length = 107
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +1
Query: 97 KQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
KQ+M++ + + +KN+T RG VP + K KE++ V PW+L +F+FVV GSA+FQ
Sbjct: 48 KQQMKLKSNLHNKNVTNRGKVPSSLKSKEEK-SVGPWVLGIFLFVVVGSAIFQ 99
>UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02042 protein - Schistosoma
japonicum (Blood fluke)
Length = 79
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +1
Query: 85 KMAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
+M+ QRM++ N A N+ RGNVPK+ K + Q + +L L +FVVCGSAVF+
Sbjct: 14 RMSASQRMKVQNGKAHGNVVNRGNVPKSLKSSDSQSNMNACILGLIVFVVCGSAVFE 70
>UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +1
Query: 133 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
KNIT RG+VP+TT +K YPV P LL F+FVV GS++FQ
Sbjct: 54 KNITKRGSVPETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQ 94
>UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep:
F17L21.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +1
Query: 133 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
KNI RG VP+TT +K YPV P LL F+FVV GS++FQ
Sbjct: 26 KNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQ 66
>UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 75
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 100 QRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
Q M++ ++ N+ +G VPK+ +KE+ PV P LL +F+FVV GSA+FQ
Sbjct: 13 QTMKLRSQNYQGNVNKQGKVPKSLIKKEENLPVGPILLGVFLFVVVGSALFQ 64
>UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11;
Liliopsida|Rep: Os11g0637400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 573
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 133 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 243
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 27 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 63
>UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 460
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 133 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 243
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 17 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 53
>UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;
n=3; Plasmodium|Rep: Arabidopsis thaliana
F17L21.12-related - Plasmodium yoelii yoelii
Length = 67
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
MA +++ E NIT RGNVP + +K +Y V P LL +FIF+V GS V Q
Sbjct: 1 MASNRKINKKIETFDNNITNRGNVPTSIAKKGKKYTVGPILLGIFIFIVIGSVVIQ 56
>UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 65
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
MA + ++ E+ KNI RG+V ++ +K+ YPV P+ L LFIFVV GSA+ Q
Sbjct: 1 MAQSRFTKLKGELYEKNIDKRGSV--SSSKKKSGYPVGPFALGLFIFVVIGSAIIQ 54
>UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein
RAMP4, putative; n=3; Plasmodium|Rep: Ribosome
associated membrane protein RAMP4, putative - Plasmodium
vivax
Length = 102
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +1
Query: 82 NKMAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
+KMA +++ NIT RGNVP + +K ++PV P LL +F+FVV GS Q
Sbjct: 33 SKMASNRKISQKINAFDNNITHRGNVPASLVKKGKKHPVGPILLVIFVFVVIGSVFIQ 90
>UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome
attached membrane protein 4; n=1; Pan troglodytes|Rep:
PREDICTED: similar to ribosome attached membrane protein
4 - Pan troglodytes
Length = 231
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 160 PKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
P+ E++ V PWLLALFIFVVCGSA+FQ
Sbjct: 191 PRPRNAPEEKASVGPWLLALFIFVVCGSAIFQ 222
>UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome
associated membrane protein 4; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosome associated membrane
protein 4 - Macaca mulatta
Length = 177
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKE 177
M KQR+R+ANE SKNIT RGNV KT K+
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLKK 30
>UniRef50_Q5ATU0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 78
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYP-VAPWLLALFIFVVCGSAVFQ 255
M + R ANE +K+ + PKTT K + P ++ + L FVVCG VF+
Sbjct: 1 MTQTPQQRRANEKFAKHEASKRGKPKTTTTKHNTKPSLSTGWVVLLAFVVCGGLVFE 57
>UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 59
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 88 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQ 255
M+ + +R ++ +NI RG + K+KED + P++L IFVV GS + Q
Sbjct: 1 MSQSRTLRQKSQKYQENIEKRGVA--SPKKKEDGLNINPYVLGFIIFVVVGSTLLQ 54
>UniRef50_Q7MQL9 Cluster: Putative uncharacterized protein; n=1;
Wolinella succinogenes|Rep: Putative uncharacterized
protein - Wolinella succinogenes
Length = 377
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 260 DYWNTAEPHTTKMKRARSQGATGYWSS 180
DY N E H KMK S+G GYWS+
Sbjct: 80 DYVNGIEFHDKKMKEIASKGVAGYWSA 106
>UniRef50_A6DKY0 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 332
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 NNPINKT-SLNHEDNWRTAIENTIK*QHYPSKVRHNLHQHLF 376
NN INK +L+ N A IK Q K HNLH+H F
Sbjct: 125 NNKINKLLALSKSSNQHEATNAAIKAQALMDKYNHNLHEHNF 166
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,773,709
Number of Sequences: 1657284
Number of extensions: 13465136
Number of successful extensions: 30601
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 29759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30593
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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