Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00056
(818 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 167 4e-40
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 161 1e-38
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 148 1e-34
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 143 4e-33
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 137 3e-31
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 133 4e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 132 1e-29
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 127 3e-28
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 112 1e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 109 6e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 2e-22
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 107 3e-22
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 106 6e-22
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 99 1e-19
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 98 3e-19
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 97 4e-19
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 93 6e-18
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 87 7e-16
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 86 9e-16
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 86 9e-16
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 83 6e-15
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 81 4e-14
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 81 4e-14
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 79 1e-13
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 78 2e-13
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 77 5e-13
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 75 2e-12
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 72 2e-11
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 71 3e-11
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 71 5e-11
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 70 6e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 70 6e-11
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 70 6e-11
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 69 1e-10
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 1e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 68 3e-10
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 66 1e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 60 7e-08
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 55 2e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 50 5e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 48 2e-04
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 4e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 4e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 4e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 45 0.002
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 45 0.003
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 44 0.004
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.004
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 43 0.008
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 43 0.008
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 43 0.008
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 43 0.011
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 43 0.011
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.019
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 42 0.025
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 41 0.033
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 40 0.057
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 40 0.075
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 40 0.075
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.100
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 40 0.100
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.100
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 39 0.17
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.17
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 39 0.17
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 38 0.30
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 37 0.53
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.53
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 37 0.70
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.70
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 36 1.2
UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 36 1.6
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 2.8
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 34 3.8
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 5.0
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 6.6
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 33 8.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 167 bits (405), Expect = 4e-40
Identities = 76/93 (81%), Positives = 82/93 (88%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VRLIPAP
Sbjct: 140 GVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAP 199
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 200 RGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 232
Score = 150 bits (364), Expect = 4e-35
Identities = 73/84 (86%), Positives = 76/84 (90%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 64 TKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTR 123
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGD NGH+GLGVKCSKEV
Sbjct: 124 FKAFVAIGDYNGHVGLGVKCSKEV 147
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 161 bits (392), Expect = 1e-38
Identities = 75/107 (70%), Positives = 86/107 (80%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + + TAIRGA+ILAKLS+LPV RGYWGN+I KPHTVP KVTG+CGSV VRLIPAP
Sbjct: 80 GVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAP 139
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPHMLPLPR 804
RGTG VSAPVPKKLL MAG+ DCYTSARG T TW L + ++ PR
Sbjct: 140 RGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTLPRLLLMRSPR 186
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 428 RTRFKAFVAIGDNNGHIGLGVKCSKE 505
+ RFKAFVAIGD+NG +G GVKCSKE
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKE 86
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 148 bits (359), Expect = 1e-34
Identities = 68/96 (70%), Positives = 79/96 (82%)
Frame = +1
Query: 475 YWFGCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLI 654
+ G + + TAIR AIILAKLS++P+R+GYWGNKIGKP+TVPCKVTG CGSV V LI
Sbjct: 81 FGLGVKCSKEVATAIREAIILAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLI 140
Query: 655 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
PAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +
Sbjct: 141 PAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTAS 176
Score = 84.6 bits (200), Expect = 3e-15
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEV
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEV 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 143 bits (347), Expect = 4e-33
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = +1
Query: 511 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 690
TAIRGAII+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+AP
Sbjct: 122 TAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAP 181
Query: 691 VPKKLLQMAGVQDCYTSARGSTGT 762
V K+ LQ+AG++DCYT +RGST T
Sbjct: 182 VTKRFLQLAGIEDCYTQSRGSTKT 205
Score = 140 bits (338), Expect = 5e-32
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTR
Sbjct: 38 TKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTR 96
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFV IGD++GH+GLG+KC+KEV
Sbjct: 97 FKAFVVIGDSDGHVGLGIKCAKEV 120
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 137 bits (332), Expect = 3e-31
Identities = 67/84 (79%), Positives = 70/84 (83%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TR
Sbjct: 4 TKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTR 63
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFV IGD NGH+GL VKCSKEV
Sbjct: 64 FKAFVPIGDYNGHVGLSVKCSKEV 87
Score = 99 bits (238), Expect = 7e-20
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +1
Query: 511 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
TAIRGAIILAKLS++PV RGYWGNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 89 TAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 133 bits (322), Expect = 4e-30
Identities = 65/76 (85%), Positives = 68/76 (89%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 39 TKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTR 98
Query: 437 FKAFVAIGDNNGHIGL 484
FKAFVAIGD NGH+GL
Sbjct: 99 FKAFVAIGDYNGHVGL 114
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 132 bits (318), Expect = 1e-29
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 693
AIR II+AKLSV+P+RRGYWG +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P
Sbjct: 124 AIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPA 183
Query: 694 PKKLLQMAGVQDCYTSARGSTGTWEILLK 780
KKLLQ+AGV+D YT + G T T E LK
Sbjct: 184 VKKLLQLAGVEDVYTQSNGKTRTLENTLK 212
Score = 123 bits (297), Expect = 5e-27
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTR
Sbjct: 39 TKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTR 97
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKA V +GD+NGH+GLG+K +KEV
Sbjct: 98 FKAVVVVGDSNGHVGLGIKTAKEV 121
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 127 bits (307), Expect = 3e-28
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQKQT AGQR R
Sbjct: 54 TKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMR 113
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFV +GD NGHIGLGVK KEV
Sbjct: 114 FKAFVVVGDCNGHIGLGVKACKEV 137
Score = 123 bits (297), Expect = 5e-27
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 693
+I+G++ILAKL+++PVRRGYWG+K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 140 SIQGSMILAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGT 199
Query: 694 PKKLLQMAGVQDCYTSARGSTGT 762
KK+L MAG+ D YT +RG T T
Sbjct: 200 VKKVLAMAGLHDVYTCSRGHTRT 222
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 112 bits (269), Expect = 1e-23
Identities = 56/97 (57%), Positives = 73/97 (75%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT AGQ+TR
Sbjct: 68 TKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTR 126
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSC 547
FKA+V +GD++ HIGLG K +KEV + L +L C
Sbjct: 127 FKAYVVVGDSHQHIGLGWKSAKEVQGAIQELCNLNQC 163
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 555 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 734
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 735 H 737
H
Sbjct: 229 H 229
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 109 bits (263), Expect = 6e-23
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + + +AIRGAI AK ++ PVR G W GKPHTV CK +GKCG+ V++IPAP
Sbjct: 101 GTKASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAP 160
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPHMLPL 798
RGTGI+S V KK+ ++AG++D YT + G+T T E K + L
Sbjct: 161 RGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAAL 205
Score = 98.7 bits (235), Expect = 2e-19
Identities = 48/97 (49%), Positives = 61/97 (62%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQKQTRAGQ+TR
Sbjct: 25 TAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTR 84
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSC 547
KA V +GD GH+G+G K SKE ++ C
Sbjct: 85 IKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKC 121
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 2e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 287 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 466
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 467 NGHIG 481
NG+ G
Sbjct: 62 NGYAG 66
Score = 59.7 bits (138), Expect = 9e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 516 HSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS 695
H R ++P + ++RLLG QDR+A HRPLQG R + C +W+ + + +
Sbjct: 78 HPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCA 137
Query: 696 *EASSDGWCTGLLHLSSWFNWHLG 767
EA+ D W LLHLS + H G
Sbjct: 138 QEAAHDSWYLRLLHLSQGLHCHPG 161
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 107 bits (257), Expect = 3e-22
Identities = 53/62 (85%), Positives = 55/62 (88%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 64 TKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTR 123
Query: 437 FK 442
FK
Sbjct: 124 FK 125
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +1
Query: 613 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 106 bits (255), Expect = 6e-22
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 517 IRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVP 696
I+ IIL KL ++PV RGY G+K KPHTV CKVTG GSV++ LIPAPR T I SAP+P
Sbjct: 130 IQRVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMP 188
Query: 697 KKLLQMAGVQDCYTSARG 750
KKLL MAG+ DC+TSARG
Sbjct: 189 KKLLMMAGINDCHTSARG 206
Score = 76.6 bits (180), Expect = 7e-13
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
+KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 53 SKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--Y 109
Query: 437 FKAFVAIGDNNGHIGLGV 490
+KA GD NGH+ G+
Sbjct: 110 YKA----GDYNGHVITGL 123
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 99.1 bits (236), Expect = 1e-19
Identities = 52/90 (57%), Positives = 64/90 (71%)
Frame = +1
Query: 493 VQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 672
V G ++ AIILAKLS++PV G ++ +PH VPC+VTG+CGS+ V LIPAPRGT
Sbjct: 120 VSLGIKYSMEVAIILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGT 178
Query: 673 GIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
G VSAPVP KLL MAG+ D +SA G T T
Sbjct: 179 GTVSAPVP-KLLMMAGIDDS-SSASGCTAT 206
Score = 65.3 bits (152), Expect = 2e-09
Identities = 50/125 (40%), Positives = 65/125 (52%)
Frame = +2
Query: 224 RQGRPERVGSFTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV 403
RQGR ++ TKLG LV+E KI LE IY FSL + + F P+
Sbjct: 47 RQGREDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPL 96
Query: 404 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSCLFYQFEEVTGVT 583
KQT Q+TRFKA V +G + GH+ LG+K S EV + +L+ LS + E TG
Sbjct: 97 IKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVAI----ILAKLSII--PVETATGGK 149
Query: 584 RSESH 598
R E H
Sbjct: 150 RLEPH 154
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 97.9 bits (233), Expect = 3e-19
Identities = 49/63 (77%), Positives = 52/63 (82%)
Frame = +2
Query: 254 FTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRT 433
FTKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ T
Sbjct: 63 FTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWT 122
Query: 434 RFK 442
RFK
Sbjct: 123 RFK 125
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +1
Query: 613 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T T
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTAT 173
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 97.5 bits (232), Expect = 4e-19
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1
Query: 577 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 757 GT 762
+
Sbjct: 67 AS 68
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/90 (55%), Positives = 61/90 (67%)
Frame = +1
Query: 511 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 690
TAIRGAIIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAP
Sbjct: 49 TAIRGAIILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAP 108
Query: 691 VPKKLLQMAGVQDCYTSARGSTGTWEILLK 780
VPKKLL+MA + D + ARG T + ++K
Sbjct: 109 VPKKLLRMASIDDGDSLARGCTAILDNVIK 138
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 350 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 490
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L V
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 86.6 bits (205), Expect = 7e-16
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AI+ AI AK++++PVRRG W G+PH++P KV GK GSV V L+PAP+GTG+V
Sbjct: 102 AIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVG 161
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGTWE 768
V K LL AG++D +++ +G T T E
Sbjct: 162 SVLKTLLTYAGIKDAWSTTKGETRTTE 188
Score = 70.5 bits (165), Expect = 5e-11
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT AG+ +R
Sbjct: 17 TSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISR 75
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
+K V +G+ +G++ +G +K++
Sbjct: 76 YKVLVIMGNMDGYVSIGTGKAKQL 99
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 86.2 bits (204), Expect = 9e-16
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +2
Query: 275 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 454
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 455 IGDNNGHIGLGVKCSKEV 508
I D N ++ LGV+ KE+
Sbjct: 191 IRDCNDNVSLGVEWPKEL 208
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 86.2 bits (204), Expect = 9e-16
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + S I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + PAP
Sbjct: 146 GVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAP 205
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
+GTGIV++ +L+++G++DC+T + G T
Sbjct: 206 KGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/78 (29%), Positives = 46/78 (58%)
Frame = +2
Query: 299 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 478
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 479 GLGVKCSKEVPLPFEALL 532
GLGVK S + +A L
Sbjct: 144 GLGVKSSMDSKAGIKAAL 161
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AIR AI AKL+++ ++RG W + +PH+VP V GK GSV VRLIP PRG G+V
Sbjct: 109 AIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIG 168
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGT 762
V KK+L++AGVQD ++ G T T
Sbjct: 169 DVGKKILRLAGVQDVWSQTFGETRT 193
Score = 66.9 bits (156), Expect = 6e-10
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAG 424
TKLG +V+EG+I + I+ IKE EIID L P +N EVL I + T +G
Sbjct: 20 TKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSG 78
Query: 425 QRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 79 RRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+ R
Sbjct: 38 TKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPR 96
Query: 437 FKAFVAIGDNNGHIGL 484
KA VAIGD+NGH L
Sbjct: 97 LKASVAIGDHNGHRAL 112
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AIR AI AKLS++ VR G W G PH++P G CGSV V L+PAPRG G+V+
Sbjct: 105 AIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAG 164
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGT 762
V K +L +AGV+D +T G T T
Sbjct: 165 NVAKAVLGLAGVKDAWTKTFGDTRT 189
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ+ ++G+R R
Sbjct: 20 TQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRAR 78
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
++A V +G+ NG++G+G+ SKEV
Sbjct: 79 YRATVVVGNKNGYVGVGMGKSKEV 102
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AI A A L+V P++ G W + + H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 135 AIEKATNAAYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAG 194
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGT 762
K+LL++AG++D +T+A+GST T
Sbjct: 195 GKIKRLLELAGLKDAWTTAKGSTPT 219
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T LG+ V G+I LE I L I+E II L P L EV+ + +QK T GQ TR
Sbjct: 50 TILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTR 108
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEVPLPFE 523
FKA VA G+ NG++G+G SK++ + E
Sbjct: 109 FKAIVATGNENGYLGIGQGKSKQMRIAIE 137
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AI+ AI +AKL+++ V RG W G+PHTV + GK GSV V L PAPRG G+
Sbjct: 96 AIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGG 155
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGT 762
+K+L++AG++D +T + G+T T
Sbjct: 156 ETVRKVLELAGIEDIWTRSSGNTRT 180
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G+R +
Sbjct: 11 TRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVK 69
Query: 437 FKAFVAIGDNNGHIG 481
F+ VA+G+ +G IG
Sbjct: 70 FRCVVAVGNRDGLIG 84
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +1
Query: 490 EVQQGSPTAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
+ ++ +P AI+ AI AKL+++ ++RG W GKPHT+P V GK GSV+V L PAP
Sbjct: 87 KAKEAAP-AIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAP 145
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
+G G+ V K +L+MAG+ D + A G T T
Sbjct: 146 QGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKT 178
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T +G+R
Sbjct: 9 TELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMN 67
Query: 437 FKAFVAIGDNNGHIGLGVKCSKE 505
+ +G+ NG++G+G +KE
Sbjct: 68 YSITAVVGNGNGYVGVGRGKAKE 90
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AI A A L+V P++ G W + + H+VP KV GK GSV + ++PAPRG G+V+
Sbjct: 116 AIEKANNQALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAG 175
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGT 762
++LL++AG++D YT+A+GST T
Sbjct: 176 GKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 64.5 bits (150), Expect = 3e-09
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T LG+ V G+I LE I I+E II L P L EV+ + +QK T GQ TR
Sbjct: 31 TALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTR 89
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEVPLPFE 523
FKA VA G+ NG++G+G +K++ + E
Sbjct: 90 FKAIVAAGNENGYLGIGQGKAKQMRIAIE 118
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 72.1 bits (169), Expect = 2e-11
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T T
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTAT 213
Score = 50.8 bits (116), Expect = 4e-05
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +2
Query: 317 FSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 496
FSL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KC
Sbjct: 83 FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKC 138
Query: 497 SKE 505
SK+
Sbjct: 139 SKK 141
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/91 (40%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 514 AIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
AI+ AI +AKL+++ V RG W ++ G +++ K GK GSVTV + PAP+G G+ +A
Sbjct: 147 AIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAA 206
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGTWEILLK 780
+ +L++AGV+D +T++ G+T T L K
Sbjct: 207 ETVRNILELAGVEDAWTNSDGNTRTTVNLAK 237
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G+R +
Sbjct: 62 TRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVK 120
Query: 437 FKAFVAIGDNNGHIG 481
F+ VA+G+ +G++G
Sbjct: 121 FRCVVAVGNRDGYLG 135
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 70.5 bits (165), Expect = 5e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 655 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 36
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 70.1 bits (164), Expect = 6e-11
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +2
Query: 287 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 466
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 467 NGHIGLGVKCSKEV 508
N ++ LGV+ KE+
Sbjct: 61 NDNVSLGVERPKEL 74
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 70.1 bits (164), Expect = 6e-11
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q TR
Sbjct: 4 TKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTR 54
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
F +F I + GH G+GVKCSK+V
Sbjct: 55 FNSFDTI-NYGGHNGIGVKCSKKV 77
Score = 48.0 bits (109), Expect = 3e-04
Identities = 35/72 (48%), Positives = 40/72 (55%)
Frame = +1
Query: 547 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 726
S LP R Y GN I KP T PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 92 SCLP--RDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 727 DCYTSARGSTGT 762
CYTSAR T T
Sbjct: 145 SCYTSARSYTVT 156
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = -2
Query: 505 FLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW 326
FLAAL QT++ V V +G++ LE L+GT L L HDL + ++Q A+EEI+DLE F+
Sbjct: 56 FLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNG 115
Query: 325 *RKQVNALEFVDFSFANKTAEFG 257
R QV+ L+ D + A++ + G
Sbjct: 116 QRVQVDLLQGADLAIAHQATQLG 138
Score = 37.1 bits (82), Expect = 0.53
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -3
Query: 618 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSG 508
+LA GV +DLVTPV S++ N QL +D+S ++G G
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGG 54
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +1
Query: 526 AIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 699
AI AKL+++ V RG W G PH++P +V GK GSV V L PAP+G GIV+ K
Sbjct: 113 AINRAKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIK 172
Query: 700 KLLQMAGVQDCYTSARGSTGT 762
K+ ++AG++D + + G T T
Sbjct: 173 KIFRLAGIKDVWVRSFGKTKT 193
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----------- 403
TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 11 TKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYR 69
Query: 404 --QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFEALLS 535
QK+T G +TR++ +GD +GH+G+G+ S ++ + E ++
Sbjct: 70 MAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAIN 115
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = +1
Query: 478 WFGCEVQQGSPTA--IRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTV 645
+ G + +G A IR AI AKL+++PV RG W + G +VP K+TG+ GS V
Sbjct: 67 YVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGSTRV 126
Query: 646 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
L+PAP G G+V + +++L +AGV D ++ + G T T
Sbjct: 127 TLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +2
Query: 272 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 451
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 452 AIGDNNGHIGLGVKCSKEV 508
+G+++G++GL + KEV
Sbjct: 60 VVGNSDGYVGLAICKGKEV 78
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = +1
Query: 583 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 763 WEILLKP 783
KP
Sbjct: 112 LYNFSKP 118
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2
Query: 404 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFEAL 529
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEV F+ L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGL 42
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/72 (51%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 511 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSA 687
TA + AI L + + GY GNKIG PHT+PC VT + V V L APRGTG VSA
Sbjct: 102 TAAQRAITLLSF-LFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSA 160
Query: 688 PVPKKLLQMAGV 723
VPKKL +A +
Sbjct: 161 SVPKKLPLLASI 172
Score = 52.8 bits (121), Expect = 1e-05
Identities = 43/97 (44%), Positives = 52/97 (53%)
Frame = +2
Query: 263 LGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 442
LG LV+E KI LES FS +II+FFLG L DEVL+ M Q QRTR K
Sbjct: 30 LGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIK 79
Query: 443 AFVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSCLF 553
F + + L V CSKEV + ++LLS LF
Sbjct: 80 VFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSFLF 115
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = -1
Query: 776 SKISQVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVC 597
+K +V V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +C
Sbjct: 11 AKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LC 69
Query: 596 GFPILLPQ*PLRTGKTDN 543
G LLP P+ + DN
Sbjct: 70 GACCLLP--PVASTHRDN 85
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 60.1 bits (139), Expect = 7e-08
Identities = 34/90 (37%), Positives = 50/90 (55%)
Frame = -3
Query: 768 FPGAS*TTS*GVAVLYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLS 589
F + T+ GV + TS L +LL +W ++ T+ NQ + TTL L GV L+
Sbjct: 49 FQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRLT 108
Query: 588 DLVTPVTSSNW*NRQLSKDNSASNGSGTSL 499
+ TPVTSS+W N QL D++ S+G+ L
Sbjct: 109 QVGTPVTSSDWDNGQLGDDDTGSDGTSNFL 138
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = -2
Query: 508 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFD 329
+FL+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF D
Sbjct: 136 NFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQVW-QQLVNDLEFLD 194
Query: 328 W*RKQVNALEFVDFSFANKTAEFG 257
W R Q + + D + +++ + G
Sbjct: 195 WQRVQEDFFDGRDLAGLHQSTQLG 218
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 502 GSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 681
G P AIR AI AK +++ + K +T+P ++ GK G+ T+ + PA GTG++
Sbjct: 53 GVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVI 104
Query: 682 SAPVPKKLLQMAGVQDCYTSARGS 753
+ +++L++ GV D T +GS
Sbjct: 105 AGSASREILELVGVHDILTKIKGS 128
Score = 39.9 bits (89), Expect = 0.075
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
+++LKI V K T+ G+ F A+GD G IGLG+ + VP
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVP 55
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 362 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFE 523
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV + E
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVE 121
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +1
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 729
I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+
Sbjct: 136 ITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQN 183
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/89 (30%), Positives = 49/89 (55%)
Frame = +1
Query: 508 PTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
P AI+ AI A +++ V++ K ++ V G+ G+ V L+PAP GTGI++
Sbjct: 95 PDAIKKAIKNANNNLIKVKQT-------KKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAG 147
Query: 688 PVPKKLLQMAGVQDCYTSARGSTGTWEIL 774
+ ++++AG D YT +RG+ ++
Sbjct: 148 GPVRAVVELAGFTDIYTKSRGANAPMNVI 176
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 368 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EVP
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVP 95
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 358
TKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 39 TKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
L + V+ + V K + G+R RF A V +GD NGH+G G ++EVP
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVP 58
Score = 45.6 bits (103), Expect = 0.002
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +1
Query: 481 FGCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPA 660
FG Q P AI+ A+ AK +++ V +G T+P ++ G+ GS V + PA
Sbjct: 49 FGTGKAQEVPEAIKKAVDDAKKNLISVPI------VGT--TIPHEIHGQFGSGNVLMKPA 100
Query: 661 PRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
GTG++S + +L++AGV D T + GS
Sbjct: 101 AEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +1
Query: 592 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEI 771
K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+ I
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPVNI 155
Query: 772 L 774
+
Sbjct: 156 V 156
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 374 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
+++V+KI V K + G+R F A +GD G +G+G + EVP
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVP 76
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFE 523
+++L + K + G+R RF A V +GD NG +G+G+ +KEVP+ E
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIE 67
Score = 39.5 bits (88), Expect = 0.100
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 PTAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 681
P AIR AI AK +++ PV G T+P +V G+ + V L PA GTGI+
Sbjct: 61 PEAIRKAISAAKRNIVEVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGII 110
Query: 682 SAPVPKKLLQMAGVQDCYTSARGSTGTWEILL 777
+ + ++++AG+Q+ T + GST + L
Sbjct: 111 AGGTVRAVVELAGIQNILTKSLGSTNPLNLAL 142
Score = 42.7 bits (96), Expect = 0.011
Identities = 25/87 (28%), Positives = 44/87 (50%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSCLFY 556
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EVP EA+ +S
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVP---EAIRKAISAAKR 73
Query: 557 QFEEVTGVTRSESHTPSLARSPASVVL 637
EV + + H + R AS VL
Sbjct: 74 NIVEVPVINGTIPH-EVIGRQDASKVL 99
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 667 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPHM 789
G+ +V+ VPKK+L+ AG++D +TS+RGST T +K M
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVKHQM 42
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 508 PTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 687
P AIR A+ AK ++ V K+ K T+ +V GK G+ V + PAP+GTG+++
Sbjct: 124 PVAIRKALKSAKNNMYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAG 176
Query: 688 PVPKKLLQMAGVQDCYTSARG 750
K +L++ G +D Y+ G
Sbjct: 177 GPIKVVLELCGFKDVYSKNLG 197
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFEALL 532
L ++++ + + K T+ G+ RF A IGD G++G G+ S EVP+ L
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKAL 131
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 36.7 bits (81), Expect = 0.70
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPL 514
L + ++ + T+ G+R F V +GD GH+G G +KEV L
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTL 75
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 365 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
P L ++V+KI + K + G R RF A V +GD G IG +KE+
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEI 60
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 753
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 362 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
G L D V+ I V K + G+ F A V +GD NG +G+G S+EVP
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVP 91
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPLPFE 523
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V F+
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFK 76
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIK 334
TKLGRLV++ KI LE IYLFSLPIK
Sbjct: 64 TKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 356 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EVP
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVP 89
Score = 39.5 bits (88), Expect = 0.100
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 750
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.019
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 613 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 750
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 41.5 bits (93), Expect = 0.025
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
+ V+ I V K + G+R F A V +GD NG +G+G +KEVP
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP 88
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGS 161
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 41.1 bits (92), Expect = 0.033
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
GC+ + TA++ A++ AK SV+ V G T+P +V K + ++PA
Sbjct: 551 GCQAGREVATAVKRALVDAKKSVVRVPLVGAG-------TIPHRVEAKFNAARCVMVPAA 603
Query: 664 RGTGIVSAPVPKKLLQMAGVQD 729
GTG+++ + +L++AGVQ+
Sbjct: 604 DGTGVLAGSSIRSVLELAGVQN 625
Score = 35.5 bits (78), Expect = 1.6
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 350 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EV
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREV 558
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 40.3 bits (90), Expect = 0.057
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +1
Query: 502 GSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 681
G + GA+ K V R+ + K +++P ++G G+ V L PA GTG++
Sbjct: 106 GKANDVIGAV---KKGVSDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVI 162
Query: 682 SAPVPKKLLQMAGVQDCYTSARGS 753
+ + +L++AG+++ + GS
Sbjct: 163 AGGAVRTVLELAGIKNVLAKSLGS 186
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
+ V++I V K + G++ F+A + +GD NG +G+GV + +V
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDV 111
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 39.9 bits (89), Expect = 0.075
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEV 229
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 729
T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 39.9 bits (89), Expect = 0.075
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 508
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEV 192
Score = 38.3 bits (85), Expect = 0.23
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 547 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 726
S + RR + K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 199 SAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 258
Query: 727 DCYTSARGS 753
+ GS
Sbjct: 259 NALGKQLGS 267
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.5 bits (88), Expect = 0.100
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 39.5 bits (88), Expect = 0.100
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 362 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
G L ++++ I V K + G+R F A V +GD G +G G ++EVP
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVP 105
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.100
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 359 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
L L D V+KI + G+R F A V +G+ +G +G G + EVP
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVP 67
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 511 WDFLAALHTQTNMTVVVANGNKCLET 434
W+FL T+TNMT+ V+N NKC ET
Sbjct: 32 WNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = -3
Query: 393 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLV 256
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLV
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLV 45
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 33.9 bits (74), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
++++ I V + G+R F A V +GD G +G G + EVP
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVP 135
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
L ++++ I V K + G+R F A V +GD NG +G G+ + +VP
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVP 62
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
D+++ I V K + G+R F A V +GD G +G G ++EVP
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVP 68
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.1 bits (82), Expect = 0.53
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVP 511
L ++V+ I K + G+R F A +GD NG +G+G + EVP
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVP 117
Score = 36.3 bits (80), Expect = 0.93
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 592 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 37.1 bits (82), Expect = 0.53
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 371 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVPL 514
L ++++ + V K + G+ F A +GD G +G+G S+EVPL
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPL 68
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEIL 774
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST + I+
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPYNIV 147
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 36.7 bits (81), Expect = 0.70
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +1
Query: 511 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 690
TA+R A + A+ +++P+ W HT P +TG+ + + P P G P
Sbjct: 212 TALRRAKVDAQRNLVPISLDLW-------HTCPIPLTGRFNDAEIEINPRPLGFNAYGNP 264
Query: 691 VPKKLLQMAGVQDCYTSAR 747
+L + G+ C R
Sbjct: 265 QIASMLMLTGIHHCSFKVR 283
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.70
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 625 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 35.9 bits (79), Expect = 1.2
Identities = 28/91 (30%), Positives = 38/91 (41%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
T L L + KI E + LF P K I F G SL D+++ + + + QRT+
Sbjct: 38 TTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK 97
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEVPLPFEAL 529
GH GL CS EV + L
Sbjct: 98 -----------GHSGLSSMCSGEVATAIQVL 117
>UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1313
Score = 35.9 bits (79), Expect = 1.2
Identities = 31/98 (31%), Positives = 43/98 (43%)
Frame = -3
Query: 738 GVAVLYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSN 559
G +Y +HL R+ SS +R P C ++ AG + +S+ V S
Sbjct: 374 GNGTIYHAHLAASTRSSLAQPSSYSRPARSPACSPSSAAGAASAAPTPISNSVPAAPQSI 433
Query: 558 W*NRQLSKDNSASNGSGTSLLHFTPKPI*PLLSPMATN 445
+R S N A N SL F P PLLSP+AT+
Sbjct: 434 RNSRNASNLNLAINHVRKSL--FIGPPPSPLLSPVATS 469
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.5 bits (78), Expect = 1.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 377 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 490
+ V++I V K + G++ F+A V +G+ G +G+GV
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGV 56
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 598 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 753
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.3 bits (75), Expect = 3.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 356 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 505
++ L + L + V QT G+ F A V +GD NG +GLG S+E
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSRE 188
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 33.5 bits (73), Expect = 6.6
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -3
Query: 261 LVKEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPP 100
L +EPT S CR+ GR H R G HR+ IR R HRL + PP
Sbjct: 144 LSREPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPP 203
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 33.1 bits (72), Expect = 8.7
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 601 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 756
T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,661,214
Number of Sequences: 1657284
Number of extensions: 17828333
Number of successful extensions: 50602
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 47549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50418
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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