Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00054
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QDG3 Cluster: ENSANGP00000014233; n=2; Culicidae|Rep:... 115 1e-24
UniRef50_Q9XZ06 Cluster: CG11092-PA; n=2; Sophophora|Rep: CG1109... 95 2e-18
UniRef50_Q9VFE7 Cluster: CG7262-PA; n=2; Sophophora|Rep: CG7262-... 94 2e-18
UniRef50_Q8N1F7 Cluster: Nuclear pore complex protein Nup93; n=4... 90 5e-17
UniRef50_UPI00003C0670 Cluster: PREDICTED: similar to nucleopori... 89 9e-17
UniRef50_Q5C809 Cluster: SJCHGC05220 protein; n=1; Schistosoma j... 72 1e-11
UniRef50_Q6CB43 Cluster: Similar to sp|P34077 Saccharomyces cere... 55 2e-06
UniRef50_Q5KK42 Cluster: Nucleoporin-interacting protein NIC96, ... 55 2e-06
UniRef50_O94418 Cluster: Meiotically up-regulated gene 87 protei... 53 5e-06
UniRef50_Q6FKS2 Cluster: Similar to sp|P34077 Saccharomyces cere... 51 3e-05
UniRef50_P34077 Cluster: Nucleoporin NIC96; n=7; Saccharomycetac... 45 0.001
UniRef50_Q6FUM4 Cluster: Similar to sp|P34077 Saccharomyces cere... 44 0.003
UniRef50_O14310 Cluster: Nucleoporin npp106; n=1; Schizosaccharo... 44 0.003
UniRef50_A6RPQ6 Cluster: Ribonuclease; n=3; Sclerotiniaceae|Rep:... 44 0.004
UniRef50_Q9BKT9 Cluster: Nuclear pore complex protein protein 13... 41 0.030
UniRef50_Q4P7V0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.030
UniRef50_Q55GW5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.068
UniRef50_Q0V0C3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.068
UniRef50_Q38AQ7 Cluster: Nucleoporin interacting component (NUP9... 38 0.21
UniRef50_O22224 Cluster: Uncharacterized protein At2g41620; n=5;... 36 1.1
UniRef50_A2FFD2 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_A5UMD4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q4SNY8 Cluster: Chromosome 15 SCAF14542, whole genome s... 33 4.5
UniRef50_A0V7Z2 Cluster: Sensor protein; n=2; cellular organisms... 33 4.5
UniRef50_Q12C20 Cluster: ABC transporter related; n=5; Bacteria|... 33 5.9
UniRef50_Q9C2J7 Cluster: Related to nucleoporin-interacting prot... 33 5.9
>UniRef50_Q7QDG3 Cluster: ENSANGP00000014233; n=2; Culicidae|Rep:
ENSANGP00000014233 - Anopheles gambiae str. PEST
Length = 819
Score = 115 bits (276), Expect = 1e-24
Identities = 52/116 (44%), Positives = 78/116 (67%)
Frame = +3
Query: 201 HKFPIQNTSSEFYRSL*KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETE 380
+K I+N + + R AVYC++GCCD+ + H ++A+T DD+LW++LS IRT + E
Sbjct: 373 YKRQIRNATDPYKR----AVYCIVGCCDIQEPHADIAKTTDDFLWIQLSLIRTDGDDSAE 428
Query: 381 SFSYSDLQKLILEEYGETHYHAYEKPVVYFQVLALTGQFEPAMNSSREYQDIKYTV 548
+ S LQ +ILE+YGE HY+A E+P +YFQ+LALTGQ+E + ++ KY V
Sbjct: 429 HLTCSGLQSMILEQYGEKHYNANEQPHLYFQLLALTGQYEAGIEFLSRFE--KYRV 482
Score = 107 bits (256), Expect = 3e-22
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = +1
Query: 10 GFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSDK 189
G DG +D +PLWPMVYYCLR GD +AL C++ AG+ HE+ IA LEE NPE+ + +
Sbjct: 305 GLQDGQVDGKPLWPMVYYCLRCGDIASALKCMQMAGQGHEDLIAVLEEKCHNPEQKTNPR 364
Query: 190 LQTAINFQYRIQVRNSTDPYKR 255
L+ I QY+ Q+RN+TDPYKR
Sbjct: 365 LELQIRMQYKRQIRNATDPYKR 386
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = +2
Query: 500 ASYEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPPL 649
A EFLSR +Y+VH VH+ LAL++++M+G PRN+Q PLLSVD EDP P+
Sbjct: 469 AGIEFLSRFEKYRVHAVHIGLALNELHMIGGPRNLQEPLLSVDFEDPHPM 518
>UniRef50_Q9XZ06 Cluster: CG11092-PA; n=2; Sophophora|Rep:
CG11092-PA - Drosophila melanogaster (Fruit fly)
Length = 823
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRT--RSANETESFSYSDLQKLILEEY 425
KAVY V+ CD H E+ R+ DD+LW++LS +R +S + TE ++S LQ LILE+Y
Sbjct: 381 KAVYVVLLACDPHFTHVELMRSIDDFLWMQLSILRRSDQSDSNTEQLTFSGLQSLILEKY 440
Query: 426 GETHYHAYEKPVVYFQVLALTGQFEPAM 509
GE +++A EK +YFQVL LTGQFE A+
Sbjct: 441 GENYFNAREKAALYFQVLTLTGQFEAAI 468
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +2
Query: 500 ASYEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPPL 649
A+ EFL+R + + H +HMA+AL+++ MLGTPR+V+ LLS D +DP P+
Sbjct: 466 AAIEFLARTEKNRTHAIHMAIALNEISMLGTPRSVEQSLLSSDPDDPKPM 515
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +1
Query: 37 RPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSDKLQTAINFQY 216
+PLWP VYY LRSGD +AA L+++G + + L L KL+ + +Y
Sbjct: 310 QPLWPHVYYSLRSGDMDAAALYLKESG-TCPDLLTLLTLRKNGDRDNLMVKLEGQLKLEY 368
Query: 217 RIQVRNSTDPYKR 255
++R TDPYK+
Sbjct: 369 NSRLRACTDPYKK 381
>UniRef50_Q9VFE7 Cluster: CG7262-PA; n=2; Sophophora|Rep: CG7262-PA
- Drosophila melanogaster (Fruit fly)
Length = 796
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/86 (48%), Positives = 64/86 (74%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGE 431
KAVYC++ CDV++ H EVA+T DD+LW++L+ I+ A+ +Y LQ +ILE+YGE
Sbjct: 369 KAVYCILLGCDVNEVHGEVAKTIDDFLWMRLAMIQPGDAD-----NYGKLQSMILEQYGE 423
Query: 432 THYHAYEKPVVYFQVLALTGQFEPAM 509
+++A ++P +YF+ LALTGQFE A+
Sbjct: 424 KYFNARQQPYLYFETLALTGQFEAAI 449
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 TDGVID---ERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSD 186
T G++D E PLWP+VYY LR G A+ LR+AG H+EF + + RN + +
Sbjct: 290 TIGLVDTVREIPLWPLVYYGLRCGAVKVAVEFLREAGSSHDEFAQLVAD--RNAGE-TNS 346
Query: 187 KLQTAINFQYRIQVRNSTDPYKR 255
K++ + QY ++RNSTD YK+
Sbjct: 347 KIENQLRLQYANKIRNSTDAYKK 369
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 500 ASYEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPPL 649
A+ EFL+R + H VHMA+AL ++ +LG+ R+V PLLS+D +DP PL
Sbjct: 447 AAIEFLARQDENRAHAVHMAIALFELGLLGSARSVSQPLLSIDIKDPQPL 496
>UniRef50_Q8N1F7 Cluster: Nuclear pore complex protein Nup93; n=44;
Eumetazoa|Rep: Nuclear pore complex protein Nup93 - Homo
sapiens (Human)
Length = 819
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLS---FIRTRSANETESFSYSDLQKLILEE 422
+AVYC+IG CDV+D EVA +DYLWLKL+ F +++ + + S QK +LE+
Sbjct: 388 RAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLED 447
Query: 423 YGETHYHAYEKPVVYFQVLALTGQFEPAM 509
YGE+H+ ++P +YFQVL LT QFE A+
Sbjct: 448 YGESHFTVNQQPFLYFQVLFLTAQFEAAV 476
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1
Query: 10 GFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSDK 189
G DG ++ P+W ++YYC+R GD AA + +A EF +EY+ + ++ LS
Sbjct: 307 GLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPA 366
Query: 190 LQTAINFQYRIQVRNSTDPYKR 255
+ + YR +RN+TDPYKR
Sbjct: 367 TENKLRLHYRRALRNNTDPYKR 388
Score = 37.1 bits (82), Expect = 0.36
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 500 ASYEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPPL 649
A+ FL R+ R + H VH+AL L ++ +L A LLS + DPP L
Sbjct: 474 AAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCL 523
>UniRef50_UPI00003C0670 Cluster: PREDICTED: similar to nucleoporin
93; n=2; Apocrita|Rep: PREDICTED: similar to nucleoporin
93 - Apis mellifera
Length = 824
Score = 89.0 bits (211), Expect = 9e-17
Identities = 44/86 (51%), Positives = 56/86 (65%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGE 431
KA YC + C+ D H +V TADDYLWLKL +R S E + + LQ I E YGE
Sbjct: 398 KAAYCALVPCEPDDLHPDVICTADDYLWLKLCQVRDHSDAENK-LTLDYLQTTISEIYGE 456
Query: 432 THYHAYEKPVVYFQVLALTGQFEPAM 509
++YHA+E+P VYF +L LTGQFE A+
Sbjct: 457 SYYHAHEQPFVYFSMLFLTGQFEAAI 482
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +1
Query: 7 QGFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSD 186
Q D +++ PLWP+VYY +R GD AALH L + D EF ALEE +P + LS
Sbjct: 316 QNLKDLMVENIPLWPLVYYSMRVGDYKAALHFLSQCKTDFSEFRIALEEASCDPSRRLSS 375
Query: 187 KLQTAINFQYRIQVRNSTDPYKR 255
++ + QYR VR+ TDPYK+
Sbjct: 376 SAESNLKLQYRKHVRSVTDPYKK 398
Score = 49.2 bits (112), Expect = 8e-05
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 500 ASYEFLSRIP--RYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPP 646
A+ EFL+R R+ H VH+A A+H+ +LG ++V APLLSVD D PP
Sbjct: 480 AAIEFLARGAGARHLPHAVHLAAAMHEQNLLGVSQSVLAPLLSVDPADKPP 530
>UniRef50_Q5C809 Cluster: SJCHGC05220 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05220 protein - Schistosoma
japonicum (Blood fluke)
Length = 276
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/105 (27%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANET---------ESFSYSDLQ 404
+ +Y ++G CD+++ + ++ DD+LW+K+S + + E+ ++ + LQ
Sbjct: 141 RLMYSILGQCDLNENYSDIVSNIDDFLWIKISQVVAQEPTESVVSSKNSVEDTLTLGQLQ 200
Query: 405 KLILEEYGETHYHAYEKPVVYFQVLALTGQFEPAMNSSREYQDIK 539
L+ E YGE H+ A+ +P+V+F++L LT Q+E A+ ++ ++
Sbjct: 201 TLLYETYGEVHFDAWSQPLVFFKILCLTQQYEAAIGFLARFEQLR 245
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +1
Query: 1 NSQGFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPL 180
N F DG++D P+WPM++YCLR+GD L R A + F+ LE+Y+++ + L
Sbjct: 58 NGWEFDDGLVDGVPVWPMLFYCLRTGDTQVTLEVARDALNNLGSFVPMLEDYVKH-NRRL 116
Query: 181 SDKLQTAINFQYRIQVRNSTDPYKR 255
Q I + +++ DPYKR
Sbjct: 117 RTHNQARIRQTCKQVAKSTRDPYKR 141
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 500 ASYEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLL 619
A+ FL+R + + H VH+AL L D+++L P + +PL+
Sbjct: 233 AAIGFLARFEQLRCHAVHIALVLKDLHLLLLPNWLHSPLV 272
>UniRef50_Q6CB43 Cluster: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P34077
Saccharomyces cerevisiae YFR002w NIC96 nuclear pore
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 882
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHY-EVARTADDYLWLKLSFIR-TRSANETESFSYSDLQKLILEEYG 428
A+Y +IG CD+S + + EV TA+D+LW L R T + ++ D+Q+ +L +G
Sbjct: 429 ALYKIIGRCDLSRKVFPEVLETAEDWLWAHLVVSRETVDGPLQDRYTLLDVQRTVLN-FG 487
Query: 429 ETHYHAYEK-PVVYFQVLALTGQFEPAMN 512
H++ K P +YFQ+L L G FE A++
Sbjct: 488 SKHFNPSGKSPGLYFQMLLLCGLFEAAVS 516
>UniRef50_Q5KK42 Cluster: Nucleoporin-interacting protein NIC96,
putative; n=2; Filobasidiella neoformans|Rep:
Nucleoporin-interacting protein NIC96, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 911
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Frame = +3
Query: 141 CFRRVYPKP*KTTKRQTADS--HKFPIQNTSSEFYRSL*KAVYCVIGCCDVSDEHYEVAR 314
CF+ P + + D + F ++ A+Y ++G +++ + +VA
Sbjct: 413 CFKSAMQSPERRLSKTQRDQLYNDFNAHIRNNPLIDQFKAALYKLVGRFELNRKTAKVAT 472
Query: 315 TADDYLWLKLSFIRTRSANET--ESFSYSDLQKLILEEYGETHYHA-YEKPVVYFQVLAL 485
T +D++WL+L+ +R + E + +DL +L LE+YG + A KP+ +F +L
Sbjct: 473 TTEDWMWLQLNLVRENRDGDAPQEQYDLADLGRL-LEKYGSDKFDAGGTKPLAWFNLLLF 531
Query: 486 TGQFEPAM 509
T QFE A+
Sbjct: 532 TAQFEKAV 539
>UniRef50_O94418 Cluster: Meiotically up-regulated gene 87 protein;
n=1; Schizosaccharomyces pombe|Rep: Meiotically
up-regulated gene 87 protein - Schizosaccharomyces pombe
(Fission yeast)
Length = 851
Score = 53.2 bits (122), Expect = 5e-06
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHY-EVARTADDYLWLKLSFIRT---RSANETESFSYSDLQKLILEE 422
AVY +IG CD+S + +DY+W +L R +S + E FS D+Q ++L
Sbjct: 403 AVYKIIGRCDLSKTSCPSICSVTEDYIWFQLILSREFTEKSVSAHEFFSLEDVQHILLS- 461
Query: 423 YGETHY-HAYEKPVVYFQVLALTGQFEPAMN 512
YG ++ + PV+YF +L L G +E A+N
Sbjct: 462 YGSDYFTNNGSNPVMYFFLLMLCGLYERAIN 492
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +1
Query: 25 VIDERPLWPMVYYCLRSGDPNAALHCLRKAGRD-----HEEFIAALEEYIRNPEKPLSDK 189
+I + P+W ++Y LR G A+ + RD E+F + Y + P L +
Sbjct: 320 IIQDVPIWAFIFYLLRCGFLKEAVD-FTEENRDLFEKVAEKFPFYINAYAKAPNGILPRQ 378
Query: 190 LQTAI--NFQYRIQVRNSTDPYK 252
L++ + F I+++ S+DPYK
Sbjct: 379 LRSQLFSEFNQTIRLQESSDPYK 401
>UniRef50_Q6FKS2 Cluster: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein; n=1;
Candida glabrata|Rep: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 846
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHYE-VARTADDYLWLKLSFIRTRSANET---ESFSYSDLQKLILEE 422
AVY +IG CD++++ V + +D+LWL L+ ++ +N E +S +DLQ +
Sbjct: 404 AVYKIIGRCDLTNKTIPAVTLSVEDWLWLNLTLVKENCSNTDPIYEKYSLNDLQATV-TT 462
Query: 423 YGETHYHAYEKPVVYFQVLALTGQFEPAMNSSREYQDI 536
+GE + P YFQVL +G FE A+ + + ++
Sbjct: 463 FGEKRF-----PNNYFQVLLYSGLFERALEEAYKVNEL 495
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 25 VIDERPLWPMVYYCLRSGDPNAALH-CLRKA---GRDHEEFIAALEEYIRNPEKPLSDKL 192
+++ +P+W +++Y LR+G + AL + A + F+ + Y +P+ L L
Sbjct: 321 IVNGKPIWAVIFYLLRAGLIDDALEVAISNASSFNKIENSFVKYFKAYASSPDNELPPDL 380
Query: 193 QTAINFQYRIQVRNSTD 243
+ ++ +Y ++ S D
Sbjct: 381 SSDLHTEYNQYIKTSID 397
>UniRef50_P34077 Cluster: Nucleoporin NIC96; n=7;
Saccharomycetaceae|Rep: Nucleoporin NIC96 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 839
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHYE-VARTADDYLWLKLSFIRTRSANET---ESFSYSDLQKLILEE 422
AVY +IG CD+S ++ V + +D+LW+ L I+ + A E +S D Q +I+
Sbjct: 410 AVYKLIGRCDLSRKNIPAVTLSIEDWLWMHLMLIKEKDAENDPVYERYSLEDFQNIII-S 468
Query: 423 YGETHYHAYEKPVVYFQVLALTGQFEPAMNSSREYQDI 536
YG + + Y Y Q L L+G + A++ + + ++
Sbjct: 469 YGPSRFSNY-----YLQTLLLSGLYGLAIDYTYTFSEM 501
Score = 35.9 bits (79), Expect = 0.84
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +1
Query: 25 VIDERPLWPMVYYCLRSGDPNAALHCL--RKAG--RDHEEFIAALEEYIRNPEKPLSDKL 192
VI+ P+W +++Y LR+G AL L KA + + F+ + Y + + L +
Sbjct: 327 VINGVPIWALIFYLLRAGLIKEALQVLVENKANIKKVEQSFLTYFKAYASSKDHGLPVEY 386
Query: 193 QTAINFQYRIQVRNST--DPYK 252
T ++ +Y +++S DPY+
Sbjct: 387 STKLHTEYNQHIKSSLDGDPYR 408
>UniRef50_Q6FUM4 Cluster: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein; n=1;
Candida glabrata|Rep: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 840
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHY-EVARTADDYLWLKLSFIRTRSANETESFSY--SDLQKLILEEY 425
A+Y ++G CD+S +++ + + +D+LWL L + +S Y SDLQ LI+ Y
Sbjct: 408 ALYRIVGRCDLSRKNFSSITFSIEDWLWLHLCLVTNEPKKLEKSTQYCLSDLQNLIV-SY 466
Query: 426 GETHYHAYEKPVVYFQVLALTGQFEPA 506
G + Y ++L LTG +E A
Sbjct: 467 GSNKF-----ANSYLKILVLTGLYENA 488
>UniRef50_O14310 Cluster: Nucleoporin npp106; n=1;
Schizosaccharomyces pombe|Rep: Nucleoporin npp106 -
Schizosaccharomyces pombe (Fission yeast)
Length = 933
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 16 TDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEE----FIAALEEYIRNPEKPLS 183
T V+++ PLW +++Y +RSG +AAL + D E+ F Y +NP PL
Sbjct: 383 TVSVVNDVPLWVVLFYLMRSGQLDAALQFVNTYSDDFEKLGRSFPLYFYSYAKNPSLPLP 442
Query: 184 DKLQTAINFQY-RIQVRNSTDPYK 252
+L+ + +Y ++ DP+K
Sbjct: 443 KQLRDRLQAEYGQLMKYAPEDPFK 466
Score = 40.3 bits (90), Expect = 0.039
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHY-EVARTADDYLWLKLSFIRTRSANETES---------FSYSDLQ 404
A+Y ++G C+ EV T++DY+W++L F R + +S F+ L+
Sbjct: 468 AIYKLLGNCEPHRVSLPEVCVTSEDYMWIQLMFCRVNQNDVIDSNGGQSTNSLFNLYQLE 527
Query: 405 KLILEEYGETHYHAYEK-PVVYFQVLALTGQFEPAMNSSREYQDIKYTVFIWLLRY 569
K I+ +G +++ P YF L + G+FE A++ ++ T F + Y
Sbjct: 528 KKIV-AFGPRYFNPKNNTPTNYFLALLMCGEFERAISFLHTNYPVEATHFAVAMAY 582
>UniRef50_A6RPQ6 Cluster: Ribonuclease; n=3; Sclerotiniaceae|Rep:
Ribonuclease - Botryotinia fuckeliana B05.10
Length = 1493
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Frame = +1
Query: 25 VIDERPLWPMVYYCLRSG---DPNAALHCLRKAGR-DHEEFIAALEEYIRNPEKPLSDKL 192
++++ +W +V+Y LRSG + NA + R+A R F+ + EY +P++ L L
Sbjct: 934 IVNDDYVWAVVFYLLRSGHVEEANAYVQENREAFRVIDRSFMFYIAEYANSPDRKLGHDL 993
Query: 193 QTAINFQY----RIQVRNSTDPYKRQC 261
Q I +Y RI S DP++ C
Sbjct: 994 QNRIQSEYSQRNRISPEGSIDPFRMAC 1020
>UniRef50_Q9BKT9 Cluster: Nuclear pore complex protein protein 13,
isoform a; n=3; Caenorhabditis|Rep: Nuclear pore complex
protein protein 13, isoform a - Caenorhabditis elegans
Length = 787
Score = 40.7 bits (91), Expect = 0.030
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 DGVIDERPLWPMVYYCLRSGDPNAALHCLR--KAGRDHEEFIAALEEYIRNPEKPLSDKL 192
D ID P W + Y+C+R+GD +A L K+ +AAL ++ + L +L
Sbjct: 290 DDSIDGMPTWQVTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGK--LDSEL 347
Query: 193 QTAINFQYRIQVRNSTDPYKR 255
+ + ++R + ++ D YKR
Sbjct: 348 KKKLKVEWRHNLAHTKDKYKR 368
>UniRef50_Q4P7V0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 917
Score = 40.7 bits (91), Expect = 0.030
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Frame = +3
Query: 258 VYCVIGCCDVSDEHYEVARTA-DDYLWLKLSFIRTRSANETES-------FSYSDLQKLI 413
+Y +IG DV + + ++ ++LWL+LS +R + ++ F+ +DL +
Sbjct: 451 LYKLIGRIDVLKKFPTLLTSSIQNWLWLQLSMVRETYDEDADAQDSVRDRFTLADLGNKV 510
Query: 414 LEEYGETHYHAY-EKPVVYFQVLALTGQFEPAM 509
E++GE ++ +P+ YF++L L GQFE A+
Sbjct: 511 -EKFGEAYFDPKGNRPLFYFRLLLLCGQFEKAV 542
Score = 33.1 bits (72), Expect = 5.9
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 PLWPMVYYCLRSGDPNAALHCL----RKAGRDHEEFIAALEEYIRNPEKPLSDKLQTAIN 207
P+W +Y+ LR G AL C + F+A L+ ++ +P++ L L+
Sbjct: 371 PIWAELYFLLRIGRTKEALECASENENRIRSTDPSFLAYLKAWLDSPDRRLPRLLKDRFV 430
Query: 208 FQYRIQVRNST---DPYK 252
+Y + R DPYK
Sbjct: 431 AEYNSRFRTLPEVHDPYK 448
>UniRef50_Q55GW5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 979
Score = 39.5 bits (88), Expect = 0.068
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANE-TESFSYSDLQKL--ILEEY 425
+V+ ++ C D + +V + DY+W +L+FIR R E T + S L+ L ++
Sbjct: 527 SVFNLLSCNDPNSTKQQVITSIQDYIWWRLNFIRERITIEPTNDSAISLLESLQNDIKNS 586
Query: 426 GETHYHAYEKPVVYFQVLALTGQFEPAMNSSREY 527
E + + YE + FQ+L ++ QFE A+ S ++
Sbjct: 587 IEKNRNNYE-TLEIFQLLLVSLQFEDAIVSLYQF 619
>UniRef50_Q0V0C3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1132
Score = 39.5 bits (88), Expect = 0.068
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Frame = +3
Query: 213 IQNTSSEFYRSL*KAVYCVIGCCDVSDEHYE-VARTADDYLWLKLSFIRTRSANETESFS 389
+Q+ + YR+ A Y ++G CD+S + T DD++WL+ + R + E +
Sbjct: 639 LQSQVDDPYRT---ACYKIVGRCDLSRRSLNPIKETMDDWIWLQFNLAREGNRAEENAGE 695
Query: 390 YSDLQKL--ILEEYGETHYHAYEKPV----VYFQVLALTGQFEPAMNSSREYQDIKYTVF 551
L++L + + G+ H+ VYF + L G FE + + + F
Sbjct: 696 IWGLEELRSSIRDIGQKHFSEDADSAGGYGVYFYLTTLAGMFESGLGYLYNHNYVSTVHF 755
Query: 552 IWLLRY 569
L Y
Sbjct: 756 AIALDY 761
>UniRef50_Q38AQ7 Cluster: Nucleoporin interacting component (NUP93),
putative; n=4; Trypanosoma|Rep: Nucleoporin interacting
component (NUP93), putative - Trypanosoma brucei
Length = 883
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 EVARTADDYLWLKLSFIRTRSANETESF-SYSDLQKLILEE 422
+VAR+ +D LW++L + T AN +E S SD+Q+L+L++
Sbjct: 478 KVARSLEDTLWIRLFCLHTVDANNSEKIQSLSDMQRLLLDD 518
>UniRef50_O22224 Cluster: Uncharacterized protein At2g41620; n=5;
Magnoliophyta|Rep: Uncharacterized protein At2g41620 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 861
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Frame = +3
Query: 315 TADDYLWLKLSFIRTRSANETE--------SFSYSDLQKLILEEYGETHYHAYEK-PVVY 467
T +D+LW KLS IR + + +S DLQ L ++ ++Y K P+VY
Sbjct: 446 TIEDFLWFKLSCIRDVTGGSSSVVLNDGLAPYSLDDLQ-AYLNKFEPSYYTKNGKDPLVY 504
Query: 468 FQVLALTGQFEPA-MNSSREYQDIKYTV 548
VL L+ Q PA M+ S+E D Y +
Sbjct: 505 PYVLLLSVQLLPAIMHLSKEAGDGGYNI 532
>UniRef50_A2FFD2 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 239
Score = 35.1 bits (77), Expect = 1.5
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 285 VSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGETHYHAYEK--- 455
VS+E+YE D+L L++ + E + +Y +L L LE+ T ++ + K
Sbjct: 44 VSNENYETFYILMDFLTLRIDTTDEQQMKEESTAAYENLVTL-LEQAEPTAFNYFAKQWR 102
Query: 456 PVVYFQVLALTGQFEPAMN-SSREYQDIKYTVFI 554
P + ++ G E N S ++ IKYTVF+
Sbjct: 103 PHLVKWMIMHRGSNEATNNVSESHFRQIKYTVFL 136
>UniRef50_A5UMD4 Cluster: Putative uncharacterized protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Putative
uncharacterized protein - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 143
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 369 NETESFSYSDLQKLILEEY---GETHYHAYEKPVVYFQVLALTGQF-EPAMNSSREYQDI 536
N +S + KL E++ G +Y E V+ +VLA +G E +SR Y D
Sbjct: 77 NHNSKYSVRKVSKLCREKFKKLGLKNYQFKENNVLGGKVLASSGALGEDVSVASRNYGDY 136
Query: 537 KYTVFIW 557
YT++IW
Sbjct: 137 SYTLYIW 143
>UniRef50_Q4SNY8 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14542, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2038
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 602 HSSVCPACKRHVTQEPYEHRVLDILVFSRGIHSWLKLSSQSQHLKVHDR 456
H PAC R Q+ E + L+ SRG+ W+ L +S HL+V R
Sbjct: 1288 HIQFGPACNRDDVQQAVEECIPTELIESRGMTKWIHL-IRSAHLQVRQR 1335
>UniRef50_A0V7Z2 Cluster: Sensor protein; n=2; cellular organisms|Rep:
Sensor protein - Delftia acidovorans SPH-1
Length = 1287
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 91 ALHCLRKAGRDHEEFIAALEEYIRNPEKPLSDKLQ 195
A H L++A R +EF+A L +RNP P+S LQ
Sbjct: 911 AEHHLKEADRRKDEFLATLAHELRNPLAPISHGLQ 945
>UniRef50_Q12C20 Cluster: ABC transporter related; n=5;
Bacteria|Rep: ABC transporter related - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 678
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -2
Query: 614 VELEHSSVCPACKRHVTQEPYEHRVLDILVFSRGIHSWLKLSSQSQHLKVHDRFFISMIM 435
++L + +CP+ + EP H LD LV+ + +WLK + + HDR F+ +
Sbjct: 158 LQLARALMCPS-DLLLLDEPTNHLDLDALVW---LEAWLKRYQGTMLVISHDREFLDAVT 213
Query: 434 RFTIFLQN 411
T+ ++N
Sbjct: 214 DVTVHIEN 221
>UniRef50_Q9C2J7 Cluster: Related to nucleoporin-interacting protein
NIC96; n=5; Sordariomycetes|Rep: Related to
nucleoporin-interacting protein NIC96 - Neurospora
crassa
Length = 1103
Score = 33.1 bits (72), Expect = 5.9
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 255 AVYCVIGCCDVSDEHYEVART-ADDYLWLKLSFIRTRSANET----ESFSYSDLQKLILE 419
A Y +IG CDVS+ + T +D++WL+ + R SA E ES+ +L+ I +
Sbjct: 626 ACYKIIGRCDVSNRSLDNLNTDVNDWIWLQFNLAR-ESAKELEIAGESYGLPELRASI-K 683
Query: 420 EYGETHY 440
E G H+
Sbjct: 684 EIGLKHF 690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,214,898
Number of Sequences: 1657284
Number of extensions: 12765786
Number of successful extensions: 34211
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 33221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34197
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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