Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00038
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q675W7 Cluster: Cullin; n=1; Oikopleura dioica|Rep: Cul...    35   1.8  
UniRef50_Q97EZ9 Cluster: PTS system enzyme IIC component; n=5; F...    34   4.3  
UniRef50_A4S9D1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.6  
UniRef50_UPI000049A581 Cluster: protein kinase; n=1; Entamoeba h...    33   7.5  
UniRef50_A7SYG3 Cluster: Predicted protein; n=8; Nematostella ve...    33   9.9  

>UniRef50_Q675W7 Cluster: Cullin; n=1; Oikopleura dioica|Rep:
          Cullin - Oikopleura dioica (Tunicate)
          Length = 770

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 5  HRVYFHYLQQHKVYIRLYYHHYSYC 79
          + V+FH+   HK YI LY H Y+YC
Sbjct: 24 NNVFFHHGMGHKRYIELYTHVYNYC 48


>UniRef50_Q97EZ9 Cluster: PTS system enzyme IIC component; n=5;
           Firmicutes|Rep: PTS system enzyme IIC component -
           Clostridium acetobutylicum
          Length = 470

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -1

Query: 692 NMSGTIQTHIWHQTKITSFTLETKDCGWLFMEIITLRFIHIFFFNYMILLYNKM*VSLCY 513
           N SG +Q  +    K T   L   D GW  +  IT   ++  FF +++++ N + ++L  
Sbjct: 66  NFSGALQAFV----KSTGINLSITDLGWAPVATITWGSMYTLFFLFILVIVNVIMLALNK 121

Query: 512 SYTNDVSSL*PT*HP--CGII 456
           + T DV  +    HP  CGI+
Sbjct: 122 TNTLDV-DIFDVWHPAFCGIL 141


>UniRef50_A4S9D1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 482

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 695 KNMSGTIQTHIWHQTKITSFTLETKDCGW 609
           KNM   I+  +WHQTKI +F +E  +  W
Sbjct: 447 KNMMHQIKQGLWHQTKIYNFAVENYEKSW 475


>UniRef50_UPI000049A581 Cluster: protein kinase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 1093

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 20/87 (22%), Positives = 40/87 (45%)
 Frame = -1

Query: 746 LFL*KFVHLIYIAHCTIKNMSGTIQTHIWHQTKITSFTLETKDCGWLFMEIITLRFIHIF 567
           L+  K +H  +I+HC + + S   +   W++  IT    E     W+ + II +  I + 
Sbjct: 606 LYQGKCIHYSFISHCKMASNSICSKCSFWYKPTITGIECEINIKWWIIVIIIIMILIGMI 665

Query: 566 FFNYMILLYNKM*VSLCYSYTNDVSSL 486
               +I+LY  + +++C     +   L
Sbjct: 666 II--IIILYIIL-INICLKRNQEYQPL 689


>UniRef50_A7SYG3 Cluster: Predicted protein; n=8; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 462

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -1

Query: 734 KFVHLIYIAHCTIKNMSGTIQTHIWHQTKITSFTLETKDCGW-LFMEIITLRFIHIFFF 561
           ++V++I +     + MSG +Q   W    I SFT       W + +  +TL F+  FFF
Sbjct: 186 QYVYVIELVGPKARTMSGKVQDFFWDLGDILSFTCAYFIREWRMLILCVTLFFVPFFFF 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,879,153
Number of Sequences: 1657284
Number of extensions: 13217358
Number of successful extensions: 28715
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28661
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)