Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0265.Seq
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6RYS1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  
UniRef50_Q6BQR8 Cluster: DNA polymerase epsilon subunit B; n=2; ...    33   8.4  

>UniRef50_A6RYS1 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 548

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 527 SYIREPASKXSTQNKSHSTXIRRFTCGYV 613
           SYIREP S+ ST+N+ HS    + T  YV
Sbjct: 171 SYIREPPSESSTENEKHSKKQAKKTIDYV 199


>UniRef50_Q6BQR8 Cluster: DNA polymerase epsilon subunit B; n=2;
           Saccharomycetaceae|Rep: DNA polymerase epsilon subunit B
           - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 669

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 435 NANVNHLYRSFKLLSYIIKDNIRFSCPSFNSHIYVSRQAKXLHKTNRIPL 584
           N+NV++    + L+S  +  N  F  PSF+S   +S+     +KTN I L
Sbjct: 176 NSNVDYFNNRYHLISDRLSRNENFQKPSFSSISSISKSLSHNNKTNEITL 225


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,839,706
Number of Sequences: 1657284
Number of extensions: 12860577
Number of successful extensions: 20612
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20609
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)