Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0242.Seq
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 149 6e-35
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 136 5e-31
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 136 8e-31
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 125 1e-27
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 121 2e-26
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 120 3e-26
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 96 8e-19
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 92 1e-17
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 86 8e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 75 3e-12
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 3e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 69 2e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 68 2e-10
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 68 2e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 67 4e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 64 4e-09
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 64 5e-09
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 63 7e-09
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 63 7e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 63 9e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 2e-08
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 62 2e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 61 3e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 60 6e-08
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 8e-08
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 6e-07
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 56 8e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 52 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 51 4e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 4e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 49 1e-04
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 3e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 44 0.003
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.006
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.006
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 43 0.008
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.008
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.010
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.031
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.031
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.39
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.39
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.39
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.51
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.51
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.51
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.67
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.2
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.2
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.6
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.1
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.7
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.6
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.3
UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1; n... 33 8.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 149 bits (362), Expect = 6e-35
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAI
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAI 155
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLS++PVRRGYWG
Sbjct: 156 ILAKLSIVPVRRGYWG 171
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 95
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 136 bits (330), Expect = 5e-31
Identities = 65/76 (85%), Positives = 68/76 (89%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGAI
Sbjct: 36 FFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAI 95
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLS++PV RGYWG
Sbjct: 96 ILAKLSIVPVCRGYWG 111
Score = 54.0 bits (124), Expect = 4e-06
Identities = 37/121 (30%), Positives = 51/121 (42%)
Frame = +2
Query: 149 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP*MMRFLRSCLYRNKHVPDS 328
+PVTKLG L+ + KI LE IYLFSLPIKE EIID L+ + +
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 329 AHVSRHLLPLATTTVILVWVXSAARKSPLPFEALLSLLSCQFYQSEEGTGGNKIXKPHNR 508
+ +P+ + +++ + L G GNKI KPH
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 509 P 511
P
Sbjct: 121 P 121
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 136 bits (328), Expect = 8e-31
Identities = 59/76 (77%), Positives = 72/76 (94%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAI
Sbjct: 70 YFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAI 128
Query: 433 ILAKLSVLPVRRGYWG 480
I+ KLS++P+RRGYWG
Sbjct: 129 IMGKLSIMPIRRGYWG 144
Score = 70.1 bits (164), Expect = 6e-11
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVD 69
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 125 bits (301), Expect = 1e-27
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 457 PVRRGYWG 480
P+R+GYWG
Sbjct: 108 PLRQGYWG 115
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 121 bits (292), Expect = 2e-26
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 3/95 (3%)
Frame = +1
Query: 205 EHLLVF---FTNQRIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH 375
EH+ +F +I +H F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGH
Sbjct: 69 EHIFLFSLPIKEHQIVEH--FIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGH 126
Query: 376 IGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 480
IGLGVK KEVA +I+G++ILAKL+++PVRRGYWG
Sbjct: 127 IGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWG 161
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/131 (27%), Positives = 60/131 (45%)
Frame = +2
Query: 131 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP*MMRFLRSCLYRN 310
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ ++ C +
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 311 KHVPDSAHVSRHLLPLATTTVILVWVXSAARKSPLPFEALLSLLSCQFYQSEEGTGGNKI 490
+ + + + + A ++ + + L G G+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 491 XKPHNRPLQGH 523
+PH P + H
Sbjct: 165 GEPHTIPTKVH 175
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 120 bits (290), Expect = 3e-26
Identities = 53/72 (73%), Positives = 62/72 (86%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AK
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAK 133
Query: 445 LSVLPVRRGYWG 480
LSV+P+RRGYWG
Sbjct: 134 LSVIPIRRGYWG 145
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +2
Query: 134 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDS 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDT 71
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 96.3 bits (229), Expect = 8e-19
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +1
Query: 262 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI A
Sbjct: 60 GNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARA 119
Query: 442 KLSVLPVRRGYW 477
K ++ PVR G W
Sbjct: 120 KCAIRPVRLGLW 131
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVD 56
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +1
Query: 328 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 480
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWG
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWG 111
Score = 33.5 bits (73), Expect = 6.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 134 DQKEWVPVTKLGRLVREGKI 193
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 86.2 bits (204), Expect = 8e-16
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 384
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 71 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 70
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 381
FFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 24 FFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 188 KIDKLESIYLFSLPIKEFEIID 253
KI LE IYLFSLPIKE EIID
Sbjct: 2 KIKSLEEIYLFSLPIKESEIID 23
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 71.3 bits (167), Expect = 3e-11
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = -3
Query: 510 GRLCGFXILLPPVPSSDW*N*QLSKDNSASNGSGDFLAALXTQTNMTVVVANGNKCLETC 331
G GF L+ PV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 330 ALSGTCLFLYRHDLKNLIIQGRAEEE 253
L+GT L L HDL++ ++Q A+EE
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEE 106
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 253 INDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 128
I+DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 107 IDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/111 (32%), Positives = 65/111 (58%)
Frame = +1
Query: 217 VFFTNQRIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 396
+FF N ++ + G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKLVN--ILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 397 SKEVATAIRGAIILAKLSVLPVRRGYWG*QDXKATQPSFARSPAXVGSVKI 549
S + I+ A+ AKL++ +RRGYW ++ K + ++ GSV +
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKY-KTSGKAGSVVV 199
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/69 (46%), Positives = 49/69 (71%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AK
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAK 114
Query: 445 LSVLPVRRG 471
LS++ VR G
Sbjct: 115 LSLIKVRVG 123
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDS 256
K + + W P T++GR+V+EG I + I LP+ E EI+D+
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDA 52
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 95
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 342
FFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AK
Sbjct: 31 PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAK 90
Query: 445 LSVLPVRRG 471
L+++PV RG
Sbjct: 91 LNMIPVMRG 99
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +1
Query: 235 RIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 414
+I DH FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 96 QIVDH--FL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQG 152
Query: 415 AIR 423
AI+
Sbjct: 153 AIQ 155
Score = 62.1 bits (144), Expect = 2e-08
Identities = 25/39 (64%), Positives = 35/39 (89%)
Frame = +2
Query: 137 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVD 99
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 304 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 453
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 454 LPVRRG 471
+ ++RG
Sbjct: 122 IEIKRG 127
Score = 40.7 bits (91), Expect = 0.041
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 143 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
EW P TKLG +V+EG+I + I+ IKE EIID
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIID 51
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = -3
Query: 477 PVPSSDW*N*QLSKDNSASNGSGDFLAALXTQTNMTVVVANGNKCLETCALSGTCLFLYR 298
PV SSDW N QL D++ S+G+ +FL+ L TQT++TV V N + LE+ +L+ + L L R
Sbjct: 113 PVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDR 172
Query: 297 HDLKNLIIQ 271
D+ N I+Q
Sbjct: 173 LDVHNFILQ 181
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 63.3 bits (147), Expect = 7e-09
Identities = 39/75 (52%), Positives = 47/75 (62%)
Frame = +1
Query: 256 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 435
FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+ II
Sbjct: 85 FLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTIQRVII 135
Query: 436 LAKLSVLPVRRGYWG 480
L KL ++PV RGY G
Sbjct: 136 LTKLPIVPVWRGYCG 150
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 152 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
P +KLG LV++ +I L IYLFSLPIKE EIID
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIID 83
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK
Sbjct: 52 PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAK 111
Query: 445 LSVLPVRRG 471
++++PVRRG
Sbjct: 112 MNIIPVRRG 120
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 140 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVD 48
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 62.9 bits (146), Expect = 9e-09
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AK
Sbjct: 97 PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAK 156
Query: 445 LSVLPVRRGYWG*QDXKATQPSFAR-SPAXVGSVKI 549
L+++ V RG +D S R + GSV +
Sbjct: 157 LNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTV 192
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W P T+LGR V+ G I +E LP+KE EI+D
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVD 93
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 445 LSVLPVRRG 471
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +1
Query: 256 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 435
+L P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 436 LAKLSVLPVRRG 471
AKL+++ ++RG
Sbjct: 101 NAKLNIIEIKRG 112
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 140 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+EW P T+LGRLV G+I + LP+KE++I+D
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVD 40
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIID
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIID 95
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 342
FFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 96 FFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +1
Query: 259 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 438
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 439 AKLSVLPVRRG 471
AKL+++ V RG
Sbjct: 104 AKLNIIDVSRG 114
Score = 39.5 bits (88), Expect = 0.096
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W P T+LG+ V EG+ID ++ LP+KE E++D
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVD 42
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
F LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 157 FLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTN 216
Query: 433 ILAKLSV 453
+L+ + V
Sbjct: 217 VLSIILV 223
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 176 VREGKIDKLESIYLFSLPIKEFEIID 253
V++ K+ L+ +YLFSLPIKEFE+ D
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTD 156
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +1
Query: 286 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 465
++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAIIL + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 466 RGYWG 480
G+ G
Sbjct: 67 GGWSG 71
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 235
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 445 LSVLPVRRG 471
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 262 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 442 KLSVL--PVRRGY 474
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 56.4 bits (130), Expect = 8e-07
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 28 FFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSS 85
Query: 433 ILAKL-SVLPVRRGYWG*QDXKATQP 507
+ L S LP R Y G K T P
Sbjct: 86 WSSFLSSCLP--RDYCGNNIRKPTYP 109
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 54.4 bits (125), Expect = 3e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVD 70
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 451 VLPV 462
++ V
Sbjct: 72 LISV 75
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +1
Query: 298 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 477
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 478 G 480
G
Sbjct: 148 G 148
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 137 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP 271
+ +W+P+TKLG LV+E KI LE IY FSL + + S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 268 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 448 SVLPVRR 468
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 420
FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 95 FFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 304 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 471
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 140 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+EW P TKLGRLV+EGKI ++ I I+E EI+D
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVD 42
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 265 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 445 LSVLPV 462
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
F L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+ I
Sbjct: 23 FLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRTI 82
Query: 433 IL 438
IL
Sbjct: 83 IL 84
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 262 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A++ A
Sbjct: 510 GENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDA 569
Query: 442 KLSVLPV 462
K SV+ V
Sbjct: 570 KKSVVRV 576
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 451 VLPVR 465
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 457 PV 462
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 457 PV 462
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 157 HQTRPSCSRRKNRQTREHLLVFFT--NQRIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQR 330
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 331 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 462
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 48.0 bits (109), Expect = 3e-04
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 152 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSAR 268
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D +R
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLSR 74
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 384
L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 457 --PVRRG 471
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 457 PV 462
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 429
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 457 PV 462
V
Sbjct: 246 TV 247
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +1
Query: 229 NQRIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 408
N+R +H G L D V+ I V K + G+ F A V +GD NG +G+G S+EV
Sbjct: 35 NRREENH----GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREV 90
Query: 409 ATAIRGAIILAKLSVLPVRR 468
AI + AK + V R
Sbjct: 91 PAAIAKGQLDAKKHMFSVPR 110
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 262 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 442 KLSVL--PVRRG 471
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -3
Query: 252 SMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 133
SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 14 SMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 450
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 451 VLPVRRG 471
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 453
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 454 LPV 462
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 457 PV 462
V
Sbjct: 128 RV 129
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 43.2 bits (97), Expect = 0.008
Identities = 32/76 (42%), Positives = 38/76 (50%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA + AI
Sbjct: 55 FFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAI 108
Query: 433 ILAKLSVLPVRRGYWG 480
L + + GY G
Sbjct: 109 TLLSF-LFSTQTGYKG 123
Score = 34.3 bits (75), Expect = 3.6
Identities = 37/128 (28%), Positives = 55/128 (42%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP*MMRFLRSCLYR 307
K + K WV + LG LV+E KI LES FS +II+ LR+ L +
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 308 NKHVPDSAHVSRHLLPLATTTVILVWVXSAARKSPLPFEALLSLLSCQFYQSEEGTGGNK 487
N+ + TT V + +++ + ++LLS F ++ G GNK
Sbjct: 73 NQRTRIKVFFFLTIRSPMTTLV------NCSKEVGTAAQRAITLLSFLF-STQTGYKGNK 125
Query: 488 IXKPHNRP 511
I PH P
Sbjct: 126 IGNPHTIP 133
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 451 VLPV 462
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 457 PV 462
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.031
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 457 PV 462
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.39
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 468
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.39
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 423
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.39
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 451 VLPVRR 468
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 432 NSASNGSGDFLAALXTQTNMTVVVANGNKCLET 334
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.1 bits (82), Expect = 0.51
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 136 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIRDH*FFLGPS--LNDEVLKIMPVQK 309
P+ G+ + T S KN + ++ TN + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 310 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 462
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 423
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 451 VLPV 462
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 423
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 283 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 462
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 468
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 35.1 bits (77), Expect = 2.1
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +1
Query: 208 HLLVFFTNQRIRDH*FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
++ + N ++ + L ++ +++++I + + G+ R+K + +G+ G IGLG
Sbjct: 77 YIYKYNNNIKLNNSIIKLNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLG 136
Query: 388 VKCSKEVATAIRGAIILAKLSVL 456
V SK + I AII AK+ L
Sbjct: 137 V--SKNI--NINKAIISAKIKAL 155
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 268 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 448 SVLPVRR 468
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 420
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 268 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 448 SVLPVRR 468
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 283 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 429
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1;
n=21; Eumetazoa|Rep: Polycomb group RING finger protein
1 - Homo sapiens (Human)
Length = 247
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -1
Query: 155 QEPTLS--GLPCRAHDHGRDHYRVHEDRHGLXLHRVIRXRRENRHV 24
+EP LS GLP + DH + HY ++++ L L R+ + +N+ V
Sbjct: 129 EEPALSNLGLPFSSFDHSKAHYYRYDEQLNLCLERLSSGKDKNKSV 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,345,159
Number of Sequences: 1657284
Number of extensions: 12639786
Number of successful extensions: 30721
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 29126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30607
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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