Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30300.Seq
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    37   0.24 
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    36   0.56 
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    36   0.56 
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  

>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +3

Query: 9  AALELXDPPGCRNSARAR 62
          AALEL DPPGCRNSAR R
Sbjct: 8  AALELVDPPGCRNSARDR 25


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +3

Query: 9  AALELXDPPGCRNSAR 56
          AALEL DPPGCRNSAR
Sbjct: 9  AALELVDPPGCRNSAR 24


>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +3

Query: 9  AALELXDPPGCRNSAR 56
          AALEL DPPGCRNSAR
Sbjct: 9  AALELVDPPGCRNSAR 24


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +3

Query: 9  AALELXDPPGCRNS 50
          AALEL DPPGCRNS
Sbjct: 15 AALELVDPPGCRNS 28


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,875,663
Number of Sequences: 1657284
Number of extensions: 4014724
Number of successful extensions: 4617
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4617
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)