Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30263.Seq
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23WN4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_UPI0000E467F8 Cluster: PREDICTED: similar to Cyp2d6-A-p... 37 0.63
UniRef50_Q7Q8X9 Cluster: ENSANGP00000020522; n=3; Endopterygota|... 37 0.63
UniRef50_Q8F6Q6 Cluster: Probable transcription elongation; n=4;... 36 0.84
UniRef50_Q15545 Cluster: Transcription initiation factor TFIID s... 36 1.1
UniRef50_Q176B1 Cluster: TFIID subunit TAFII55, putative; n=1; A... 36 1.5
UniRef50_A5TT85 Cluster: Possible M23B family beta-lytic metallo... 35 1.9
UniRef50_UPI0000F2C65F Cluster: PREDICTED: similar to KIAA0947 p... 35 2.6
UniRef50_Q5V1P9 Cluster: Chromosome segregation protein; n=5; Ha... 35 2.6
UniRef50_A2FD36 Cluster: Viral A-type inclusion protein, putativ... 34 3.4
UniRef50_A2RV44 Cluster: Zgc:158846 protein; n=3; Danio rerio|Re... 34 4.5
UniRef50_A6EPN3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A3XLG9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q234R7 Cluster: Viral A-type inclusion protein repeat c... 34 4.5
UniRef50_Q48JF6 Cluster: Cointegrate resolution protein T; n=5; ... 33 5.9
UniRef50_A2E4A2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q66GS9 Cluster: Centrosomal protein of 135 kDa; n=33; D... 33 7.8
>UniRef50_Q23WN4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 298
Score = 37.1 bits (82), Expect = 0.48
Identities = 21/65 (32%), Positives = 39/65 (60%)
Frame = -1
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRN 21
++Q+ K I+D+E+ ++ + LL+ QT+LSK+Q + TI K D I+ ++ RN
Sbjct: 98 SQQKLVKKQIQDEEEELQKQKKQLLEKQTELSKVQ-KEYTINKRDLDEKIDDLQVKIDRN 156
Query: 20 ENVLD 6
+ +D
Sbjct: 157 QEKID 161
>UniRef50_UPI0000E467F8 Cluster: PREDICTED: similar to Cyp2d6-A-prov
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Cyp2d6-A-prov
protein, partial - Strongylocentrotus purpuratus
Length = 613
Score = 36.7 bits (81), Expect = 0.63
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = -1
Query: 182 KLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNEN 15
KL +E +EK I+ LE + + + KL+ E+ SR + I+ IPES NEN
Sbjct: 466 KLDLEGQEKEIQSLEKKINHLNSMVRKLEMVNEEAEQYSRRNCLRIYGIPESANEN 521
>UniRef50_Q7Q8X9 Cluster: ENSANGP00000020522; n=3;
Endopterygota|Rep: ENSANGP00000020522 - Anopheles
gambiae str. PEST
Length = 286
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 508 KTNEELEYPAELESQFILKLPEHPAKILRGLLKSG-GNLKNR 630
K + + + AELE+Q I+++P+ PA LR ++SG NLK+R
Sbjct: 7 KQDSKKDDGAELETQIIMRMPKEPAAALREAIQSGANNLKDR 48
>UniRef50_Q8F6Q6 Cluster: Probable transcription elongation; n=4;
Leptospira|Rep: Probable transcription elongation -
Leptospira interrogans
Length = 212
Score = 36.3 bits (80), Expect = 0.84
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 221 STTDFITAEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIE 75
S + + AE KLA+E+KEK + L L KT +L+ L+ R +E
Sbjct: 33 SENETLRAENDQMKLAMEEKEKELSSLREQLQKTTNELNDLKERERKLE 81
>UniRef50_Q15545 Cluster: Transcription initiation factor TFIID
subunit 7 (Transcription initiation factor TFIID 55 kDa
subunit) (TAF(II)55); n=30; Euteleostomi|Rep:
Transcription initiation factor TFIID subunit 7
(Transcription initiation factor TFIID 55 kDa subunit)
(TAF(II)55) - Homo sapiens (Human)
Length = 349
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 502 MNKTNEELEYPAELESQFILKLPEHPAKILRGLLKSGG-NLKNR 630
M+K+ ++ P ELESQFIL+LP A +R ++SG NLK+R
Sbjct: 1 MSKSKDDA--PHELESQFILRLPPEYASTVRRAVQSGHVNLKDR 42
>UniRef50_Q176B1 Cluster: TFIID subunit TAFII55, putative; n=1;
Aedes aegypti|Rep: TFIID subunit TAFII55, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 358
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/32 (50%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +1
Query: 538 ELESQFILKLPEHPAKILRGLLKSG-GNLKNR 630
ELE+Q I+++P PA+ILR +++G NLK+R
Sbjct: 18 ELETQIIMRMPVEPARILREAIQTGANNLKDR 49
>UniRef50_A5TT85 Cluster: Possible M23B family beta-lytic
metallopeptidase; n=3; Fusobacterium nucleatum|Rep:
Possible M23B family beta-lytic metallopeptidase -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 411
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = -1
Query: 176 AIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNE 18
+++D KR+K ++ + K T + + + T+ +EK+ ++L EI ++ R E
Sbjct: 27 SVKDMNKRLKNIDKEIEKKNTRIKAIDTETSKLEKMIKELEEEIKKLEHEREE 79
>UniRef50_UPI0000F2C65F Cluster: PREDICTED: similar to KIAA0947
protein; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to KIAA0947 protein - Monodelphis domestica
Length = 2621
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 161 EKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNENVL 9
E ++K LE A +K DL +L+ T+EK + ++ E P+ N+ VL
Sbjct: 439 EAKVKKLEEAAVKHTEDLKQLKIEKKTLEKELKKTQEKLEEFPKQNNKKVL 489
>UniRef50_Q5V1P9 Cluster: Chromosome segregation protein; n=5;
Halobacteriaceae|Rep: Chromosome segregation protein -
Haloarcula marismortui (Halobacterium marismortui)
Length = 1195
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 182 KLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEI 36
+ AIE+ E I LEA + QT+L K + ATI ++ DL E E+
Sbjct: 449 RAAIEEAEAEIPDLEADIEDLQTELEKAKQNKATIGEVVDDLRAEKREL 497
>UniRef50_A2FD36 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type
inclusion protein, putative - Trichomonas vaginalis G3
Length = 3977
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -1
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNE 18
E+ D L E+K K I L++ KT D+ KLQ + +EK + L E + N+
Sbjct: 673 EKSDLSLENENKRKEIDELKSLNNKTNNDIEKLQLQIQELEKSNEQLQKEKEVLSSENNQ 732
>UniRef50_A2RV44 Cluster: Zgc:158846 protein; n=3; Danio rerio|Rep:
Zgc:158846 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 486
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AE+R +LA++D R++ LEAALL+ + D+++ ++ I L+IEI
Sbjct: 323 AEERG-ELAVKDARLRLQELEAALLRAKQDMARQVREYQSLMNIKLALDIEI 373
>UniRef50_A6EPN3 Cluster: Putative uncharacterized protein; n=1;
unidentified eubacterium SCB49|Rep: Putative
uncharacterized protein - unidentified eubacterium SCB49
Length = 240
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = -1
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNE 18
E++ + A ++KEK +K +E A K + + ++ A EK+ + LN ++ ++ N+
Sbjct: 135 EEKKLEKAEKEKEKELKKIEKAEKKAEKERKAIEKEVAKAEKLEKKLNDAKEDLKKAENK 194
>UniRef50_A3XLG9 Cluster: Putative uncharacterized protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative
uncharacterized protein - Leeuwenhoekiella blandensis
MED217
Length = 454
Score = 33.9 bits (74), Expect = 4.5
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = -1
Query: 212 DFITAEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNI 51
DFI ++D+KLA+++ ++ + + ++T + K+ S + + +DL I
Sbjct: 124 DFIQTTKKDYKLALQEAQQNLNKINDLFGNSETKIEKINSLRERMSNLRKDLGI 177
>UniRef50_Q234R7 Cluster: Viral A-type inclusion protein repeat
containing protein; n=2; Eukaryota|Rep: Viral A-type
inclusion protein repeat containing protein - Tetrahymena
thermophila SB210
Length = 4039
Score = 33.9 bits (74), Expect = 4.5
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -1
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIE 48
EDK + I++ +A K + ++ +++ + I+K+S+D+N+E
Sbjct: 1666 EDKNQLIEYFQAQCEKQEEEIKQIKQKYEEIQKLSQDINLE 1706
>UniRef50_Q48JF6 Cluster: Cointegrate resolution protein T; n=5;
Pseudomonas|Rep: Cointegrate resolution protein T -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 336
Score = 33.5 bits (73), Expect = 5.9
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 203 TAEQRDFKLAIEDKEKRIKFLE---AALLKTQTDLSKLQSRTATIEKISRDLNIEIHE 39
T +Q+ +L E ++R + LE AALL+TQ DL Q+ A + + +RDL +H+
Sbjct: 103 TTQQQISELQ-EHAQQRNETLEQQAAALLRTQNDLQTAQTEHARLSQANRDLESRLHD 159
>UniRef50_A2E4A2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1022
Score = 33.1 bits (72), Expect = 7.8
Identities = 13/60 (21%), Positives = 34/60 (56%)
Frame = -1
Query: 194 QRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNEN 15
Q++ + + +++ K + ++ Q ++S L+ + A +EK + L +++EIPE + +
Sbjct: 760 QKEIQNVSQKFDQKEKKIYTSMANKQNEISSLRDKIANLEKANNSLQSKVNEIPEIKKSH 819
>UniRef50_Q66GS9 Cluster: Centrosomal protein of 135 kDa; n=33;
Deuterostomia|Rep: Centrosomal protein of 135 kDa - Homo
sapiens (Human)
Length = 1140
Score = 33.1 bits (72), Expect = 7.8
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -1
Query: 191 RDFKLAIEDKEKRIKFLEAALLKTQT-DLSKLQSRTATIEKISRDLNIEIHEIPESRNE 18
RD+ IE +E+ I+ L AL ++ D+ L+SR T EK+ LNI++ + ++ +
Sbjct: 228 RDYSKQIELREREIERLSVALDGGRSPDVLSLESRNKTNEKLIAHLNIQVDFLQQANKD 286
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,731,165
Number of Sequences: 1657284
Number of extensions: 12067237
Number of successful extensions: 30609
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30595
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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