Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30254.Seq
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 120 2e-26
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 113 2e-24
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 100 2e-20
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 100 2e-20
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 100 2e-20
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 100 4e-20
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 77 3e-13
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 54 3e-11
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 63 4e-09
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 62 1e-08
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 61 2e-08
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 54 1e-06
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 51 2e-05
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 49 7e-05
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 48 2e-04
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 47 3e-04
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.025
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 36 0.41
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 36 0.54
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 33 3.8
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 32 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 120 bits (289), Expect = 2e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 113 bits (273), Expect = 2e-24
Identities = 56/72 (77%), Positives = 58/72 (80%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV FLTVMMK GY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 184 IVVNLTGRLNKC 195
Score = 62.1 bits (144), Expect = 7e-09
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VIS RFDV + D+++W NLLP RQFG++ LTT G +DHEEARR
Sbjct: 197 VISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 100 bits (239), Expect = 2e-20
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MV MNVL ALK A G Q I CSK IV+FLTVMMK GYI EFEI+DDHRAGK
Sbjct: 99 MVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGK 158
Query: 290 IVVNLTGRLNKC 255
+VVNLTGRLNKC
Sbjct: 159 MVVNLTGRLNKC 170
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLP+RQFG++ LTT G MD EE R+
Sbjct: 172 VISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 100 bits (239), Expect = 2e-20
Identities = 49/65 (75%), Positives = 52/65 (80%)
Frame = -2
Query: 449 SXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNLTG 270
S ALK A RG QVLI CSKVIV+FL+VMMK GYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 269 RLNKC 255
RLNKC
Sbjct: 234 RLNKC 238
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VI+ RFDV D+E+W NL PS QFG++ LTTS G MDHEEAR+
Sbjct: 240 VINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 100 bits (239), Expect = 2e-20
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVR NVL+ ALK A RG QVL+ PCS+VI++FLTVM K GYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 290 IVVNLTGRLNKC 255
+VV LT RLNKC
Sbjct: 60 MVVYLTDRLNKC 71
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRF V + D+E+W NLLPS QFG++ LTTS G D EEARR
Sbjct: 73 VISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 99.5 bits (237), Expect = 4e-20
Identities = 48/72 (66%), Positives = 54/72 (75%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVR++VL+ LK A RG QV+I P SKVI+KFL VM K GYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 290 IVVNLTGRLNKC 255
IVV L GRLNKC
Sbjct: 61 IVVELNGRLNKC 72
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERWT-NLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + +IE WT LLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
M +N L+ AL R Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 290 IVVNLTGRLNKC 255
I+V L GR+NKC
Sbjct: 61 IIVQLLGRINKC 72
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 54.4 bits (125), Expect(2) = 3e-11
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2
Query: 338 GYIGEFEIVDDHRAGKIVVNLTGRLNKC 255
GYI EFE +DDHRAGKIVV L GR+NKC
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKC 134
Score = 35.9 bits (79), Expect(2) = 3e-11
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -2
Query: 422 AXXRGXXQVLIXPCSKVIVKFLTVMMK 342
A RG QVL+ P SKV++KFL VM K
Sbjct: 49 AEKRGKRQVLVRPVSKVVIKFLQVMQK 75
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
M ++ L+ AL + G +V I P SK+I + L VM K GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 290 IVVNLTGRLNK 258
V L GR+NK
Sbjct: 61 YRVQLLGRINK 71
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEA 127
I PRF V +++ E+W LP+ +FG L ++TS G M H+EA
Sbjct: 75 IKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = -2
Query: 455 VLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNL 276
+L+ AL+ A RG V + P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 275 TGRLNKC 255
GR+N C
Sbjct: 65 QGRVNDC 71
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = -1
Query: 240 RFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEA 127
R DV +IE++T LP+RQ+GY+ +TT G +DHEEA
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MV ++ L+ AL A G ++ P SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 290 IVVNLTGRLNKC 255
V L GR+NKC
Sbjct: 61 YSVTLVGRINKC 72
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEAR 124
I PR+ V ERW LP++ FG L LTTS G M EAR
Sbjct: 75 IKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = -2
Query: 461 MNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVV 282
++ LS A+ A G + I P SK+I L VM GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 281 NLTGRLNKC 255
L+G +N C
Sbjct: 63 ELSGNINDC 71
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEARR 121
I PRF + + E + LP+R FG L ++T+ G M ++AR+
Sbjct: 74 IRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = -2
Query: 422 AXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNLTGRLNKC 255
A RG QV P SK+ V+ L + K GYIGEFE V+D R GK V+L ++ KC
Sbjct: 19 ARRRGDCQVY--PTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKC 72
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEA 127
ISPRF V + W LPS G L +TT+ G M H EA
Sbjct: 75 ISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = -2
Query: 452 LSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNLT 273
L+ K A G Q+L+ ++ + FL M++ GYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 272 GRLNKC 255
GRLN+C
Sbjct: 65 GRLNRC 70
Score = 40.7 bits (91), Expect = 0.019
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEE 130
ISP + V + IE + T LLP+RQFG++ TS G +DH+E
Sbjct: 73 ISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = -2
Query: 443 ALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNLTGRL 264
AL A G + P S +I L V+ GY+ FE VDD +AGK V L G +
Sbjct: 27 ALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAI 86
Query: 263 NKC 255
N+C
Sbjct: 87 NEC 89
Score = 41.5 bits (93), Expect = 0.011
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEAR 124
+ PR+ ++ E+W LP+R +G L +TTS G M H EAR
Sbjct: 92 VKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -2
Query: 452 LSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVNLT 273
L+ + A G +V+I P S +I + L VM YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 272 GRLNKC 255
+N C
Sbjct: 66 DTINNC 71
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VI PR V ++IER+ + LP++ FG + LTT+ G M H EAR+
Sbjct: 73 VIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 40.3 bits (90), Expect = 0.025
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2
Query: 332 IGEFEIVDDHRAGKIVVNLTGRLNKCVS 249
IG+FE++DDHRAGKIV NL+ ++ + S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 36.3 bits (80), Expect = 0.41
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 362 FLTVMMKXGYIGEFEIVDDHRAGKIVVNLTGRLNK 258
F+TV MK G +FEIVD+ G+I V+L G LNK
Sbjct: 3 FVTVKMKTG---KFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 35.9 bits (79), Expect = 0.54
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -2
Query: 458 NVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGKIVVN 279
++++ L +G + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 278 LTGRLNK 258
L+ N+
Sbjct: 64 LSEYFNE 70
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 249 ISPRFDVPINDIERWTN-LLPSRQFGYLXLTTSGGXMDHEEAR 124
I PRF V +++E++ LP+ FG L L+TS G + + EA+
Sbjct: 74 IKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 33.1 bits (72), Expect = 3.8
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 386 PCSKVIVKFL--TVMMKXGYIGEFEIVDDHRAGKIVVNLTGRLNKCVSFHLVLMFPSTIL 213
P ++VI++ L ++M+K G + + + DD R K+ + +N C L + +P T+
Sbjct: 153 PSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLSSCYSSDVNACKKSRLDVAYPETLK 212
Query: 212 KDGLIC 195
+ +IC
Sbjct: 213 RIKVIC 218
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 31.9 bits (69), Expect = 8.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 410 GXXQVLIXPCSKVIVKFLTVMMKXGYIGEF 321
G +V+ PCSKV++ L ++++ GYI F
Sbjct: 20 GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,113,352
Number of Sequences: 1657284
Number of extensions: 5324356
Number of successful extensions: 8879
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8870
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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