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Last updated: 2022/09/19
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30119.Seq
         (448 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom...   155   3e-37
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo...   128   7e-29
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar...   120   1e-26
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom...   119   3e-26
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ...   107   1e-22
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ...   103   2e-21
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka...   101   9e-21
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ...    87   2e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31...    85   5e-16
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ...    85   9e-16
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=...    80   2e-14
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ...    71   2e-11
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ...    70   2e-11
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ...    60   2e-08
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ...    60   3e-08
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma...    54   1e-06
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom...    54   2e-06
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl...    52   4e-06
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ...    49   4e-05
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar...    49   4e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar...    48   1e-04
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya...    47   2e-04
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:...    46   4e-04
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;...    45   7e-04
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae...    44   0.002
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy...    43   0.003
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo...    42   0.005
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ...    40   0.019
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot...    38   0.13 
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf...    36   0.53 
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha...    35   0.70 
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh...    33   2.1  
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ...    33   2.8  
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel...    33   2.8  
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA...    33   3.7  
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo...    32   6.5  

>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
           Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
           virescens (Noctuid moth) (Owlet moth)
          Length = 124

 Score =  155 bits (377), Expect = 3e-37
 Identities = 72/78 (92%), Positives = 74/78 (94%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1   MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60

Query: 222 VDTRLNKFLWSRGSEMFP 275
           VDTRLNKFLWS+G    P
Sbjct: 61  VDTRLNKFLWSKGVRNVP 78



 Score = 72.9 bits (171), Expect = 3e-12
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
           NDDEDSAHKLFTLVTYVPVASIKGLQTENVDAS E
Sbjct: 90  NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124


>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
           Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
           (Human)
          Length = 125

 Score =  128 bits (308), Expect = 7e-29
 Identities = 57/78 (73%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
 Frame = +3

Query: 45  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 222 VDTRLNKFLWSRGSEMFP 275
           +DTRLNK +W++G    P
Sbjct: 64  IDTRLNKAVWAKGIRNVP 81



 Score = 50.4 bits (115), Expect = 2e-05
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
           Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
           melanogaster (Fruit fly)
          Length = 124

 Score =  120 bits (289), Expect = 1e-26
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 222 VDTRLNKFLWSRGSEMFP 275
           +DTRLNK +WS+G    P
Sbjct: 61  IDTRLNKHIWSKGIRSTP 78



 Score = 54.0 bits (124), Expect = 1e-06
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
           NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90  NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124


>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
           Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
           (Yellowfever mosquito)
          Length = 124

 Score =  119 bits (286), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1   MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60

Query: 222 VDTRLNKFLWSRG 260
           +DTRLNK LW RG
Sbjct: 61  IDTRLNKALWHRG 73



 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
           NDDEDS +KL+TLVTYVPV++ K LQTENV+++ +
Sbjct: 90  NDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124


>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
           protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein L31 - Canis familiaris
          Length = 130

 Score =  107 bits (256), Expect = 1e-22
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = +3

Query: 96  TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W++G    P
Sbjct: 60  TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119


>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 175

 Score =  103 bits (246), Expect = 2e-21
 Identities = 46/76 (60%), Positives = 60/76 (78%)
 Frame = +3

Query: 48  KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
           K +  +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+  FA+K MGT D+R+D
Sbjct: 55  KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114

Query: 228 TRLNKFLWSRGSEMFP 275
            +LN+ +W  G + FP
Sbjct: 115 PKLNQEVWKYGVKNFP 130


>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
           Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 119

 Score =  101 bits (241), Expect = 9e-21
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +3

Query: 60  ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 239
           E+KG+    EV+TREYT+NLH+RLH   FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3   EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 240 KFLWSRG 260
           K +WS+G
Sbjct: 61  KQIWSKG 67


>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
           protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to ribosomal protein L31 - Rattus norvegicus
          Length = 163

 Score = 87.0 bits (206), Expect = 2e-16
 Identities = 45/73 (61%), Positives = 55/73 (75%)
 Frame = +3

Query: 45  AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 224
           AK  G++KG SAINE+VTREYT+N+HKR+H VGFK  AP A+KEI KFA K MGTP+  +
Sbjct: 4   AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63

Query: 225 DTRLNKFLWSRGS 263
            T LN  L+ R S
Sbjct: 64  CT-LNS-LFHRSS 74


>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
           n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
           (RPL31C) - Arabidopsis thaliana
          Length = 85

 Score = 85.4 bits (202), Expect = 5e-16
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +3

Query: 60  ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
           E+KG+    EV+TREYT+NLH+RLH   FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3   EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56


>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
           protein L31, partial; n=1; Macaca mulatta|Rep:
           PREDICTED: similar to ribosomal protein L31, partial -
           Macaca mulatta
          Length = 129

 Score = 84.6 bits (200), Expect = 9e-16
 Identities = 40/77 (51%), Positives = 56/77 (72%)
 Frame = +3

Query: 93  VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMF 272
           VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W++G+   
Sbjct: 25  VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84

Query: 273 PPVSV*GFHEDVMMMKI 323
             V + GF E++M + I
Sbjct: 85  SWVPICGF-ENMMKLNI 100



 Score = 31.9 bits (69), Expect = 6.5
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 329 HKLFTLVTYVPVASIKGL 382
           HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118


>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
           Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
           L31, putative - Tetrahymena thermophila SB210
          Length = 111

 Score = 80.2 bits (189), Expect = 2e-14
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +3

Query: 108 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           TVNLHK+ H + FKK+APRAI+EI   A+K MGT D+R+DT LNKF+WS G    P
Sbjct: 12  TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIP 67


>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L31 - Entamoeba histolytica HM-1:IMSS
          Length = 150

 Score = 70.5 bits (165), Expect = 2e-11
 Identities = 36/76 (47%), Positives = 48/76 (63%)
 Frame = +3

Query: 33  KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 212
           K+   KP  E K K      +TRE T+++HK LH   FKKRAP+AIK IR  A K M T 
Sbjct: 28  KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85

Query: 213 DIRVDTRLNKFLWSRG 260
           +++ D  LN+F+WS+G
Sbjct: 86  NVKFDMGLNQFIWSQG 101



 Score = 35.5 bits (78), Expect = 0.53
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +2

Query: 317 EDSAHKLFTLVTYVPVASIKGLQTENVD 400
           E    K +TLV+YVPVAS KGL T+ V+
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVE 146


>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
           Apicomplexa|Rep: Ribosomal protein L31e, putative -
           Plasmodium yoelii yoelii
          Length = 142

 Score = 70.1 bits (164), Expect = 2e-11
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +3

Query: 96  TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRG 260
           T+  T+NL K  H V +K++APRAIKEI+  A K M T D+R+D +LNKF+WS+G
Sbjct: 39  TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKG 93



 Score = 33.9 bits (74), Expect = 1.6
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTE 391
           N+DEDS  +++TLV +V V S KGL  E
Sbjct: 110 NEDEDSKERMYTLVQHVMVDSYKGLVNE 137


>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
           protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
           ribosomal protein L31 - Canis familiaris
          Length = 175

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = +3

Query: 147 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           +K   RA+K+IRKFA K++GTPD+R+DTRLNK +W++G    P
Sbjct: 89  RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVP 131



 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
           N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 143 NEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173


>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
           Saccharomyces cerevisiae|Rep: Putative uncharacterized
           protein - Saccharomyces cerevisiae (Baker's yeast)
          Length = 77

 Score = 59.7 bits (138), Expect = 3e-08
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = -1

Query: 238 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVTT 89
           F   + R S VP+C  ANF ISL ALGA FL  TP + LCKL VYSRVTT
Sbjct: 28  FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVTT 77


>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
           Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
           major
          Length = 188

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 87  EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSE 266
           + V+ E T++L K L    F KRAP AIK I+ F  + M T D R+D  LN ++W +G +
Sbjct: 82  DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVK 141

Query: 267 MFP 275
             P
Sbjct: 142 GVP 144


>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
           Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
           (Red sea bream) (Chrysophrys major)
          Length = 91

 Score = 53.6 bits (123), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +3

Query: 165 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           A   IRKFA K+MGTPD+R+DTRLNK +WS+G    P
Sbjct: 11  APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVP 47



 Score = 52.4 bits (120), Expect = 4e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +2

Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
           N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 59  NEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89


>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
           ATCC 50803
          Length = 106

 Score = 52.4 bits (120), Expect = 4e-06
 Identities = 25/61 (40%), Positives = 35/61 (57%)
 Frame = +3

Query: 93  VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMF 272
           +  E+T+ L+K + G   KK AP AI+ IR   EK     D+R+D  +N F+WSRG    
Sbjct: 3   IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62

Query: 273 P 275
           P
Sbjct: 63  P 63


>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
           protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein L31 - Canis familiaris
          Length = 141

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 141 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRG 260
           GF++  P  +KEIRKFA K+MGTPD+ +D   NK + + G
Sbjct: 49  GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEG 88


>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
           Euryarchaeota|Rep: 50S ribosomal protein L31e -
           Methanococcus jannaschii
          Length = 87

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 24/63 (38%), Positives = 38/63 (60%)
 Frame = +3

Query: 99  REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFPP 278
           R YT+ L   ++     KRAPRAIK+I++F ++ M    +++D  LN+ +W RG +  PP
Sbjct: 9   RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQK-PP 67

Query: 279 VSV 287
             V
Sbjct: 68  ARV 70


>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
           theta|Rep: 60S ribosomal protein L31 - Guillardia theta
           (Cryptomonas phi)
          Length = 97

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 25/54 (46%), Positives = 32/54 (59%)
 Frame = +3

Query: 114 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           N+HKR+ G  F KR   AIKEI+KFA K     +IR++  LN  + S GS   P
Sbjct: 15  NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68


>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
           Euryarchaeota|Rep: 50S ribosomal protein L31e -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 93

 Score = 46.8 bits (106), Expect = 2e-04
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = +3

Query: 69  GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 242
           GK A + V  + YT+ L + +  V   KRA RA+KE+R F  + M T    +++D  +N+
Sbjct: 3   GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61

Query: 243 FLWSRGSEMFPPVSV 287
            LW +G E  PP+S+
Sbjct: 62  CLWEKGCEK-PPLSI 75


>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
           NEQ364 - Nanoarchaeum equitans
          Length = 79

 Score = 46.0 bits (104), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +3

Query: 102 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           EYTVNL K +      KR  +A+K +++F  +      +++   LNKF+W RG    P
Sbjct: 2   EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59


>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L31E - Ignicoccus hospitalis KIN4/I
          Length = 101

 Score = 45.2 bits (102), Expect = 7e-04
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSRGSEMFPP 278
           YT+NL +RL+      RA RA++ +R+F  +  G    D+++D  +N +LWS GS   PP
Sbjct: 10  YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWS-GSITKPP 67

Query: 279 VSV 287
             V
Sbjct: 68  ARV 70


>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
           Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
           Archaeoglobus fulgidus
          Length = 88

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = +3

Query: 90  VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSRGS 263
           VV R Y++ L  ++       RA +A K +RKF  + M     ++++DT +N+ +W RG+
Sbjct: 5   VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64

Query: 264 EMFPPVSV 287
           E  PP  +
Sbjct: 65  EK-PPTKI 71


>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
           pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
           pernix
          Length = 104

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 21/61 (34%), Positives = 35/61 (57%)
 Frame = +3

Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFPPVS 284
           Y VNL +R++     +RA RA++ +R+F  +     ++ +D  LN ++WSR  E  PP  
Sbjct: 9   YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREK-PPAR 66

Query: 285 V 287
           V
Sbjct: 67  V 67


>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
           Thermococcaceae|Rep: 50S ribosomal protein L31e -
           Pyrococcus furiosus
          Length = 95

 Score = 42.3 bits (95), Expect = 0.005
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = +3

Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           +TV + K    V   KRAPRA+K +R+F  +     ++ +D ++N+ +W RG E  P
Sbjct: 11  FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67


>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 93

 Score = 40.3 bits (90), Expect = 0.019
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 84  NEVVTREYTVNLHKRLHG 137
           +EVVTREYT+NLHKRLHG
Sbjct: 13  DEVVTREYTINLHKRLHG 30


>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
           Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
           symbiosum
          Length = 217

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +3

Query: 99  REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           R YT+ L K L      +RA RAI  I++FA   M   +IR+D  ++  +W RG +  P
Sbjct: 7   RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64


>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
           Desulfurococcales|Rep: 50S ribosomal protein L31e -
           Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
           F1)
          Length = 102

 Score = 35.5 bits (78), Expect = 0.53
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 93  VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSRGSEM 269
           +TR   V   KR++      RA RA++ IRK+  +     + I +D  +N+++WSR  E 
Sbjct: 7   ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66

Query: 270 FP 275
            P
Sbjct: 67  PP 68


>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
           Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
           - Encephalitozoon cuniculi
          Length = 111

 Score = 35.1 bits (77), Expect = 0.70
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 75  SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 251
           S I E  T E TVNL +    + + K+A + ++ +++  +K       + V   LN FL+
Sbjct: 3   SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62

Query: 252 SRGSEMFP 275
           SRG +  P
Sbjct: 63  SRGIKKIP 70


>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
           genome shotgun sequence; n=9; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_24,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 372

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 147 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
           KKR  +    +   A K M T D+R+D  LN+ +W+RG    P
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLP 328


>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
           Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
           putative - Trichomonas vaginalis G3
          Length = 133

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 314 DEDSAHKLFTLVTYVPVASIKGLQTENV 397
           DE+ A K+ T+ +Y  VAS  GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130


>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
           helicase ruvA; n=6; Actinomycetales|Rep: Holliday
           junction ATP-dependent DNA helicase ruvA - Streptomyces
           avermitilis
          Length = 203

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 27  KLKITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQM 203
           +LK  + +P G   G  AI   VT  +   LH  L G+G+  R A  A+  +   AE   
Sbjct: 126 ELKDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAG 183

Query: 204 GTPDI 218
           GTP +
Sbjct: 184 GTPQV 188


>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
           variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
           HAD-superfamily hydrolase, subfamily IA, variant 3 -
           Solibacter usitatus (strain Ellin6076)
          Length = 202

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 105 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 254
           YT   + KRL G G  +R    + E R F E+   T D+RVD      +WS
Sbjct: 31  YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81


>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
           Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
           Ostreococcus tauri
          Length = 95

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +3

Query: 201 MGTPDIRVDTRLNKFLWSRG 260
           M T D+R+D +LNK +WS+G
Sbjct: 1   MKTSDVRIDVKLNKAVWSKG 20


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,639,478
Number of Sequences: 1657284
Number of extensions: 7174916
Number of successful extensions: 14300
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14297
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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