Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0013
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 127 1e-28
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 116 3e-25
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 116 3e-25
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 104 1e-21
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 95 6e-19
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 91 1e-17
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 82 6e-15
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 75 1e-12
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 72 8e-12
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 71 1e-11
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 70 3e-11
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 69 6e-11
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 65 1e-09
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 63 3e-09
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 56 4e-07
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 52 5e-06
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 52 1e-05
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 45 0.001
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 45 0.001
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 36 0.003
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 42 0.008
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 41 0.013
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 39 0.054
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 38 0.095
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 38 0.13
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 36 0.38
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 36 0.67
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 35 1.2
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 2.7
UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside transpo... 33 3.6
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 33 4.7
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 6.2
UniRef50_A0NYT9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_UPI0000D566D7 Cluster: PREDICTED: similar to Probable G... 32 8.2
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 127 bits (307), Expect = 1e-28
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+IKKPV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW
Sbjct: 50 IIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKY 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KKIDRHLYH LYMK KGNVFK
Sbjct: 110 RDSKKIDRHLYHDLYMKCKGNVFK 133
Score = 49.2 bits (112), Expect = 5e-05
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +2
Query: 236 EG*CVQDKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQT 415
+G ++KRVLMEYIH+KKAEK R+KML+DQ L+
Sbjct: 128 KGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIAL 187
Query: 416 FAREDEAALTA 448
A+EDE A A
Sbjct: 188 HAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 116 bits (279), Expect = 3e-25
Identities = 53/84 (63%), Positives = 60/84 (71%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 42 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRY 101
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KKIDRH+YHSLY+K KGNVFK
Sbjct: 102 RESKKIDRHMYHSLYLKVKGNVFK 125
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +2
Query: 236 EG*CVQDKRVLMEYIHRKKAEKARTKMLSDQ 328
+G ++KR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 120 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 116 bits (279), Expect = 3e-25
Identities = 53/84 (63%), Positives = 60/84 (71%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRY 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KKIDRH+YHSLY+K KGNVFK
Sbjct: 110 RESKKIDRHMYHSLYLKVKGNVFK 133
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +2
Query: 236 EG*CVQDKRVLMEYIHRKKAEKARTKMLSDQ 328
+G ++KR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 104 bits (249), Expect = 1e-21
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I+KPV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 50 IIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRY 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
A KID+HLYH LY + KGN FK
Sbjct: 110 REAHKIDKHLYHLLYQQCKGNQFK 133
Score = 39.5 bits (88), Expect = 0.041
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 251 QDKRVLMEYIHRKKAEKARTKMLSDQ 328
++KRVL+++IH+KKAE+ R K LSDQ
Sbjct: 133 KNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 95.5 bits (227), Expect = 6e-19
Identities = 45/84 (53%), Positives = 53/84 (63%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I+KPV VHSRAR RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 70 IIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRRLLRKY 129
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
KKIDRH+Y LYM+AKGNVF+
Sbjct: 130 RADKKIDRHVYRDLYMRAKGNVFR 153
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 91.5 bits (217), Expect = 1e-17
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +3
Query: 24 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 203
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 204 RHLYHSLYMKAKGNVFK 254
+H+YHS+Y+K KGNVFK
Sbjct: 137 KHMYHSMYLKCKGNVFK 153
Score = 40.3 bits (90), Expect = 0.023
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 236 EG*CVQDKRVLMEYIHRKKAEKARTKMLSDQ 328
+G ++KRVLME IH+ KAEKAR K L+DQ
Sbjct: 148 KGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 82.2 bits (194), Expect = 6e-15
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+ K + SR R+R A+R GRH G GKRRGT ARMP K LW
Sbjct: 50 IAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRY 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KIDRHLY +LY KAKGN+FK
Sbjct: 110 RDDEKIDRHLYETLYAKAKGNMFK 133
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 74.5 bits (175), Expect = 1e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
++KK HSR R+R E + GRH G GKR+G+ N+R K +W
Sbjct: 50 ILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRL 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+ K++RHLY SLY+K+KGNVFK
Sbjct: 110 RNSSKLNRHLYRSLYLKSKGNVFK 133
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 71.7 bits (168), Expect = 8e-12
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 50 IIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRY 106
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KKID H+ HSLY++ K NVFK
Sbjct: 107 CESKKIDCHMCHSLYLRVKRNVFK 130
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +3
Query: 9 KKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXT 188
KKPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 52 KKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKE 111
Query: 189 AKKIDRHLYHSLYMKAKGNVFKT 257
KKIDR Y LY++AKG FK+
Sbjct: 112 QKKIDRRTYRMLYIRAKGGQFKS 134
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 505 IIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRY 564
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+KKIDR +YHSL +K KGNVFK
Sbjct: 565 RESKKIDRRMYHSLDLKVKGNVFK 588
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 68.9 bits (161), Expect = 6e-11
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXX 182
+I K SR R RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 50 IIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEM 109
Query: 183 XTAKKIDRHLYHSLYMKAKGNVFK 254
+I + + Y +AKG++FK
Sbjct: 110 RANGEITKEDFRVFYKQAKGHLFK 133
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 64.9 bits (151), Expect = 1e-09
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -3
Query: 304 GLLSLLPVDVLHEHTLVLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF 128
GL+ L VDVLHE+ L L +PF + Y +++ L RS R L L +F
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH-RILILLIQVTF 123
Query: 127 CGIRALAVPLLXPKPQ*RPFLRASVFLRTRAREWT 23
GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 124 SGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 63.3 bits (147), Expect = 3e-09
Identities = 33/76 (43%), Positives = 39/76 (51%)
Frame = +3
Query: 30 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 209
S ARV+K E R+KGR G G RRG A AR P KE W + KIDR
Sbjct: 61 SSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRK 120
Query: 210 LYHSLYMKAKGNVFKT 257
+Y LY AKG F++
Sbjct: 121 VYRKLYRMAKGGAFRS 136
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 56.0 bits (129), Expect = 4e-07
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 VIKK-PVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXX 179
+IKK P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 48 IIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKE 107
Query: 180 XXTAKKIDRHLYHSLYMKAKGNVFKT 257
K ID Y LY K KGN+FK+
Sbjct: 108 LKEKKIIDNKTYWDLYKKVKGNLFKS 133
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/64 (40%), Positives = 31/64 (48%)
Frame = +3
Query: 63 RRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKG 242
RRKGR G G+R+G A AR+ KE W + IDR Y LYM AKG
Sbjct: 71 RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKG 130
Query: 243 NVFK 254
F+
Sbjct: 131 GTFR 134
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 VIK-KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXX 179
VIK +P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 54 VIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKG 113
Query: 180 XXTAKKIDRHLYHSLYMKAKGNVFKT 257
I Y Y KAKG +++
Sbjct: 114 MREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/81 (33%), Positives = 32/81 (39%)
Frame = +3
Query: 9 KKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXT 188
KK +S R++K E KGR G G RGT AR P+K W T
Sbjct: 51 KKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKT 110
Query: 189 AKKIDRHLYHSLYMKAKGNVF 251
KID+ Y Y K F
Sbjct: 111 NNKIDKKTYRRYYRIIKSGSF 131
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 12 KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXT 188
KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 49 KPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKH 108
Query: 189 AKKIDRHLYHSLYMKAKGNVFKT 257
ID+ + +LY AKG F++
Sbjct: 109 RGVIDKATWRNLYRMAKGGYFES 131
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 36.3 bits (80), Expect(2) = 0.003
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 198 IDRHLYHSLYMKAKGNVFKT 257
ID HLY SLY+K KGNV KT
Sbjct: 108 IDYHLYRSLYLKVKGNVLKT 127
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 254 DKRVLMEYIHRKKAEKARTKMLSDQ 328
DKR+ E+I + KA+ A+ K+LSDQ
Sbjct: 129 DKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 26.2 bits (55), Expect(2) = 0.003
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 54 TEARRKGRHCGFGKRRGT 107
T ARR+G H G KR+GT
Sbjct: 90 TLARRRGWHMGIRKRKGT 107
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +3
Query: 45 RKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 224
RK + +G+ G R+G AR K++W K IDRH Y L
Sbjct: 67 RKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYREL 124
Query: 225 YMKAKGNVFK 254
Y+K KG +K
Sbjct: 125 YLKTKGGNYK 134
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 41.1 bits (92), Expect = 0.013
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 231 KAKGNVFKTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRNCC 410
K + KT SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 3 KRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRKSS 62
Query: 411 RPSLEKTKPR 440
R S + +PR
Sbjct: 63 RLSPRRKRPR 72
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 39.1 bits (87), Expect = 0.054
Identities = 22/90 (24%), Positives = 46/90 (51%)
Frame = -3
Query: 448 SGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLH 269
+G +FS++G FL++ TFL ++ ++F GL + R G L ++ +
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIIS--IFFYLRGLLRTSGFHRQGYLIMIIASLFP 190
Query: 268 EHTLVLNTLPFAFM*SEWYRCLSIFLAVLY 179
T+ LN + +F+ +++ +S+ +LY
Sbjct: 191 WVTVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 38.3 bits (85), Expect = 0.095
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 197
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 198 IDRHLY-HSLYMKAKGNVFK 254
ID+ +Y H ++MK KG V+K
Sbjct: 56 IDKLVYYHDMFMKVKGKVYK 75
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 37.9 bits (84), Expect = 0.13
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = -2
Query: 263 HACLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLXKA 84
+A E + L + V+ V+ V LL V E+ NP +P LL + +GST L A
Sbjct: 57 NAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLLGYQNVGSTLPLPYA 116
Query: 83 TVTTLSTCLCVFADTGAGVDCYRFLDD 3
+ L + VF+ G+D ++ LDD
Sbjct: 117 HMPALPSSQGVFSVVSPGMDGHKILDD 143
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 36.3 bits (80), Expect = 0.38
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = -2
Query: 254 LEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLXKATV 78
LEH+TL L +E ++ +P++L +V +Q + + L+L P L HT + T++L V
Sbjct: 98 LEHVTLSLSIEGLIKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
Score = 32.3 bits (70), Expect = 6.2
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = -3
Query: 394 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVL 251
+GGN + LA LL +AA L L+ L LL L DVL E+ L+L
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALIL 98
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 35.5 bits (78), Expect = 0.67
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +3
Query: 30 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 209
SR R R ++KGR G G R+G R ++E W K++
Sbjct: 56 SRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPR 112
Query: 210 LYHSLYMKAKGNVFK 254
++ LY KGN F+
Sbjct: 113 VWRQLYRMVKGNYFR 127
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 3 VIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 140
+IKK + S R + ++ G G G+R+GT NAR K LW
Sbjct: 49 IIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILW 94
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 33.5 bits (73), Expect = 2.7
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 2 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLWXEK 100
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
>UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside
transporter 1 (Equilibrative nitrobenzylmercaptopurine
riboside-sensitive nucleoside transporter)
(Equilibrative NBMPR-sensitive nucleoside transporter)
(Nucleoside transporter, es-type) (Solute carrier family
29 member 1).; n=3; Deuterostomia|Rep: Equilibrative
nucleoside transporter 1 (Equilibrative
nitrobenzylmercaptopurine riboside-sensitive nucleoside
transporter) (Equilibrative NBMPR-sensitive nucleoside
transporter) (Nucleoside transporter, es-type) (Solute
carrier family 29 member 1). - Takifugu rubripes
Length = 415
Score = 33.1 bits (72), Expect = 3.6
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Frame = -3
Query: 382 TFLAALACLLYFIA---AGLSLVAKHLRPGLLSL-LPVDVLHEHTLV-----LNT----- 245
T+ +AC L F AG SL A +RPG+ S+ LPV V V N
Sbjct: 285 TYFIPVACFLLFNMMDWAGRSLTAVCMRPGIDSIWLPVLVAARLVFVPLFMLCNVQPRYY 344
Query: 244 LPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLC 143
LP F WY IF + F + +L +LC+C
Sbjct: 345 LPVFFSHDAWYIIFMIFFS---FSNGYLASLCMC 375
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 186 TAKKIDRHLYHSLYMKAKGNVFK 254
+A K+ H+ HSLY KAKG VFK
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFK 80
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 6.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 436 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 293
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_A0NYT9 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 216
Score = 32.3 bits (70), Expect = 6.2
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -3
Query: 415 GLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLNTLPF 236
GL ++GG F++ L+ LL IAA + A RP + S V H LVL+ + F
Sbjct: 21 GLCVLGIVGGYFFMSVLSSLLCIIAAA-GIYAALPRPNVPSGSVKPVCHPPVLVLDAIGF 79
Query: 235 AF 230
AF
Sbjct: 80 AF 81
>UniRef50_UPI0000D566D7 Cluster: PREDICTED: similar to Probable
G-protein coupled receptor Mth-like 1 precursor
(Methuselah-like 1 protein); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Probable G-protein
coupled receptor Mth-like 1 precursor (Methuselah-like 1
protein) - Tribolium castaneum
Length = 401
Score = 31.9 bits (69), Expect = 8.2
Identities = 27/84 (32%), Positives = 38/84 (45%)
Frame = -3
Query: 367 LACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLNTLPFAFM*SEWYRCLSIFLA 188
L C+ F G+S + + L P+ V+ T VLNTL + + IFL
Sbjct: 301 LLCVKLFFIMGISWIFELLSAAFQESNPLQVIWHVTDVLNTL----------QGILIFLI 350
Query: 187 VLYFRSNFLRTLCLCTHSSFCGIR 116
++ FR +R L SFCGIR
Sbjct: 351 LVVFRKRVVRGL---ADRSFCGIR 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,621,458
Number of Sequences: 1657284
Number of extensions: 8133483
Number of successful extensions: 22931
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 22293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22906
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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