Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0003
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 72 9e-12
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 70 3e-11
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 70 3e-11
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 70 3e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 51 1e-05
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 44 0.002
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.31
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 0.55
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 35 0.96
UniRef50_Q5G5D5 Cluster: Envelope glycoprotein syncytin-A; n=9; ... 34 2.2
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 32 6.8
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 32 6.8
UniRef50_UPI00005A556A Cluster: PREDICTED: hypothetical protein ... 32 8.9
UniRef50_Q604H1 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 71.7 bits (168), Expect = 9e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 416 HWPSFYNVVTGKTLALPNLIALQHIPLSPAG 508
HWPSFYNVVTGKTLALPNLIALQHIPLSPAG
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAG 35
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 97
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 51
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 55
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 37
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 51.2 bits (117), Expect = 1e-05
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
L +L RRDWENP +TQ +RL AHPPF SW
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSW 44
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 427 VLQRRDWENPGVTQLNRLAAHPPFASW 507
VL R DW N +T LNRL AHP FASW
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASW 43
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 43.6 bits (98), Expect = 0.003
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 418 LAVVLQRRDWENPGVTQLNRLAAHPPFASW 507
LA +L R DW+NP +T +NRL +H P W
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGW 47
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 36.7 bits (81), Expect = 0.31
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 362 PCGGARYPIRPIVSRIT 412
P GGARYPIRPIVSRIT
Sbjct: 259 PRGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 0.55
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 427 VLQRRDWENPGVTQLNRLAAHPP 495
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 35.1 bits (77), Expect = 0.96
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 427 VLQRRDWENPGVTQLNRLAAHPP 495
++ RRDWENP Q+N++ AH P
Sbjct: 7 IINRRDWENPITVQVNQVKAHSP 29
>UniRef50_Q5G5D5 Cluster: Envelope glycoprotein syncytin-A; n=9;
Muroidea|Rep: Envelope glycoprotein syncytin-A - Mus
musculus (Mouse)
Length = 617
Score = 33.9 bits (74), Expect = 2.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 110 FAFCICTIFPLNQTYLVFWSALLKMDLLLVMKHFFSFSRDCWLC 241
+ FC+ +FP + Y W L+ + L+ + SFS +CW+C
Sbjct: 5 WVFCLL-LFPCSSAYSDSWMPLVNLTQHLLQEANSSFSSNCWVC 47
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 418 LAVVLQRRDWENP 456
LAVVLQRRDWENP
Sbjct: 179 LAVVLQRRDWENP 191
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 421 PVNCNTTHYRANWVPGPPTRA 359
PV N +R W+PGPPTR+
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRS 639
>UniRef50_UPI00005A556A Cluster: PREDICTED: hypothetical protein
XP_852068; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_852068 - Canis familiaris
Length = 346
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 421 PVNCNTTHYRANWVPGPPTRAGKPSWEPTQRE 326
P T R WVPGPP+R+ P + T+ E
Sbjct: 268 PGGRTTGAQRRPWVPGPPSRSASPGTQDTREE 299
>UniRef50_Q604H1 Cluster: Putative uncharacterized protein; n=2;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Methylococcus capsulatus
Length = 126
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 405 RLTIGRIGYRAPPQGQESPAGSQHRGKEA*EPRHIEM*NAKSSWHV 268
R+T+GR+G P G+ GS R +A RH+ N K WH+
Sbjct: 23 RITVGRLGEFLFPAGRYVYTGSARRKLDARIRRHLSR-NKKLRWHI 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,024,998
Number of Sequences: 1657284
Number of extensions: 12059831
Number of successful extensions: 32309
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 31238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32303
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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