Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0062.Seq
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE151...    36   0.79 
UniRef50_Q96N35 Cluster: Transmembrane protein 83; n=2; Homo sap...    36   0.79 
UniRef50_A6PTE1 Cluster: Na+/solute symporter; n=3; Victivallis ...    34   4.2  
UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, wh...    33   7.4  

>UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE1515w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE1515w - Plasmodium falciparum (isolate 3D7)
          Length = 1419

 Score = 36.3 bits (80), Expect = 0.79
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +3

Query: 33  FQTCNAKCSSKFLNVIFFLLLYVVLGIFVWRTVLINFVSLIYYFEL**HFKK--NDEEIV 206
           F   N++C  KFLN   F+++Y+ + +  + T+  ++V+  YY  +  +F K  ND    
Sbjct: 73  FFNFNSRCDDKFLNTKLFVVVYLPICLKCFYTLFFDYVA--YYIYIRYYFNKINNDFRNF 130

Query: 207 YFTCSSYACVYI 242
           +F+  SY  + +
Sbjct: 131 FFSSLSYENIQV 142


>UniRef50_Q96N35 Cluster: Transmembrane protein 83; n=2; Homo
           sapiens|Rep: Transmembrane protein 83 - Homo sapiens
           (Human)
          Length = 136

 Score = 36.3 bits (80), Expect = 0.79
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = -2

Query: 399 LNTVVSVQLCSAQLLAGTSETHLMFVRLYNLISLL--IQFCI--YISMSLS*FKSIEYTH 232
           L+  + +Q  S  L    S++  +F  +   +SLL  I  C+  Y+S+SLS F     TH
Sbjct: 17  LHIFLLLQKISVSLPLSLSQSVCLFYSISLCVSLLLHISLCVSVYVSLSLSSFPCFSLTH 76

Query: 231 THTTSM*NK 205
           THT S  +K
Sbjct: 77  THTHSQLSK 85


>UniRef50_A6PTE1 Cluster: Na+/solute symporter; n=3; Victivallis
           vadensis ATCC BAA-548|Rep: Na+/solute symporter -
           Victivallis vadensis ATCC BAA-548
          Length = 675

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 54  CSSKFLNVIFFLLLYVVLGIFVWRTVLINFVSL 152
           C   F N+ F +LL+ +L +F WRT+      L
Sbjct: 200 CQGTFCNIAFLILLFYLLTVFDWRTIAATLTEL 232


>UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_61,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 927

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 237 YIQLI*INLMTLKCRYKIELIMRLNYINAQTLDASPKFPQAAEQNTIVQKQPYLIYIETI 416
           Y+QL    L    C Y++ +  ++ ++ +  L  SPK  Q  +QNT+ Q Q  L+Y   +
Sbjct: 201 YLQLRLQLLYEKICSYEVRIRSKMLFLISLVLIDSPK--QLQQQNTVQQNQNTLVYKLNV 258

Query: 417 *NRNQKF---HLYDLL 455
            + N K     LYD+L
Sbjct: 259 IDFNNKIIKAGLYDVL 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,229,015
Number of Sequences: 1657284
Number of extensions: 10643484
Number of successful extensions: 22013
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21995
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)