Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F11f
(431 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 214 6e-55
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 178 4e-44
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 144 7e-34
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 122 4e-27
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 120 1e-26
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 112 3e-24
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 100 1e-20
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 100 1e-20
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 100 3e-20
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 97 1e-19
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 95 7e-19
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 4e-18
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 91 7e-18
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 63 2e-09
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 5e-05
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 43 0.003
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.006
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 40 0.017
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 37 0.16
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.16
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.36
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.36
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 36 0.48
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 35 0.84
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 34 1.5
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 3.4
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 32 4.5
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 4.5
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 4.5
UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57; Betaproteo... 32 5.9
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 214 bits (523), Expect = 6e-55
Identities = 99/116 (85%), Positives = 107/116 (92%)
Frame = +1
Query: 82 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 261
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 262 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AII SGPRED
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRED 124
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 178 bits (434), Expect = 4e-44
Identities = 83/110 (75%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 279
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 280 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++ SGPRED
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPRED 117
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 144 bits (349), Expect = 7e-34
Identities = 75/127 (59%), Positives = 94/127 (74%)
Frame = +1
Query: 49 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 228
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 229 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 408
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 409 XSGPRED 429
GPRED
Sbjct: 117 ACGPRED 123
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 122 bits (293), Expect = 4e-27
Identities = 52/109 (47%), Positives = 76/109 (69%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 282
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 283 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI P ED
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHED 127
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 120 bits (290), Expect = 1e-26
Identities = 59/109 (54%), Positives = 77/109 (70%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 282
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 283 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ + PRE+
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREE 117
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 112 bits (269), Expect = 3e-24
Identities = 58/108 (53%), Positives = 72/108 (66%)
Frame = +1
Query: 106 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 285
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 286 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
M GRN GKK A IVK AF++I+ TG+NPLQV + AII + PRE+
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREE 143
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 100 bits (240), Expect = 1e-20
Identities = 54/137 (39%), Positives = 82/137 (59%)
Frame = +1
Query: 19 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 198
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 199 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 378
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 379 PLQVLVTAIIXSGPRED 429
P+QVLV+A+ + PRE+
Sbjct: 114 PIQVLVSAVENAAPREE 130
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 100 bits (239), Expect = 1e-20
Identities = 46/107 (42%), Positives = 74/107 (69%)
Frame = +1
Query: 109 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 288
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 289 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
N GKK + +R V+ AF+I++ T +NP+QVLV AI +GPRE+
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREE 109
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 99.5 bits (237), Expect = 3e-20
Identities = 52/109 (47%), Positives = 73/109 (66%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 282
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 283 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+ SGPRED
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPRED 128
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 97.5 bits (232), Expect = 1e-19
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Frame = +1
Query: 67 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 240
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 241 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGP 420
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI +GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 421 RED 429
RE+
Sbjct: 122 REE 124
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 94.7 bits (225), Expect = 7e-19
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 282
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 283 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXS 414
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI +
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 415 GPRED 429
PRED
Sbjct: 134 APRED 138
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 4e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 247 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 402
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 91.5 bits (217), Expect = 7e-18
Identities = 49/109 (44%), Positives = 66/109 (60%)
Frame = +1
Query: 103 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 282
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 283 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
LM N GKK + I++ A I+ T ENP+QV+V A+ SGPRE+
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREE 113
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 63.3 bits (147), Expect = 2e-09
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 139 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 315
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 316 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
A +++ AF+II T +NP+Q+LV+AI S PRE+
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREE 102
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 5e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 13 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 177
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -1
Query: 353 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 189
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 349 EIIHLLTGENPLQVLVTAIIXSGPRED 429
++ HLL +NPLQVLV AII SGPRED
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPRED 200
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 220 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 399
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 400 AIIXSGP 420
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 40.3 bits (90), Expect = 0.017
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 232 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIX 411
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 412 SGP 420
+ P
Sbjct: 69 ASP 71
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.1 bits (82), Expect = 0.16
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +1
Query: 262 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGP 420
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.16
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 268 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 405
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 35.9 bits (79), Expect = 0.36
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 256 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGP 420
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.36
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 1 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 180
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 181 KEKYAKYLPH 210
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 35.5 bits (78), Expect = 0.48
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 223 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 402
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 403 IIXSGP 420
+ P
Sbjct: 174 LDKMAP 179
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 34.7 bits (76), Expect = 0.84
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 256 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIXSGP 420
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 33.9 bits (74), Expect = 1.5
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 10 IMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSLQDYISV 180
++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D + Y S
Sbjct: 207 LVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQYPSS 264
Query: 181 KEKYAKYLPHSAG 219
+ K+ + P G
Sbjct: 265 EFKFKTFTPPKTG 277
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 32.7 bits (71), Expect = 3.4
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1
Query: 226 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 405
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 32.3 bits (70), Expect = 4.5
Identities = 27/91 (29%), Positives = 37/91 (40%)
Frame = +1
Query: 157 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 336
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 337 KHAFEIIHLLTGENPLQVLVTAIIXSGPRED 429
A + HLL NP LV AI+ S ED
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYED 180
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 4.5
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 34 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 123
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 4.5
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 268 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 405
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
>UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57;
Betaproteobacteria|Rep: DNA topoisomerase III -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 881
Score = 31.9 bits (69), Expect = 5.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 408 DNGSHEYLQRVFSS*QVNNFKRMFDNTYGHQFFAIVPT 295
+N H++ +++ + V KR+FDNT FAI+PT
Sbjct: 353 NNNYHQFAKQITDNKWVKPNKRIFDNTKISDHFAIIPT 390
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 31.9 bits (69), Expect = 5.9
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 265 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIIXS 414
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T ++ S
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS 527
>UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 573
Score = 31.9 bits (69), Expect = 5.9
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 119 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 244
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 351 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 391
>UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 569
Score = 31.9 bits (69), Expect = 5.9
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 119 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 244
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 350 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 390
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,584,607
Number of Sequences: 1657284
Number of extensions: 8567104
Number of successful extensions: 21061
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 20565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21047
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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