Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F10f
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8R8A5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.9  
UniRef50_Q12296 Cluster: Protein MAM3; n=3; Saccharomycetaceae|R...    33   5.1  
UniRef50_A6ESG4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  
UniRef50_Q24C08 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q8R8A5 Cluster: Putative uncharacterized protein; n=1;
           Thermoanaerobacter tengcongensis|Rep: Putative
           uncharacterized protein - Thermoanaerobacter
           tengcongensis
          Length = 193

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -3

Query: 439 LIDMDSLDVSFI-QKTRFHFDILRNGLMYRLIIEYIIEMPKTVK 311
           LI+ D+LD  ++ QK   H+D+L  G++ + I +YI+    T+K
Sbjct: 142 LIEKDNLDRPYLYQKIEKHYDLLAGGIVEKPIEQYIVVPKGTIK 185


>UniRef50_Q12296 Cluster: Protein MAM3; n=3; Saccharomycetaceae|Rep:
           Protein MAM3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 706

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 20/55 (36%), Positives = 33/55 (60%)
 Frame = -3

Query: 373 RNGLMYRLIIEYIIEMPKTVKIFVLKNWDDD*SVSYNVGSENVNQ*QVNREDNKE 209
           +NG++  +I   +  +PKT+ I   K+WD+  S     G+EN+NQ   NR D++E
Sbjct: 608 KNGIVESVIT--VKGVPKTI-IGPAKDWDESKS---EYGNENINQENSNRSDDRE 656


>UniRef50_A6ESG4 Cluster: Putative uncharacterized protein; n=1;
           unidentified eubacterium SCB49|Rep: Putative
           uncharacterized protein - unidentified eubacterium SCB49
          Length = 596

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = -3

Query: 442 ILIDMDSLDVSFIQKTRFHFDILRNGLM-YRLIIE----YIIEMPKTVKIFVLKNWDDD* 278
           ++++ D    SF +  R++ DIL NG+  Y L++E      ++ P+ V   +  N DDD 
Sbjct: 478 VILNADKNTYSFHKNERYYNDILDNGMEGYNLLVEDDFLKCLDCPQEVIEELYDNDDDDG 537

Query: 277 SVSYNVGSENVN 242
           +V+ ++ +  +N
Sbjct: 538 NVNIDIDNFKMN 549


>UniRef50_Q24C08 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 548

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 22/88 (25%), Positives = 41/88 (46%)
 Frame = -3

Query: 400 KTRFHFDILRNGLMYRLIIEYIIEMPKTVKIFVLKNWDDD*SVSYNVGSENVNQ*QVNRE 221
           K + +FDI++N L      ++ I      + F+L +   D  + Y + +  +     N  
Sbjct: 44  KNQLNFDIIQNELQELEFTQFKILSADQQEDFILNSKKSD--IIYTILAIRIKDQIGNLL 101

Query: 220 DNKEE*CKRLCLIYSKQYPSEHLTVYLD 137
           +NK+  C++L  +Y K   S +   YLD
Sbjct: 102 ENKKTYCQKLIYLYKKLVGSFYNCSYLD 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,359,644
Number of Sequences: 1657284
Number of extensions: 7215831
Number of successful extensions: 12314
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12313
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)