Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F04f
         (359 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D9C447 Cluster: PREDICTED: similar to secreted f...    31   4.6  
UniRef50_A1BA73 Cluster: 5-oxoprolinase; n=2; Rhodobacteraceae|R...    31   6.1  

>UniRef50_UPI0000D9C447 Cluster: PREDICTED: similar to secreted
           frizzled-related protein 5; n=2; Catarrhini|Rep:
           PREDICTED: similar to secreted frizzled-related protein
           5 - Macaca mulatta
          Length = 376

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 169 CPSSTRGRKDQHSDPGVRCASEWFYWVQGRPEPRQPR 59
           CP   RGR++QHS P  + AS     + G   P   R
Sbjct: 46  CPGQARGRQEQHSQPAAQGASTLHNHLGGSNTPASAR 82


>UniRef50_A1BA73 Cluster: 5-oxoprolinase; n=2; Rhodobacteraceae|Rep:
           5-oxoprolinase - Paracoccus denitrificans (strain Pd
           1222)
          Length = 692

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 93  GFRVAQNRGNHEKNCNESLHFSLYW 19
           GFR   + G H++ CN SLHF + W
Sbjct: 86  GFRDILHIGRHKRPCNFSLHFDVPW 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,565,588
Number of Sequences: 1657284
Number of extensions: 4101678
Number of successful extensions: 11874
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11873
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)