Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F01f
         (505 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24NS6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_Q7NAK0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.5  

>UniRef50_Q24NS6 Cluster: Putative uncharacterized protein; n=1;
           Desulfitobacterium hafniense Y51|Rep: Putative
           uncharacterized protein - Desulfitobacterium hafniense
           (strain Y51)
          Length = 102

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 221 TFSFEKHLSDETFLSEFEFENNVNVLMDQVYISIEIQE 334
           + +F  H  D   L +F+F+NN+NVL+    I I+I+E
Sbjct: 41  SINFNNHAID---LDDFQFKNNINVLLGDREIPIQIEE 75


>UniRef50_Q7NAK0 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma gallisepticum|Rep: Putative uncharacterized
           protein - Mycoplasma gallisepticum
          Length = 552

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 19/97 (19%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = -2

Query: 390 FCILMHYINLKSYDGGY*YSCISILIYT*SINTFTLFSNSNSDKNVSSLKCFSNE-NVSQ 214
           F IL + ++      G   S   + ++  +      F+N+  +    SLK  +++ +++Q
Sbjct: 425 FVILTYIVSANKQSAGIIISLSLVSVFIVASVFLITFNNTLINNQNFSLKSLNSDLSINQ 484

Query: 213 ILF*FIMLLNVTNKLYLVMCFIEMFIFLSVSVASNYK 103
           IL+  + ++   N +Y+V+    ++ F++ +   N+K
Sbjct: 485 ILYALLAIILSLNFIYVVLSIYFIYFFINKNKIFNFK 521


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,736,709
Number of Sequences: 1657284
Number of extensions: 5691352
Number of successful extensions: 12811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12802
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)