Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E07f
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1; ...    56   3e-07
UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gamb...    54   1e-06
UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;...    52   4e-06
UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;...    40   0.032
UniRef50_UPI000065F3B8 Cluster: Homolog of Homo sapiens "Splice ...    32   4.9  
UniRef50_Q5RH37 Cluster: Novel protein similar to vertebrate lam...    32   4.9  
UniRef50_Q8C687 Cluster: 10 days neonate skin cDNA, RIKEN full-l...    32   6.5  
UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza sat...    32   6.5  
UniRef50_Q25431 Cluster: ECM 18; n=1; Lytechinus variegatus|Rep:...    31   8.6  

>UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 108

 Score = 56.0 bits (129), Expect = 3e-07
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +1

Query: 205 CAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRIDPDS 381
           C   T C W VY P ++ I+  M N  C C   T C  T+DD  + A+++RC + D ++
Sbjct: 49  CTDNTACGWAVYKPFTRSIENYMRNT-CSCPEPTKCIRTDDDLSISAFVYRCRKTDSET 106


>UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000019800 - Anopheles gambiae
           str. PEST
          Length = 115

 Score = 54.0 bits (124), Expect = 1e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 205 CAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRC 360
           C   TPC W VY+P ++ I + M N  C C     C  T+DD  + AY++RC
Sbjct: 52  CEGNTPCGWAVYTPATRAIDSFMKNT-CDCEKLKQCVRTDDDVSISAYVYRC 102


>UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 106

 Score = 52.4 bits (120), Expect = 4e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = +1

Query: 202 ICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRID 372
           IC   TPC W VY+ +++ I   M N+ C C+ +  C   +DD  + AY++RC +ID
Sbjct: 45  ICQGRTPCGWAVYNKMTRFIDYFMRNK-CECNKEKRCLRDDDDISITAYVYRC-KID 99


>UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 134

 Score = 39.5 bits (88), Expect = 0.032
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 217 TPCAWTVYSPVSKMIQTNMTNRFCICSADT-TCAITEDDTEVHAYIHRC 360
           TPC W  Y+PV++     M N  C C  +T  C  T ++  + AY++ C
Sbjct: 66  TPCGWNTYNPVTRRSTIFMPNT-CKCPDETYKCVRTGENVSMSAYVYHC 113


>UniRef50_UPI000065F3B8 Cluster: Homolog of Homo sapiens "Splice
            Isoform 4 of Kinesin-like motor protein C20orf23; n=2;
            Coelomata|Rep: Homolog of Homo sapiens "Splice Isoform 4
            of Kinesin-like motor protein C20orf23 - Takifugu
            rubripes
          Length = 3070

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -1

Query: 282  SVCHVSLYHLRNWRINSPGAR---SSRGANYGLISRCLCHFCGSRRFCCFGSLCRRLSGI 112
            +VC +S  H+ N  + S   R    S    Y L     CH    R FCC  +  R+ +G+
Sbjct: 2962 TVCQLSKIHMFNQSVRSVWTRPLDDSTQLVYILTDPSSCHLSQPRDFCCLSTQSRQ-AGM 3020

Query: 111  CYL 103
            C L
Sbjct: 3021 CVL 3023


>UniRef50_Q5RH37 Cluster: Novel protein similar to vertebrate laminin,
            beta family protein; n=1; Danio rerio|Rep: Novel protein
            similar to vertebrate laminin, beta family protein -
            Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 1713

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 186  RCLCHFCGSRRFCCFGSLCR--RLSGICYLEP-VLGNIGSRESTNRQN 52
            RC+C+  GS R  C   LC   R+SG C   P V G +  R + N  N
Sbjct: 996  RCMCNLVGSSRQSCVDGLCECDRISGQCPCLPGVEGQLCDRCAPNTWN 1043


>UniRef50_Q8C687 Cluster: 10 days neonate skin cDNA, RIKEN
           full-length enriched library, clone:4732458P17
           product:zinc finger protein 101, full insert sequence;
           n=14; Murinae|Rep: 10 days neonate skin cDNA, RIKEN
           full-length enriched library, clone:4732458P17
           product:zinc finger protein 101, full insert sequence -
           Mus musculus (Mouse)
          Length = 612

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 45  ITDSGGLCFRGCQCSQGQAPSNRYRSTDD 131
           + +  G C RGCQC Q QA S  Y   +D
Sbjct: 68  VIEKDGECERGCQCEQTQAQSPEYIVNED 96


>UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza
           sativa|Rep: PHD finger protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 175

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 288 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 166
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


>UniRef50_Q25431 Cluster: ECM 18; n=1; Lytechinus variegatus|Rep:
           ECM 18 - Lytechinus variegatus (Sea urchin)
          Length = 505

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = +1

Query: 223 CAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRIDPD 378
           C    Y  V +  + N T  FC C ADT     + DTEVH     C R  PD
Sbjct: 291 CTQDGYYAVEQCYEGNGT--FCWC-ADTETGAVKPDTEVHGARADCERFLPD 339


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,282,783
Number of Sequences: 1657284
Number of extensions: 6351672
Number of successful extensions: 16141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16134
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)