Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301D12f
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 206 2e-52
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 200 1e-50
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 177 1e-43
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 173 2e-42
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 167 1e-40
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 163 2e-39
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 159 3e-38
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 155 7e-37
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 140 1e-32
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 140 1e-32
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 140 2e-32
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 135 5e-31
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 134 9e-31
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 132 3e-30
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 131 8e-30
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 130 1e-29
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 127 1e-28
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 122 5e-27
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 121 9e-27
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 113 2e-24
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 111 9e-24
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 109 5e-23
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 101 1e-20
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 100 2e-20
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 98 9e-20
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 92 8e-18
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 85 1e-15
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 79 8e-14
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 76 6e-13
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 75 1e-12
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 74 2e-12
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 73 3e-12
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 72 7e-12
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 72 9e-12
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 72 9e-12
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 69 8e-11
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 67 2e-10
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 66 3e-10
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 58 9e-08
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 58 1e-07
UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1; Meta... 56 5e-07
UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6; Su... 55 8e-07
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 53 3e-06
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 52 6e-06
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 52 6e-06
UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp sub... 51 2e-05
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 50 2e-05
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 49 6e-05
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 48 1e-04
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 48 2e-04
UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1; Ther... 46 5e-04
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 45 0.001
UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4; Py... 43 0.004
UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1; A... 41 0.019
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 38 0.14
UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1; Acan... 38 0.18
UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 36 0.72
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 36 0.72
UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13; ... 35 0.96
UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5; Methanos... 34 2.2
UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3; ... 33 2.9
UniRef50_Q4UH03 Cluster: Putative uncharacterized protein; n=3; ... 33 5.1
UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089... 33 5.1
UniRef50_A3DBG8 Cluster: Ig-like, group 2 precursor; n=1; Clostr... 32 6.8
UniRef50_A7T299 Cluster: Predicted protein; n=3; Nematostella ve... 32 6.8
UniRef50_A7BBP5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_A5JZJ4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A1CN65 Cluster: Nonribosomal peptide synthase, putative... 32 8.9
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 206 bits (504), Expect = 2e-52
Identities = 93/134 (69%), Positives = 118/134 (88%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 473 LDLEHLGIPETEYS 514
LD+E LGIPE EYS
Sbjct: 121 LDVEQLGIPEQEYS 134
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 200 bits (489), Expect = 1e-50
Identities = 88/133 (66%), Positives = 112/133 (84%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M E RL++ S+LKKVLEA+KDL+ A FDC G LQAMD+SHV+LVSL LR++GF+ Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+SMGMNLG+MSK+LKCAG+ D +TIKA D +D VTF+FESP Q+K++D+EMKLM+
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 473 LDLEHLGIPETEY 511
+D EHLGIP+ EY
Sbjct: 121 IDSEHLGIPDAEY 133
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 177 bits (431), Expect = 1e-43
Identities = 76/133 (57%), Positives = 107/133 (80%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQAMDNSH++LV+L L A FD+Y
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+ +G+NL S++KILKCA D D VT+KA D+AD + +FESP +++V +YEMKLM+
Sbjct: 61 RCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMD 120
Query: 473 LDLEHLGIPETEY 511
+D EHLGIP+T+Y
Sbjct: 121 IDQEHLGIPDTQY 133
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 173 bits (421), Expect = 2e-42
Identities = 75/134 (55%), Positives = 110/134 (82%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EARL ++ +LKKV++AIKDL+ FDC+D+GI LQAMDNSHV+LVS+ L+A+GF Y
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+++G+NL S++K+L+ A ++D +TIKA+D D + VFES +++S+Y++KLM+
Sbjct: 61 RCDRNVALGVNLTSLTKVLRAAQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMD 120
Query: 473 LDLEHLGIPETEYS 514
+D EHLGIP+TEY+
Sbjct: 121 IDQEHLGIPDTEYA 134
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 167 bits (406), Expect = 1e-40
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 473 LDLEHLGIPETEYS 514
LD +H+ IP+ +Y+
Sbjct: 121 LDQDHMEIPKKDYT 134
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 163 bits (396), Expect = 2e-39
Identities = 69/133 (51%), Positives = 103/133 (77%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EA+L + +LKK+L+AIK+L+T A F+C++ GI LQAMDNSHV+LV++ + GF +Y
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQAMDNSHVALVAVKILVSGFKRY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDR + +G+NLGS++K+LKCA D D T+KA D AD + ++E+ N +++++YEMKLM
Sbjct: 61 RCDRPMPLGVNLGSLTKVLKCAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLME 120
Query: 473 LDLEHLGIPETEY 511
+D + L IP+TEY
Sbjct: 121 IDADALTIPDTEY 133
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 159 bits (387), Expect = 3e-38
Identities = 68/133 (51%), Positives = 103/133 (77%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQAMDNSHV+L ++ LR D F+++
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQAMDNSHVALSAIELRTDCFEEF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDR +S+G++L S+ KILK A + D + +K D+ D + FESP ++V ++EMKLM+
Sbjct: 61 RCDRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMD 120
Query: 473 LDLEHLGIPETEY 511
+D EHLGIP+T+Y
Sbjct: 121 IDSEHLGIPDTQY 133
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 155 bits (375), Expect = 7e-37
Identities = 66/133 (49%), Positives = 97/133 (72%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEA ++LK+++E KDLL ATFDCD+ G+ +Q MD SHV+LVSL L A+GF KY
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDTSHVALVSLQLHAEGFKKY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+ + +++ S+SKI+KC ++ +V +KA+D D + FVF N ++ Y +KLM
Sbjct: 61 RCDRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQGDVMAFVFN--NDNRICTYTLKLMC 118
Query: 473 LDLEHLGIPETEY 511
+D+EHLGIP+++Y
Sbjct: 119 IDVEHLGIPDSDY 131
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 140 bits (340), Expect = 1e-32
Identities = 62/131 (47%), Positives = 96/131 (73%)
Frame = +2
Query: 119 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 298
EA L ++ +LKKV++AIKDL FDC + G+Q+Q+MD+SHV+LVSL LR F ++RC
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQSMDSSHVALVSLLLRESAFAEFRC 63
Query: 299 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 478
DR S+GMN+ S++KILK G D++ ++ + +AD V+F ES +++++D+E+KLM ++
Sbjct: 64 DRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIE 123
Query: 479 LEHLGIPETEY 511
EH+ IPE Y
Sbjct: 124 SEHMEIPEQHY 134
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 140 bits (340), Expect = 1e-32
Identities = 62/132 (46%), Positives = 96/132 (72%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EA+L +SILKK+ E IKDL+ A D D++G++LQA+D +HVSLVSL L GF Y
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNHVSLVSLHLLDSGFSHY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDR +G+N+ S++K+ K G ++V I ++D+ DN+ FVFE+ ++KV+++ +KLM+
Sbjct: 61 RCDRERVLGVNIASLNKVFKLCGANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMS 120
Query: 473 LDLEHLGIPETE 508
++L+ L IP+ E
Sbjct: 121 IELDSLNIPDCE 132
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 140 bits (339), Expect = 2e-32
Identities = 59/134 (44%), Positives = 99/134 (73%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL IL+KV EAI +L++ +C+++G+ +QAMDNSHVSLV L L+ F++Y
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQAMDNSHVSLVGLYLKDTAFERY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCD+N ++G+N ++ K+LK + D V ++ D+++++ F+FE+PN ++VS++E+ L++
Sbjct: 61 RCDKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDDSESLIFIFETPNGDRVSEFELTLIS 120
Query: 473 LDLEHLGIPETEYS 514
+D + L IPET +S
Sbjct: 121 IDQDSLQIPETSFS 134
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 135 bits (327), Expect = 5e-31
Identities = 56/132 (42%), Positives = 92/132 (69%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M E RL LKK+L+A++DL+ +A +C + G+ LQAMD +HV+LVS+ L A+GF+KY
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDTAHVALVSMNLNANGFEKY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
C +N S+G+NLG++ KILKC + D +T++ ++ + F FE+ + ++ +++M LM+
Sbjct: 61 NCAQNTSLGVNLGAIQKILKCGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMD 120
Query: 473 LDLEHLGIPETE 508
+ EHL IP+ E
Sbjct: 121 ISSEHLSIPDAE 132
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 134 bits (325), Expect = 9e-31
Identities = 59/135 (43%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEA+ + KK++EAIK+L+ + + GI LQAMD SHV+LV+L L GF KY
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDTSHVALVALQLNEKGFKKY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQ-DNADNVTFVFESPNQEKVSDYEMKLM 469
RC+++++MG+++ ++ KILKC+G+ D +T++ Q + ++F FES N ++S++++ LM
Sbjct: 61 RCEKSLTMGLSIENLQKILKCSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLM 118
Query: 470 NLDLEHLGIPETEYS 514
+LD E LG+P+T+YS
Sbjct: 119 SLDQEQLGVPDTDYS 133
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 132 bits (320), Expect = 3e-30
Identities = 56/133 (42%), Positives = 95/133 (71%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EA++ +S+ K+++E I L+ +A FDC+ G+ +QAMD+SHV+LV + LR D F KY
Sbjct: 1 MLEAQVQYASLWKRLVECINGLVNEANFDCNPGGLSIQAMDSSHVALVHMLLRDDCFVKY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
+C+RNI +G+NL S+SK+LK D+++++ D++D VT E+P + + +Y++KL+
Sbjct: 61 QCERNIILGLNLASLSKVLKIVDGNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLE 120
Query: 473 LDLEHLGIPETEY 511
++ E +GIPE +Y
Sbjct: 121 IEAESMGIPEMDY 133
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 131 bits (317), Expect = 8e-30
Identities = 57/132 (43%), Positives = 94/132 (71%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EA+L +S+L+++ E+IKD+++ DCD+ G++LQAMD+SHV+LV+L L GF +
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQAMDSSHVALVALKLDDAGFVHF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDR +G+NL S+ K+ K + D+ +I+ ++++D VTFVFE+ EK+S + ++LM
Sbjct: 61 RCDRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMA 120
Query: 473 LDLEHLGIPETE 508
+D + L +PE E
Sbjct: 121 IDQDALRVPEDE 132
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 130 bits (315), Expect = 1e-29
Identities = 63/132 (47%), Positives = 87/132 (65%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M E R ++ S+LKKV E IK+ + F C GI +QAM NS++S+++L L + GF+ Y
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAM-NSNLSILALVLHSSGFEHY 59
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCD N SMGMNL SM ++L A D +TIKA D D VTF FESP Q ++S++EM+L++
Sbjct: 60 RCDHNFSMGMNLYSMVELLNRANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVD 119
Query: 473 LDLEHLGIPETE 508
+D I E E
Sbjct: 120 IDSPRYWIREDE 131
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 127 bits (307), Expect = 1e-28
Identities = 58/134 (43%), Positives = 98/134 (73%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M A+L +S+LKK+++A+KDL++ A + ++G+ LQAMD+SHVSLVSL + + F+ Y
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQAMDSSHVSLVSLIIPPEEFEVY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
+C++ S+G+NL KILKCA ++D+V I ++N + +TF+F + E+ S+++++L+
Sbjct: 61 QCEKIQSLGINLNWFYKILKCATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLE 120
Query: 473 LDLEHLGIPETEYS 514
++ E LGIPET YS
Sbjct: 121 INNETLGIPETIYS 134
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 122 bits (294), Expect = 5e-27
Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 5/138 (3%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL + + KK+ EA+K+L DCD +G+ LQAMD+SHV+LVSL ++ D F+ Y
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQAMDSSHVALVSLNIQPDAFEHY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDT-VTIKA-QDNADN-VTFVFESPNQEKVSDYE-- 457
RCDR + +G+++ +SK +K DKDT +T+K DN DN +T FE N +S E
Sbjct: 61 RCDRPVVLGLDMQQLSKFMKFC-DKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECI 118
Query: 458 MKLMNLDLEHLGIPETEY 511
++LM+++ EH+ IPE EY
Sbjct: 119 LRLMDIEQEHISIPEEEY 136
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 121 bits (292), Expect = 9e-27
Identities = 50/133 (37%), Positives = 89/133 (66%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EA+ +S+ K++++ KD + F C ++GI QA+D+S V LVSL + + F +Y
Sbjct: 1 MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCD +++GM+L S+SKIL+C + DT+T+ A + D++ +FE ++++++Y +KLM+
Sbjct: 61 RCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMD 120
Query: 473 LDLEHLGIPETEY 511
+D + L I E +Y
Sbjct: 121 IDADFLKIEELQY 133
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 113 bits (273), Expect = 2e-24
Identities = 50/101 (49%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Frame = +2
Query: 215 IQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQD 394
+ LQAMD+SHV+LVSL L FD YRCDR I++G++L +MSK LKCA + DT +K ++
Sbjct: 1 MSLQAMDSSHVALVSLKLEVGLFDTYRCDRTINLGLSLANMSKALKCANNDDTCMLKYEE 60
Query: 395 N-ADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYS 514
N D++ F F P ++K D +K+M++D EHLGIP+ +Y+
Sbjct: 61 NEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYA 101
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 111 bits (267), Expect = 9e-24
Identities = 46/130 (35%), Positives = 85/130 (65%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M E +L + +L+++ + ++D+++ D D G+ LQA+D +HV+LV L L GF Y
Sbjct: 1 MLELKLNHAVVLRRIFDCMRDIISDGNIDFDATGMSLQALDGNHVALVHLKLHESGFSLY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDR ++G+NL S++K K + D+V I++++ D ++F+FE+ ++V + +KLM+
Sbjct: 61 RCDRPRALGINLNSVTKAFKSCSNHDSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMS 120
Query: 473 LDLEHLGIPE 502
++ + L IPE
Sbjct: 121 IEQDALSIPE 130
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 109 bits (261), Expect = 5e-23
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFE R+ KK+ E +KD+ T+ +CD+NGI++Q+MD SHVSLV L + +D F Y
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQSMDCSHVSLVDLNIVSDFFQHY 59
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTF---VFESPNQEKVSD---Y 454
RCD+N +G+++ M KIL +K TV + +DN ++ + + Q D
Sbjct: 60 RCDKNCVLGISINFMLKILSVIKEKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEI 119
Query: 455 EMKLMNLDLEHLGIPETEY 511
++KL+N EHL IP++EY
Sbjct: 120 QVKLINAQKEHLEIPQSEY 138
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 101 bits (241), Expect = 1e-20
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = +2
Query: 116 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 295
F A+ +++ K+V+E++K + + FDC D GI +Q MDNSHVSLVSL + D FD+++
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEFQ 63
Query: 296 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 475
C + I++G+NL +SKILK A D D I D+ S K + + L+++
Sbjct: 64 CLKPITLGINLTHLSKILK-ALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFGLNLVDI 122
Query: 476 DLEHLGIPETE 508
+ E + IPE +
Sbjct: 123 EAESVEIPELQ 133
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 100 bits (240), Expect = 2e-20
Identities = 43/132 (32%), Positives = 84/132 (63%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFE + + +L++V+E I +L+ + FDC +NG+ +QAMD++HV L ++ L DGF Y
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINLLRDGFLHY 59
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
C + + + + + KIL C+G DT T++ + + +FE+P ++++D+E+ L++
Sbjct: 60 DCSQPLVIDIPIDKFKKILACSGPDDTFTLRF-NGGSVLLIMFETPAHDRITDFELNLLD 118
Query: 473 LDLEHLGIPETE 508
++ + + +PE E
Sbjct: 119 IEQDAMSVPELE 130
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 98.3 bits (234), Expect = 9e-20
Identities = 49/141 (34%), Positives = 85/141 (60%), Gaps = 7/141 (4%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFE RL L+++ EA++++ + DC ++G+ +QAMDNSH+SL+ L L D F Y
Sbjct: 1 MFECRL-DGMFLRRLFEALREICNDVSIDCSEDGLSMQAMDNSHISLIHLCLAPDFFQLY 59
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTI-KAQDNADNVTFV--FESPNQEKVS----D 451
RCD ++G+N+ M KIL +K + + + D+ D V FV E+ ++ +
Sbjct: 60 RCDTPCTLGLNISFMLKILAVVREKSVIYLARGDDSEDPVLFVRIIEAGGYDEAESDALE 119
Query: 452 YEMKLMNLDLEHLGIPETEYS 514
++K+++++ EHL IP+ EY+
Sbjct: 120 AQVKMIDVEREHLDIPDCEYT 140
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 91.9 bits (218), Expect = 8e-18
Identities = 41/133 (30%), Positives = 81/133 (60%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M E ++S KK+++++K L+ +F C +G+ LQAMD SHVSL+S++L AD F+ Y
Sbjct: 1 MVEIVFEQASFFKKIIDSLKGLVEDISFKCTSDGMDLQAMDISHVSLISISLPADIFNTY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
C +++ N+ ++K+LK A D + I + +++T + +++K + + +K ++
Sbjct: 61 NCSEEMNLAFNVDVLNKVLKSASTDDYLKISTEKPNEDITIQLSTQSEDKNTRFNLKPVD 120
Query: 473 LDLEHLGIPETEY 511
++ + + IPE Y
Sbjct: 121 INGDAVSIPEHIY 133
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 84.6 bits (200), Expect = 1e-15
Identities = 40/132 (30%), Positives = 74/132 (56%)
Frame = +2
Query: 119 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 298
EA ++ + ++ A++ LLT ATFDCD +G++L ++D V+L L LR GF +Y C
Sbjct: 2 EATFATAAAFQSIVGALRGLLTHATFDCDAHGMRLHSLDVERVALADLRLRRAGFARYAC 61
Query: 299 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 478
+R +S + + + KI++ A +T++ D V +E+ + + ++LD
Sbjct: 62 ERKLSFSVPVRGLVKIVRTADPSAPLTMRVAARDDRVRLAYET--ARRAVSCTLAQISLD 119
Query: 479 LEHLGIPETEYS 514
+ LG+P+ EY+
Sbjct: 120 ADRLGVPDKEYT 131
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 78.6 bits (185), Expect = 8e-14
Identities = 33/134 (24%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
+F R L+ +++K + + +K++L GI++ A+D + VSLV L L ++ F++Y
Sbjct: 7 LFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFEEY 66
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN-VTFVFESPNQEKVSDYEMKLM 469
+C+ +G+N+ +M K+L+ AG D++ + N + + ++ + ++ + MKL+
Sbjct: 67 KCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLI 126
Query: 470 NLDLEHLGIPETEY 511
+D + + + E+
Sbjct: 127 EIDSVEIEVGDIEF 140
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 75.8 bits (178), Expect = 6e-13
Identities = 40/132 (30%), Positives = 70/132 (53%)
Frame = +2
Query: 116 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 295
F A+ S LK ++ AI L+ +ATF GI + MD SHV+L+ ++ F+KY
Sbjct: 3 FSAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEKYE 62
Query: 296 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 475
CD NI G+ + +K++K A KD++TI + D++ + N++ Y+++L+
Sbjct: 63 CDSNIKFGVRIDEFTKLIKRADKKDSITISV--SKDSMLLIDIGSNKK----YKIRLIES 116
Query: 476 DLEHLGIPETEY 511
+P+ Y
Sbjct: 117 SATDTPLPKISY 128
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = +2
Query: 116 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 295
FE + LKK+ E + L+ D+G+ ++ +DN ++L+SL L F +R
Sbjct: 8 FELTFRDAGTLKKIFETLVPLVKDTPVSITDHGLSIETIDNGRIALISLHLPTQFFKNFR 67
Query: 296 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN-ADNVTFVFESPNQEKVSDYEMKLMN 472
C+R S+G+ S K++K + D VT+ + N +D + + ES + ++ ++L
Sbjct: 68 CERACSLGVRTASFLKVIKFCSNDDLVTLSQRSNSSDQLDILVESRKYSQTMNFSLRLFR 127
Query: 473 LDLEHLGIPETEY 511
D + + + E+
Sbjct: 128 SDADQIDVIRPEF 140
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/120 (27%), Positives = 74/120 (61%)
Frame = +2
Query: 152 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 331
K+ E++KDLL+++TF+ +N + +Q++D+SH++L+ + ++AD F+ ++ +N
Sbjct: 14 KLFESMKDLLSESTFEFKENFLTIQSIDHSHITLLEVDIQADYFENFKEFVGTKFKINFQ 73
Query: 332 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 511
+ K LK + ++D+V +K + + + VFE+ ++++YE+ L E + +P +Y
Sbjct: 74 GLIKALKTSTNEDSVMMKYDETTNFFSLVFEN-KDSRIAEYELNLFKSIKEKITVPVDKY 132
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/134 (23%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
+F R ++ S++K + + +K++L + +G+++ AMD + VSLV + L A+ F++Y
Sbjct: 36 LFCIRTVQGSVIKSLFDTLKEILHDVSITFSPSGVKISAMDGAKVSLVHMKLDAEAFEEY 95
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMKLM 469
C+ +G+N+ ++ K+L+ G +D++ + + N + ++ + + + +KL+
Sbjct: 96 VCNNTYEIGVNVTNLFKLLRTTGSRDSIMFRYLKSNPHVLEITIQNFEKNSTTQFFLKLI 155
Query: 470 NLDLEHLGIPETEY 511
+D + I + E+
Sbjct: 156 EIDSACIDINDLEF 169
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 72.1 bits (169), Expect = 7e-12
Identities = 33/124 (26%), Positives = 66/124 (53%)
Frame = +2
Query: 140 SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 319
S++K++LE++ +++ A + G+ +Q MD +HV+ + L + F KYRCDR + +G
Sbjct: 22 SLMKRILESLSEIVETADIKATEKGLSIQVMDVTHVAFADIFLSSTMFTKYRCDRELVIG 81
Query: 320 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 499
+ L ++ KI+K + T + + + + + V +++KL D E IP
Sbjct: 82 VQLKTLIKIIKGMSVEGGGTFRMECDDATTNLNIRNTREGNVLSFKLKLFTSDSEAYNIP 141
Query: 500 ETEY 511
E ++
Sbjct: 142 EFDF 145
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 71.7 bits (168), Expect = 9e-12
Identities = 34/128 (26%), Positives = 64/128 (50%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEA+ KK +E I+ ++ ++ + GI +Q D S +S + LT+ + F +
Sbjct: 1 MFEAKFKNPIAFKKAMEVIETVVEFSSLEVTSEGISMQCSDTSRISFIKLTMMKEAFKSF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
+N+S+ + + + KILK D +TI + +N + F+ + + YE KL +
Sbjct: 61 TFTKNLSLSVKMSGLCKILKTCTDASVLTIWSGENDSHDYLNFKIKTGKSLKSYEYKLYH 120
Query: 473 LDLEHLGI 496
D + G+
Sbjct: 121 FDSQDYGM 128
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 71.7 bits (168), Expect = 9e-12
Identities = 40/133 (30%), Positives = 71/133 (53%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MF+A L +IL+ +AI ++ + G++L A+D SH++ V L L+A+ FD+Y
Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
CD + ++ + K+LK A D V + + N+ FE E V ++++L++
Sbjct: 61 VCDEPERINVDTEELMKVLKRAKANDRVILSTDEG--NLIIQFEG---EAVRTFKIRLID 115
Query: 473 LDLEHLGIPETEY 511
++ E PE EY
Sbjct: 116 IEYETPSPPEIEY 128
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 68.5 bits (160), Expect = 8e-11
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Frame = +2
Query: 161 EAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMS 340
E +K+++T C+ +GI L +MD SHV++V + L D F KYRCDR + +G+++ ++
Sbjct: 1 ECLKEMVTDVNLVCNASGISLDSMDGSHVAVVDVRLAVDLFHKYRCDRPVQLGLSVPNLL 60
Query: 341 KILKCAGDKDTVTIKA-------QDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGI 496
L+ +T+ + D D + + E P E++L++++ E L +
Sbjct: 61 LALQPVKSAETLVHLSSLHGDDEDDEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEV 120
Query: 497 PE-TEY 511
PE TE+
Sbjct: 121 PEHTEH 126
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 67.3 bits (157), Expect = 2e-10
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 107 INMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFD 286
+ MF + +KK+ DL+ A + G+ +Q+MD SHVSLV+L + F
Sbjct: 13 LQMFTIVSDAAETIKKLFVVFNDLVDIANLSFTNEGLSVQSMDTSHVSLVNLKIGKSYFK 72
Query: 287 KYRCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMK 463
Y + ++G+ + + +IL C G+ D +TI DN D + + + SD++MK
Sbjct: 73 DYSIAQEATVGIKISNFVRILDCVGN-DEITISFTYDNPDELIV------KSEYSDFKMK 125
Query: 464 LMNLDLEHLGIPETE 508
++++ E + IPE +
Sbjct: 126 TIDIETEEMEIPEMD 140
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 66.5 bits (155), Expect = 3e-10
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +2
Query: 149 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 328
KKV+ A +L+ + F+ D+NGI+ AMD SHV+LVS+ + D F++Y D +G++L
Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDL 70
Query: 329 GSMSKIL-KCAGDKDTV-TIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 502
++ KI+ + GD+ + + + N N+TF + ++ Y++ NL + + P
Sbjct: 71 EALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSNLKVPDIEYPN 130
Query: 503 T 505
+
Sbjct: 131 S 131
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 58.4 bits (135), Expect = 9e-08
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 143 ILKKVLEAIKDLLTQATFDCD-DNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 319
I + ++ AI ++ + F D + G +AMD SHV ++++ D F+ + D + +G
Sbjct: 10 IWRYIVSAISKVIEEGVFVVDPEEGFLFRAMDPSHVIMLNMRFPRDSFEVFEVDSKVELG 69
Query: 320 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 499
+N ++K+L+ A +D + I + N V+F F K + + L+++ E L P
Sbjct: 70 VNFEDVAKVLRRASKEDKLEITSDGN--TVSFAFIGKGYRK---FTLPLLDITAEELPEP 124
Query: 500 ETEY 511
+ E+
Sbjct: 125 QLEF 128
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 152 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 331
++++ L+ +A F ++GI ++AMD S V L+ L L + F KY ++G+N+
Sbjct: 15 QLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNMD 74
Query: 332 SMSKILKCAGDKDTVTI-KAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHL 490
+ KILK KDT+ + K ++N +T + +V +++ M +DL L
Sbjct: 75 HLKKILKRGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDLPEL 128
>UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1;
Metallosphaera sedula DSM 5348|Rep: DNA polymerase
sliding clamp - Metallosphaera sedula DSM 5348
Length = 245
Score = 56.0 bits (129), Expect = 5e-07
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +2
Query: 149 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 328
K V+EA+ L+ + TF +G+ + A+D +H+SL+ L + F+++ + G N
Sbjct: 12 KTVIEALSKLIDEVTFTFTSSGLDVVAVDRAHISLIKLHFPKEAFEEFDVEDQFRFGFNT 71
Query: 329 GSMSKILKCAGDKDTVTIKAQDNADNV-TFVFESPNQEKVSDYEMKLMNL 475
M K++ A K+ + +++++ ++ V + E P + + + E+ + L
Sbjct: 72 QYMLKVMASAKRKEKIEMESREESEIVIRMLGEPPREFTIRNIEVPIQEL 121
>UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6;
Sulfolobaceae|Rep: DNA polymerase sliding clamp 1 -
Sulfolobus acidocaldarius
Length = 247
Score = 55.2 bits (127), Expect = 8e-07
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Frame = +2
Query: 146 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 325
LK ++E + + + F+ +GI+L A+D +HVSL+++ L + F +Y + G N
Sbjct: 11 LKNIVETLTKFIDEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFN 70
Query: 326 LGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESP-------NQEKVSDYEMKLMNLDLE 484
++KIL A K+ ++I++ D+ + V N +VS E+ +NL+ E
Sbjct: 71 SQYLAKILSIAKRKEEISIES-DSPERVKITLGGALNRVFIINNIQVSPPEVPEVNLEFE 129
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/64 (50%), Positives = 36/64 (56%)
Frame = -1
Query: 300 SQRYLSKPSARRVSDTRDT*ELSIACN*IPLSSQSKVACVSRSLIASKTFFKIELRSKRA 121
S Y KPSA +DT T E+SI C P SQSKVAC SRSL S + FK A
Sbjct: 10 SHLYFLKPSACSCNDTSATCEVSITCMLTPRLSQSKVACGSRSLKVSTSLFKTAPVLNSA 69
Query: 120 SNMF 109
SN+F
Sbjct: 70 SNIF 73
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/83 (27%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 155 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY-RCDRNISMGMNLG 331
+++A+ L+ ++ +G++L+A+D S ++V L + FD+Y +++I++G+N
Sbjct: 64 IMDAVAVLVEESALTVTKDGVKLRALDPSRTAMVDLYMPRTAFDEYPDVEQDINIGVNFS 123
Query: 332 SMSKILKCAGDKDTVTIKAQDNA 400
+ KIL+ AG +VT + ++N+
Sbjct: 124 EVKKILQRAGKGSSVTFEVEENS 146
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 52.4 bits (120), Expect = 6e-06
Identities = 30/118 (25%), Positives = 62/118 (52%)
Frame = +2
Query: 155 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 334
+L+AI ++ + NG++ A+D +HV+L+ + L + F +Y + + +G N+ +
Sbjct: 17 MLDAISKIVDELAMTITPNGVKAIALDPAHVALMVMELPPESFIEYEVEDEVKLGFNVAN 76
Query: 335 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 508
++KI+K D + I+ + D VT+ ++ +L+NLD+ +PE E
Sbjct: 77 IAKIIKRGKKGDKLDIEVDE--DRVTWSIVGATIKR-----YRLLNLDVPVPELPEAE 127
>UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp
subunit A; n=1; Ignicoccus hospitalis KIN4/I|Rep: DNA
polymerase sliding clamp subunit A - Ignicoccus
hospitalis KIN4/I
Length = 248
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Frame = +2
Query: 137 SSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISM 316
+ I + +++AI ++ + G++++A+D + V ++ + + AD F +Y + S+
Sbjct: 8 AKIFQSLVDAIGKIVDEVALVAKPEGVEMKAIDPAQVVMIRIYIPADAFSEYEVEEEESL 67
Query: 317 GMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES--------PNQEKVSDYEMKLMN 472
G N+G + K K A + + ++ + V E PN E VS+ L N
Sbjct: 68 GFNIGDILKFFKRAKKGYKLELGSEAEGSKIRIVLEGALIKKYVIPNLEVVSEELPDLSN 127
Query: 473 LDLE 484
LD +
Sbjct: 128 LDFK 131
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 50.4 bits (115), Expect = 2e-05
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +2
Query: 104 NINM-FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADG 280
N+N+ F+ + +KK+ + +L ++G+++Q MD SHV+L ++ +
Sbjct: 27 NMNLGFKVSCQDTDAVKKIFALLDELNDDVNLMFTEHGLKIQTMDTSHVALSTVKISKGF 86
Query: 281 FDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEM 460
F +Y + ++G+ + +M ++L C D ++D DN+ + S Q ++ +
Sbjct: 87 FTEYVVPQFTTIGIKISTMIRVLGCI-DGGFSFEYSEDTPDNL--IVRSDTQ----NFML 139
Query: 461 KLMNLDLEHLGIPETEY 511
++LD E + P+ EY
Sbjct: 140 NTIDLDSEEMEAPDAEY 156
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 49.2 bits (112), Expect = 6e-05
Identities = 30/123 (24%), Positives = 60/123 (48%)
Frame = +2
Query: 143 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGM 322
I++K L + +L + G+++ AMD HVSL ++ FD Y + +G+
Sbjct: 25 IMRKALALLSELSDDVNITFAEQGMKIVAMDTGHVSLTAVKFAKGMFDVYSLGKETVIGV 84
Query: 323 NLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 502
+ ++ K+L C D T + ++ D F + + +++M L++LD E + IP
Sbjct: 85 KVSNLVKVLSCV-DGPTSFVYDEETPD--FFNISTTH----GNFKMGLIDLDSEEMLIPH 137
Query: 503 TEY 511
++
Sbjct: 138 MDF 140
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/116 (23%), Positives = 59/116 (50%)
Frame = +2
Query: 158 LEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSM 337
+ AI ++ + + +NGI+L+A+D S + +V + +G +Y D+ ++G+N+ +
Sbjct: 15 MNAIGKIIDEGAYKIQENGIRLRAIDPSRIVMVDFYIPREGLLEYEFDKEETIGVNMEDL 74
Query: 338 SKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPET 505
+KIL+ A D + ++ + A + +F ++ + +L L IP T
Sbjct: 75 TKILRRAVKGDELELRTLE-AGRLAVIFLGRGTRMFIIPSLETIAEELPELKIPFT 129
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 47.6 bits (108), Expect = 2e-04
Identities = 17/79 (21%), Positives = 46/79 (58%)
Frame = +2
Query: 146 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 325
LK++ + + ++++A F D+NG+ + A+D +HV+++ L + + F ++ D + ++
Sbjct: 11 LKEITDLLSTIVSEAKFRVDENGMSVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIALD 70
Query: 326 LGSMSKILKCAGDKDTVTI 382
+ + +++ A + V I
Sbjct: 71 IDRLKSVIRLASSSENVGI 89
>UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1;
Thermofilum pendens Hrk 5|Rep: DNA polymerase sliding
clamp - Thermofilum pendens (strain Hrk 5)
Length = 247
Score = 46.0 bits (104), Expect = 5e-04
Identities = 19/79 (24%), Positives = 45/79 (56%)
Frame = +2
Query: 149 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 328
K ++E++ ++ +A F G++L+A+D +++V L + ++ F++Y D+ + L
Sbjct: 13 KYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEYSVDQETKISAVL 72
Query: 329 GSMSKILKCAGDKDTVTIK 385
+ K+LK A D ++ +
Sbjct: 73 DDIDKVLKRAKSDDKISFE 91
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/135 (22%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = +2
Query: 116 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 295
F A + K A ++ +A +NGI +AMD SH+++ L + + FD+Y
Sbjct: 4 FRAYQEEARYFKYAFNAAGKVVEEAPLIVTENGIVSRAMDASHIAMAVLEMPWEMFDEYE 63
Query: 296 CDRN-ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
+ + G+++ +++I++ A D +T++ +D + V S E+ E +L +
Sbjct: 64 PPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDE-EEVIIKLGSSGYER----EFRLRS 118
Query: 473 LDLEHL-GIPETEYS 514
+D++ + PE +++
Sbjct: 119 IDIDDIPDEPELDFA 133
>UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4;
Pyrobaculum|Rep: DNA polymerase sliding clamp A -
Pyrobaculum aerophilum
Length = 249
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/102 (19%), Positives = 53/102 (51%)
Frame = +2
Query: 155 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 334
++++I L+ +A F ++G+ L+A+D S ++V L + + F+++ + G+N
Sbjct: 17 IIDSISVLVEEANFLIRNDGLYLRALDVSRTAMVDLAIPKESFEEFPEVEELRFGLNFKE 76
Query: 335 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEM 460
+ K+L+ D ++++ ++ + + +S V E+
Sbjct: 77 LKKLLRRVKKGDKISMEFEEGRVRIKLIGKSVRSIVVPSIEV 118
>UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B2 -
Aeropyrum pernix
Length = 249
Score = 40.7 bits (91), Expect = 0.019
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 155 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC-DRNISMGMNLG 331
++ +I+ ++ + F G+ L+A+D SHV++V L F +Y ++ G++
Sbjct: 17 MVASIEKIIEEGVFVATGEGLSLRALDTSHVAMVDLYYPNTAFIEYDIGGESVEFGVSFD 76
Query: 332 SMSKILKCAGDKDTVTIKAQ 391
+SK+L+ A +D + ++ +
Sbjct: 77 LLSKVLRRARKEDELVLEVE 96
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 37.9 bits (84), Expect = 0.14
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 146 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC--DRNISMG 319
LKK++ + DL+++ F + GI+L AMD + +++V ++ + F Y D+ I +
Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDYTIEGDKEI-IT 69
Query: 320 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 499
+++ + I+K ++ V + D N + +K + + L+ + IP
Sbjct: 70 VSMDDLKTIVKKLKQREMV-VWETDREKNKLKILARGTIKKT--FSIPLLEGEETETPIP 126
Query: 500 ETEYS 514
EY+
Sbjct: 127 SLEYN 131
>UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L823 - Mimivirus
Length = 323
Score = 37.5 bits (83), Expect = 0.18
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 NMFEARLLRSSILKKVLEAIKDLLTQATF---DCDDNG--IQLQAMDNSHVSLVSLTLRA 274
N+ E + +LKK+L I ++ ++ F + ++ G I + DN + L+ L L+
Sbjct: 68 NILEIVTTKIDVLKKILRLIGEVTSECQFSFQNVNEGGRIIVTELHDNKTI-LLKLVLKG 126
Query: 275 DGFDKYRCDRN-ISMGMNLGSMSKILKCAGDKDTVT 379
GFD Y+C ++ I+ + L + + L G DT T
Sbjct: 127 TGFDFYKCSKSKITARLYLPDIDEALGLIGVDDTNT 162
>UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 247
Score = 35.9 bits (79), Expect = 0.55
Identities = 21/90 (23%), Positives = 43/90 (47%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MF A S ++ +I + + T + + GI + + + V + + + D ++Y
Sbjct: 1 MFRAIYGSSRDFYYIVSSISKISDELTLNFTEEGIGSKYLTDDKVMMGVVEIGKDALEEY 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTI 382
++ IS+ +NLG + KIL + +V I
Sbjct: 61 SIEKPISVKLNLGELKKILSKMKGRSSVEI 90
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 35.5 bits (78), Expect = 0.72
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 DGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFV-FESPNQEKVSD 451
D F K+R +N+ +++G C D + +K ++ N+T + F + NQEK+S
Sbjct: 59 DSFSKFRGFKNV---LDIG-------CGAGSDLLVVKKYNDKANLTGIDFGNWNQEKLSK 108
Query: 452 YEMKLMNLDLEHLGIP 499
+ L+NLD+E +P
Sbjct: 109 NNINLINLDIEKDKLP 124
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 35.5 bits (78), Expect = 0.72
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = -1
Query: 210 LSSQSKVACVSRSLIASKTFFKIELRSKRASNM 112
+ S SK+A V+RSL S+TF +I KRASNM
Sbjct: 59 VGSASKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13;
Actinomycetales|Rep: Substrate--CoA ligase, putative -
Mycobacterium tuberculosis
Length = 1168
Score = 35.1 bits (77), Expect = 0.96
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 305 SYRSGTCQSHQLGE*VTRETHESCP*PVTEFHC 207
SY +G S GE + RE HE C PVT F C
Sbjct: 941 SYANGYANSKWAGEVLLREAHEQCGLPVTVFRC 973
>UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 161
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 137 SSILKKVLEAIKDLLTQA--TFDCDDNGIQLQAMDNSHVSLVSLTLRAD 277
S L+K+ ++DLLTQA T D + + L A++ + SL SLT + D
Sbjct: 53 SETLQKLTAKVRDLLTQALPTHDMEALSVSLDALEPTQTSLSSLTAQID 101
>UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 898
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 332 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYE 457
S+ LK G DT+ K+ DNA+NV F+ Q ++D E
Sbjct: 855 SIYNTLKTKGKVDTLYFKSYDNAENVAFLMRQSKQRILADVE 896
>UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5;
Methanosarcina|Rep: Geranylgeranyl reductase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 402
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 254 VSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPN 433
++L + FD + D+ G+++ S K+L C ++ V ++ N FV +
Sbjct: 99 IALLVSRKAFDNFLLDKARETGIDIHSGEKVLDCEEGEECVEVRTSQNTYLAKFVLIAEG 158
Query: 434 QEKVSDYEMK 463
E V Y ++
Sbjct: 159 SEGVLKYSVR 168
>UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 169
Score = 33.5 bits (73), Expect = 2.9
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 248 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES 427
S++ L +RA GF ++ + N M+ ++ GD + K++D N+T+V
Sbjct: 3 SVLRLAMRAKGFSRFLAETQAFPVKNRHFMTSSVRKTGDFEYEDPKSEDEVVNITYVLRD 62
Query: 428 PNQEKV 445
+ K+
Sbjct: 63 GTERKI 68
>UniRef50_Q4UH03 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 2579
Score = 32.7 bits (71), Expect = 5.1
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 62 LLLIFNKIIEVIH*NINMFEARLLRSSILKKVLEAIKDLLTQ 187
+LL+F++I+ N ++F ++ SILK+VLE I LLT+
Sbjct: 430 ILLVFSRILH----NKDIFHPLIVNPSILKRVLECIDSLLTE 467
>UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBR089W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 199
Score = 32.7 bits (71), Expect = 5.1
Identities = 33/105 (31%), Positives = 43/105 (40%)
Frame = -1
Query: 423 SKTNVTLSALSCAFIVTVSLSPAHLRIFDMLPRFMPIEMFLSQRYLSKPSARRVSDTRDT 244
S + S + A V VS+ RI R +P S Y K S +T T
Sbjct: 92 SNNKMMESGVLSAISVNVSVLLPQRRILLSEVRSIPNVTGWSHLYSWKASTPISKETNRT 151
Query: 243 *ELSIACN*IPLSSQSKVACVSRSLIASKTFFKIELRSKRASNMF 109
E S AC IP S K+ ++SL S K + S ASN+F
Sbjct: 152 LESSTACAMIPSSLHWKLTNWTQSLKPSIILLKRDASSNFASNIF 196
>UniRef50_A3DBG8 Cluster: Ig-like, group 2 precursor; n=1; Clostridium
thermocellum ATCC 27405|Rep: Ig-like, group 2 precursor -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 4630
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 305 NISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEM 460
++ GM LGS +K+ AGD + T+ N +V + + P S Y++
Sbjct: 962 SLPSGMTLGSDTKVTVYAGDSYSTTVTIPKNGSSVEYAIKVPPNSAGSGYKV 1013
>UniRef50_A7T299 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1047
Score = 32.3 bits (70), Expect = 6.8
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +2
Query: 92 VIH*NINMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLR 271
+IH NIN + +L +L K L + LT+ D QL A++ H+
Sbjct: 39 LIHLNINSCQNKLDELLLLNKELRSHVIFLTETKIDSSYTNDQL-ALEGYHIYRKDRKKG 97
Query: 272 ADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFV--FESPNQEKV 445
G Y + S + L ++L + + I A N +NV FV + SPN
Sbjct: 98 GGGLMAYFSSKMASRKVKLPKQYRLL------EVLAINAIINNNNVLFVGIYRSPNPTG- 150
Query: 446 SDYEMKL 466
+DY KL
Sbjct: 151 TDYYRKL 157
>UniRef50_A7BBP5 Cluster: Putative uncharacterized protein; n=2;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 401
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 208 QWNSVTGYGQLSCVSRVTHSPS*WL*QVPLR*EHLNGHESRQHVKD 345
+WN TGYG L + +T +P+ + + P + N SRQ V+D
Sbjct: 301 EWNEYTGYGALDIYAMLTTNPTSFPDENPFMDKGTNTVPSRQDVQD 346
>UniRef50_A5JZJ4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1426
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 341 KILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKL 466
+ILK G ++ IK ++N D T++F P +EK KL
Sbjct: 1013 QILKDDGAQELTFIKREENKDEETYIFHYPKKEKYDHLISKL 1054
>UniRef50_A1CN65 Cluster: Nonribosomal peptide synthase, putative;
n=1; Aspergillus clavatus|Rep: Nonribosomal peptide
synthase, putative - Aspergillus clavatus
Length = 4064
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -1
Query: 357 AHLRIFDMLPRFMPIEMFLSQRYLSKPSARRVSDTRDT*ELSIACN 220
AH R+ D +PRFM E+FL R L + +A ++ D R +L+ C+
Sbjct: 1858 AHGRLCDSMPRFMVPEVFLPVRALPQSAAGKL-DRRRLRDLARTCS 1902
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,848,477
Number of Sequences: 1657284
Number of extensions: 8415732
Number of successful extensions: 19794
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 19290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19778
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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