Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0086
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 100 6e-20
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 98 1e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 96 5e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 5e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 74 2e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 74 2e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 3e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 73 4e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 73 7e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 7e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 72 1e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 72 1e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 71 2e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 2e-11
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 2e-11
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 70 4e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 70 4e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 70 4e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 5e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 5e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 9e-11
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 66 8e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 63 4e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 63 4e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 63 4e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 63 4e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 63 4e-09
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 62 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 4e-08
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 60 6e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 58 1e-07
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 58 2e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 57 3e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 57 4e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 9e-07
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 54 4e-06
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 51 2e-05
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 50 4e-05
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 50 6e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 1e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 47 4e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 47 4e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 46 7e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 46 0.001
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 45 0.001
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 42 0.009
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.012
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.021
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.027
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.084
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.084
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 38 0.19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.26
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 37 0.34
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.45
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 37 0.45
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 37 0.45
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 36 0.59
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 36 0.78
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 0.78
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 0.78
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 1.8
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 35 1.8
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 34 2.4
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 3.1
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 34 3.1
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.2
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 9.6
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 32 9.6
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 99.5 bits (237), Expect = 6e-20
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS R++N+S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 473 FDQLPLFV*AVGL 511
FDQ+PLFV AVG+
Sbjct: 175 FDQMPLFVWAVGI 187
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/64 (62%), Positives = 44/64 (68%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 237 NIRF 248
N+ F
Sbjct: 96 NMSF 99
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TAF AGAIT+LLTDRNLNTSF DPAGGGD
Sbjct: 187 ITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGD 224
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -1
Query: 268 KGGG*SQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 89
K GG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 88 PINDPGFPNSARIKSLKDVPIIPDQIPKI 2
PI PG PNSARIKSL DVP +P PK+
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKM 213
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = -2
Query: 504 TAHTNKGN*SNDILSNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG* 325
T TN G S I ++R I+E PAKC+EKI STD P CAI SGG
Sbjct: 47 TDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGY 106
Query: 324 TVHPVPAPFSTILLEINNIREGG 256
TVHPVP P STI L + ++EGG
Sbjct: 107 TVHPVPTPLSTIPLNKSKVKEGG 129
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = -3
Query: 620 SPPPAGSRNDVFKFRSVNNIVIAPAKTGSDNNNKNAVT 507
SPPPAGS+ +VFKFRSV +IVIAPA TGS++N+K AV+
Sbjct: 8 SPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVS 45
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 96.3 bits (229), Expect = 5e-19
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS R++ +S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 473 FDQLPLFV*AVGL 511
FDQ+PLF+ AVG+
Sbjct: 151 FDQMPLFIWAVGI 163
Score = 79.4 bits (187), Expect = 6e-14
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 240 IRF 248
+ F
Sbjct: 73 MSF 75
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA AGAIT+LLTDRNLNTSF DPAGGGD
Sbjct: 163 ITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGD 200
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 237 NIRF 248
N+ F
Sbjct: 100 NMSF 103
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/71 (57%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS + IS
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 473 FDQLPLFV*AV 505
Q PLFV +V
Sbjct: 179 QYQTPLFVWSV 189
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A IT+LLTDRNLNT+F DPAGGGD
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 228
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 237 NIRF 248
N+ F
Sbjct: 99 NMSF 102
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS + I+
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 473 FDQLPLFV*AV 505
Q PLFV +V
Sbjct: 178 QYQTPLFVWSV 188
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S VTA A IT+LLTDRNLNT+F DPAGGGD
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 237 NIRF 248
N+ F
Sbjct: 99 NMSF 102
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/71 (56%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS + IS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 473 FDQLPLFV*AV 505
Q PLFV AV
Sbjct: 178 QYQTPLFVWAV 188
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
VTA A IT+LLTDRNLNT+F DPAGGGD
Sbjct: 190 VTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 237 NIRF 248
N+ F
Sbjct: 88 NMSF 91
Score = 72.9 bits (171), Expect = 6e-12
Identities = 40/71 (56%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS + IS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 473 FDQLPLFV*AV 505
Q PLFV AV
Sbjct: 167 QYQTPLFVWAV 177
Score = 36.7 bits (81), Expect = 0.45
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDP 606
+TA A IT+LLTDRNLNT+F DP
Sbjct: 179 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 240 IRF 248
+ F
Sbjct: 83 MSF 85
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS R +
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 473 FDQLPLFV*AV 505
+ + LFV +V
Sbjct: 161 IELVSLFVWSV 171
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S ++TA AGAIT+LLTDRN NTSF DPAGGGD
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGD 210
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.5 bits (170), Expect = 7e-12
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS R + +S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 473 FDQLPLFV*AV 505
++PLFV A+
Sbjct: 179 MHKMPLFVWAI 189
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 234 NNIRF 248
N+I F
Sbjct: 99 NSIGF 103
Score = 41.5 bits (93), Expect = 0.016
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TAF + IT+LL DRN NTSF + AGGGD
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGD 228
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 72.5 bits (170), Expect = 7e-12
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 237 NIRF 248
N+ F
Sbjct: 99 NMSF 102
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS + ++
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMT 177
Query: 473 FDQLPLFV*AV 505
Q PLFV +V
Sbjct: 178 QYQTPLFVWSV 188
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A IT+LLTDRNLNT+F DPAGGGD
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/71 (53%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S R ++
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 473 FDQLPLFV*AV 505
++PLFV AV
Sbjct: 97 PXRMPLFVWAV 107
Score = 52.8 bits (121), Expect = 6e-06
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA AGAIT+LLTDRN+NTSF DPAGGGD
Sbjct: 109 ITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGD 146
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 240 IRF 248
+ F
Sbjct: 84 MSF 86
Score = 33.1 bits (72), Expect = 5.5
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 359 GRSVDLAIFSLHLAGISS 412
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 237 NIRF 248
N+ F
Sbjct: 100 NMSF 103
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 240 IRF 248
+ F
Sbjct: 84 MSF 86
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/64 (48%), Positives = 36/64 (56%)
Frame = +2
Query: 302 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISFDQ 481
G GTG TVYPPLS + H G SVDL IFSLHLAG SS R + + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 482 LPLF 493
+ LF
Sbjct: 165 MSLF 168
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA AGAIT+LLTDRN+NTSF DP+GGGD
Sbjct: 174 ITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGD 211
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS R ++
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 473 FDQLPLFV*AV 505
++PLFV +V
Sbjct: 179 MSRIPLFVWSV 189
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 240 IRF 248
I F
Sbjct: 101 ISF 103
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA AGAIT+LLTDR NT+F DPAGGGD
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGD 228
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS R ++
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 473 FDQLPLFV*AV 505
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 234 NNIRF 248
NNI F
Sbjct: 98 NNISF 102
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
VTA AGAIT+LLTDRN NTSF DPAGGGD
Sbjct: 190 VTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGD 227
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS R ++
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 473 FDQLPLFV*AV 505
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 234 NNIRF 248
NNI F
Sbjct: 98 NNISF 102
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
VTA AGAIT+LLTDRN NTSF DPAGGGD
Sbjct: 190 VTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGD 227
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS R ++
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 473 FDQLPLFV*AV 505
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 234 NNIRF 248
NNI F
Sbjct: 98 NNISF 102
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/68 (54%), Positives = 43/68 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS R + ++
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 473 FDQLPLFV 496
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 234 NNIRF 248
NNI F
Sbjct: 99 NNIAF 103
Score = 40.3 bits (90), Expect = 0.036
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TAF + IT+LL DRN NTSF + +GGGD
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGD 228
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/68 (54%), Positives = 43/68 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS R + ++
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 473 FDQLPLFV 496
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 234 NNIRF 248
NNI F
Sbjct: 99 NNIAF 103
Score = 40.3 bits (90), Expect = 0.036
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TAF + IT+LL DRN NTSF + +GGGD
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGD 228
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.9 bits (161), Expect = 9e-11
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS R + ++
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 473 FDQLPLFV*AV 505
+LPLFV A+
Sbjct: 179 MHKLPLFVWAI 189
Score = 49.2 bits (112), Expect = 8e-05
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 234 NNIRF 248
NNI F
Sbjct: 99 NNIGF 103
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA + +T+LL DRN NTSF + AGGGD
Sbjct: 191 ITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGD 228
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 65.7 bits (153), Expect = 8e-10
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS R ++
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 473 FDQLPLFV*AV 505
+LPLFV +V
Sbjct: 181 MHRLPLFVWSV 191
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 234 NNIRF 248
NNI F
Sbjct: 101 NNISF 105
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S VTAF AGAIT+LLTDRN NT+F DPAGGGD
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGD 230
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS R + +
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 473 FDQLPLFV*AV 505
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 69 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 36.3 bits (80), Expect = 0.59
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A +T+LL DRN NTSF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS R + +
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 473 FDQLPLFV*AV 505
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 69 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 36.3 bits (80), Expect = 0.59
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A +T+LL DRN NTSF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS R + +
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 473 FDQLPLFV*AV 505
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 69 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 36.3 bits (80), Expect = 0.59
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A +T+LL DRN NTSF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS R + +
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 473 FDQLPLFV*AV 505
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 69 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 36.3 bits (80), Expect = 0.59
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S +TA A +T+LL DRN NTSF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 63.3 bits (147), Expect = 4e-09
Identities = 35/71 (49%), Positives = 40/71 (56%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS R I
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 473 FDQLPLFV*AV 505
+L LF AV
Sbjct: 179 LHKLILFAWAV 189
Score = 56.0 bits (129), Expect = 7e-07
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 60 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 237 NIRF 248
NI +
Sbjct: 100 NISY 103
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA AG IT++LTDRN NTSF + AGGGD
Sbjct: 191 ITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGD 228
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS R S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 473 FDQLPLFV 496
++PLFV
Sbjct: 186 MYRIPLFV 193
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 234 NNIRF 248
NNI F
Sbjct: 106 NNISF 110
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S VTAF AGAIT+LLTDRN NTSF D +GGGD
Sbjct: 195 SILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGD 235
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.1 bits (139), Expect = 4e-08
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS R +
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 473 FDQLPLFV*AV 505
++ +PLF AV
Sbjct: 184 YENVPLFAWAV 194
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 234 NNIRF 248
NNI F
Sbjct: 104 NNISF 108
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 547 AGAITILLTDRNLNTSFLDPAGGGD 621
A +T+ + DRN NTSF + AGGGD
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGD 233
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 234 NNIRF 248
NNI F
Sbjct: 98 NNISF 102
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +2
Query: 296 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISF 475
E G GTG TVYPPLSS +H G SVDL IFS HL GI S + + +
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 476 DQLPLFV*AVGL 511
LPLFV +V +
Sbjct: 183 KDLPLFVWSVAV 194
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 234 NNIRF 248
NN F
Sbjct: 102 NNFSF 106
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S VT+F A AIT+LL DRN NTSF DP GGGD
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGD 231
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 60 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 237 NIRF 248
NI F
Sbjct: 128 NISF 131
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 293 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRL 460
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS R
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRT 206
Query: 461 DNISFDQLPLF 493
I +L LF
Sbjct: 207 PGIKLHKLALF 217
Score = 38.7 bits (86), Expect = 0.11
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 556 ITILLTDRNLNTSFLDPAGGGD 621
IT++LTDRN NTSF + AGGGD
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGD 253
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/71 (45%), Positives = 37/71 (52%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
+ENG GTG T+YPPLS +H VDL IF LHL+GISS R I
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIK 204
Query: 473 FDQLPLFV*AV 505
+L LF AV
Sbjct: 205 LHKLALFGWAV 215
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 60 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 237 NIRF 248
N+ +
Sbjct: 126 NVSY 129
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA A AIT+LLTDRNLNTSF + AGGGD
Sbjct: 217 ITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGD 254
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 234 NNIRF 248
NNI F
Sbjct: 102 NNISF 106
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +2
Query: 332 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISFDQLPLFV*AV 505
PL+S+IAH G SVD+AIFSLHLAG+SS R ++ D++PLF+ AV
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAV 129
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 388
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 33.9 bits (74), Expect = 3.1
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 195 LILGAPDIAFPRINNIRF 248
L+LGAPD+AFPR+NN+ F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +2
Query: 299 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISFD 478
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS R ++
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 479 QLPLFV*AV 505
++PLFV +V
Sbjct: 223 KMPLFVWSV 231
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
S VTAF A AIT+LLTDRN T+F D AGGGD
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGD 270
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 99 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 234 NNIRF 248
NNI F
Sbjct: 104 NNISF 108
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
++ GAG G T YPP+S+ R+VD AIF++H++G SS R ++
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMT 283
Query: 473 FDQLPLFV*AV 505
++PLF +V
Sbjct: 284 LHKVPLFAWSV 294
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
VTA+ AGAIT+LLTDRN T+F DPAGGGD
Sbjct: 296 VTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGD 333
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 57 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 230
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 231 INNIRF 248
+NN+ +
Sbjct: 203 LNNLSY 208
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 234 NNIRF 248
N + F
Sbjct: 109 NALSF 113
Score = 34.3 bits (75), Expect = 2.4
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNIS 472
+ G G+ T YPPLS S+D I LH GI S R ++
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 473 FDQLPLFV 496
DQ+ +FV
Sbjct: 188 LDQISMFV 195
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+T+F AG++ LL DRN NTSF D GG+
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGN 237
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 302 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 33.5 bits (73), Expect = 4.2
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +3
Query: 63 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 242
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 243 RF 248
F
Sbjct: 91 SF 92
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 302 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 37.1 bits (82), Expect = 0.34
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 240 I 242
+
Sbjct: 102 L 102
Score = 33.9 bits (74), Expect = 3.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 547 AGAITILLTDRNLNTSFLDPAGGGD 621
A +T+LL DR+ +TSF P GGGD
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGD 230
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 75 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSF 105
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 508 VTAFXXXXXXXXXAGAITILLTDRNLNTSFLDPAGGGD 621
+TA AG +T++L DRN NTSF D GGGD
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGD 230
Score = 36.3 bits (80), Expect = 0.59
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +2
Query: 296 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISF 475
E G G G T+YP L H + D +F++HL GISS R SF
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSF 181
Query: 476 DQLPLFV 496
LF+
Sbjct: 182 LSWSLFI 188
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 510 YSILIIIITTCFSWSYYDIINRSKLKYII 596
YS III++TC WSYY+ IN SKLKYI+
Sbjct: 89 YSFTIIIVSTCSCWSYYNTINWSKLKYIL 117
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 240 IRF 248
I F
Sbjct: 181 IAF 183
Score = 33.1 bits (72), Expect = 5.5
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 305 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNI 469
A TG T+Y PLS N A+ G VDL + LHL+G+S+ R N+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 470 SFDQLPLF 493
S+ L +F
Sbjct: 264 SWANLDIF 271
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 234 NNIRF 248
NNI F
Sbjct: 99 NNISF 103
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 42.3 bits (95), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 240 IRF 248
+ F
Sbjct: 123 LSF 125
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 41.9 bits (94), Expect = 0.012
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.021
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 72 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 547 AGAITILLTDRNLNTSFLDPAGGGD 621
AGA+T+L D+ L T+F +PA GGD
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGD 183
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.027
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 293 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.084
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 60 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.084
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 302 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 37.5 bits (83), Expect = 0.26
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 547 AGAITILLTDRNLNTSFLDPAGGGD 621
A IT+LL DRN T+F +P+GGGD
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGD 317
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.9 bits (84), Expect = 0.19
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 60 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 233
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 234 NNIRF 248
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 37.5 bits (83), Expect = 0.26
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 237 NIRF 248
N+ F
Sbjct: 139 NLSF 142
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 37.1 bits (82), Expect = 0.34
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 240 IRF 248
F
Sbjct: 123 AAF 125
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.45
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 305 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 412
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.5 bits (73), Expect = 4.2
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 240 IRF 248
+ F
Sbjct: 95 LSF 97
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 36.7 bits (81), Expect = 0.45
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 296 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 412
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 99 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 242
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 36.7 bits (81), Expect = 0.45
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 57 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 237 NIRF 248
F
Sbjct: 124 AFGF 127
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 36.3 bits (80), Expect = 0.59
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 240 IRF 248
+ F
Sbjct: 114 VAF 116
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 35.9 bits (79), Expect = 0.78
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 305 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXRLDNISFDQL 484
AG G T Y PLS+N+ G L + ++ + G+SS R +++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 485 PLFV 496
PL +
Sbjct: 215 PLTI 218
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 102 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.9 bits (79), Expect = 0.78
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 96 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.9 bits (79), Expect = 0.78
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 34.7 bits (76), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 96 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 34.3 bits (75), Expect = 2.4
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 240 IRF 248
I F
Sbjct: 155 IAF 157
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 236
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 60 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 239
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 240 IRF 248
F
Sbjct: 119 FGF 121
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.2
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 412
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
Score = 33.1 bits (72), Expect = 5.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 99 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 248
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 9.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 256 TPLPYIINFKKNCRKWCRN 312
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.3 bits (70), Expect = 9.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 499 SCRVTAFXXXXXXXXXAGAITILLTDRNLNT 591
S +TA AGAIT+LLTDRN+NT
Sbjct: 171 SILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,900,563
Number of Sequences: 1657284
Number of extensions: 6096976
Number of successful extensions: 13299
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 12777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13260
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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