Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30087
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UAR2 Cluster: SfiI-subtelomeric related protein famil...    33   5.0  
UniRef50_Q7RG02 Cluster: Drosophila melanogaster CG15040 gene pr...    33   6.7  
UniRef50_A0RRN2 Cluster: Radical SAM; n=1; Campylobacter fetus s...    32   8.8  

>UniRef50_Q4UAR2 Cluster: SfiI-subtelomeric related protein family
           member, putative; n=2; Theileria|Rep: SfiI-subtelomeric
           related protein family member, putative - Theileria
           annulata
          Length = 1095

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 399 NFQCKFVCQADNIMS*HFNSNQIKSNQIKKFLFNINEKYILVERQKNYRQF 551
           N  C  V   +N++   FN N++K+N  K   FN   K IL++   N+R F
Sbjct: 286 NVCCTEVKYKNNVIW-KFNENELKNNFPKAIYFNTYAKMILLDLNNNWRYF 335


>UniRef50_Q7RG02 Cluster: Drosophila melanogaster CG15040 gene
           product; n=5; Plasmodium (Vinckeia)|Rep: Drosophila
           melanogaster CG15040 gene product - Plasmodium yoelii
           yoelii
          Length = 527

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 447 HFNSNQIKSNQIKKFLFNINEKYILVERQKN 539
           HF    I  NQ +KF+FNI  K IL  + KN
Sbjct: 210 HFFKKYITKNQKRKFIFNILNKRILKNKSKN 240


>UniRef50_A0RRN2 Cluster: Radical SAM; n=1; Campylobacter fetus
           subsp. fetus 82-40|Rep: Radical SAM - Campylobacter
           fetus subsp. fetus (strain 82-40)
          Length = 264

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -3

Query: 431 VSLTNKFTLKIDLNTV-----SHNFKSLSQPPGHDIEYIL 327
           ++L +KF LKIDL T       H+F  L +PP H I + L
Sbjct: 38  INLVSKFNLKIDLVTTGKMICDHDFDMLLKPPFHQISFSL 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,758,674
Number of Sequences: 1657284
Number of extensions: 7908975
Number of successful extensions: 17571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17547
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)