Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30127
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 155 9e-37
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 128 9e-29
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 113 4e-24
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 111 2e-23
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 108 1e-22
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 106 5e-22
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 101 2e-20
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 95 2e-18
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 92 9e-18
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 91 2e-17
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 87 4e-16
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 81 2e-14
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 77 4e-13
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 76 9e-13
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 73 6e-12
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 71 2e-11
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 71 3e-11
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 71 3e-11
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 70 4e-11
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 68 2e-10
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 66 7e-10
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 65 2e-09
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 64 4e-09
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 63 5e-09
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 60 4e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 60 5e-08
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 8e-08
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 57 3e-07
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 56 1e-06
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 56 1e-06
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 55 2e-06
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 55 2e-06
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 54 3e-06
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 49 1e-04
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.017
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 39 0.12
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.16
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.37
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.37
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.65
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.65
UniRef50_Q6LSH3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 35 1.5
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 2.0
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 2.0
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.6
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 34 2.6
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 4.6
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 6.1
UniRef50_Q8WRQ7 Cluster: Multiple ankyrin repeat single KH domai... 33 6.1
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 8.0
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 8.0
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 155 bits (376), Expect = 9e-37
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
TVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPG
Sbjct: 70 TVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPG 129
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
VTVVNS QKDELI+EGN +E V
Sbjct: 130 VTVVNSTAQKDELIVEGNDIESV 152
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 230
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 231 SKKELAAV 254
+KKELAAV
Sbjct: 61 TKKELAAV 68
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 606
SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 155 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 128 bits (310), Expect = 9e-29
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PG
Sbjct: 72 TICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPG 131
Query: 437 VTVVNSPKQKDELIIEGNSLE 499
V S QKDELI+EGN +E
Sbjct: 132 VACSVSQAQKDELILEGNDIE 152
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/70 (45%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 224
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 225 FGSKKELAAV 254
+G++KELA V
Sbjct: 61 WGNRKELATV 70
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 603
SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 157 SAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 113 bits (272), Expect = 4e-24
Identities = 50/81 (61%), Positives = 63/81 (77%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M G
Sbjct: 71 TAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEG 130
Query: 437 VTVVNSPKQKDELIIEGNSLE 499
VT++ S K KDEL+++GN +E
Sbjct: 131 VTILRSEKVKDELVLDGNDIE 151
Score = 77.0 bits (181), Expect = 4e-13
Identities = 33/73 (45%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 227
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 228 GSKKELAAVGQSV 266
G+++ +AA+ ++
Sbjct: 61 GTRRTMAAIRTAI 73
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 612
SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 156 SAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 111 bits (266), Expect = 2e-23
Identities = 48/86 (55%), Positives = 65/86 (75%)
Frame = +2
Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 421
AC + T+ S +ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+
Sbjct: 84 ACIK-TITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRI 142
Query: 422 KMAPGVTVVNSPKQKDELIIEGNSLE 499
++ G+T + K KDE+++ GNSLE
Sbjct: 143 ELLDGITCYRNEKAKDEIVLTGNSLE 168
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +3
Query: 96 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 254
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACI 86
Score = 40.7 bits (91), Expect = 0.030
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 603
S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 173 SCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 108 bits (260), Expect = 1e-22
Identities = 54/88 (61%), Positives = 66/88 (75%)
Frame = +2
Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 421
AC R +V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +
Sbjct: 66 ACIR-SVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVI 124
Query: 422 KMAPGVTVVNSPKQKDELIIEGNSLEDV 505
K PGVTV S KDE+I+EGNSLE+V
Sbjct: 125 KCLPGVTVSISSAVKDEIILEGNSLENV 152
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +3
Query: 54 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 233
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 234 KKELAAV 254
+K A +
Sbjct: 62 RKHNACI 68
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 603
SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 155 SAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 106 bits (254), Expect = 5e-22
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PG
Sbjct: 68 TICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPG 127
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
VT+ S KDELI+ G S+EDV
Sbjct: 128 VTIAMSTNVKDELILRGISIEDV 150
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +3
Query: 60 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 239
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 240 ELA 248
A
Sbjct: 62 RNA 64
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+AA I +S V NKD+RKFLDG YVS +
Sbjct: 153 TAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 101 bits (241), Expect = 2e-20
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +2
Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 421
AC R T + V NMIKGVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R +
Sbjct: 128 ACLR-TAQACVANMIKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNI 186
Query: 422 KMAPGVTVVNSPKQKDELIIEGNSLE 499
M GVT+ QKD++++EGN ++
Sbjct: 187 AMLEGVTIQEDKAQKDQVLVEGNDID 212
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 606
SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 217 SAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 161
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 101 bits (241), Expect = 2e-20
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMA 430
TV S V+NMI GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V +
Sbjct: 70 TVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVR 129
Query: 431 PGVTVVNSPKQKDELIIEGNSLEDV 505
GVT+ S KDE+++ GNS+EDV
Sbjct: 130 DGVTIEFSTNVKDEIVLSGNSVEDV 154
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 230
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 231 SKKELAAV 254
+K +AA+
Sbjct: 61 GRKHVAAL 68
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 612
+AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 157 NAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M G
Sbjct: 80 TIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDG 139
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
V V KDE+ +EGN +E V
Sbjct: 140 VVV--KKLGKDEICLEGNDVEKV 160
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = +3
Query: 72 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 224
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 225 FGSKKELAAV 254
+G++++ A V
Sbjct: 69 YGNRRDSAVV 78
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 612
SAA I + V+NKDIR+FLDG+YVSEK + D
Sbjct: 163 SAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 92.3 bits (219), Expect = 9e-18
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 427
TVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 70 TVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 230
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 231 SKKELAAV 254
+KE+AA+
Sbjct: 61 VRKEIAAI 68
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +2
Query: 233 QKGACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 412
+K + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK I
Sbjct: 63 KKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRI 122
Query: 413 RRVKMAPGVTVVNSPKQKDELIIEGNSL 496
R++ M GV + + +KDE+ + G+ L
Sbjct: 123 RKIYMGQGVKIKKNEAKKDEISVFGSDL 150
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 156 NAASIQQSCQAKNKDLRKFLDGIYIIMK 183
Score = 35.9 bits (79), Expect = 0.86
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 227
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 228 GSKKELA 248
KK+LA
Sbjct: 61 AGKKQLA 67
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 233 QKGACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 412
+K C+ +V S + NMI+GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 413 RRVKMAPGVTVV-NSPKQKDELIIEGNSLEDV 505
R +K PGVT+ N ++K+ L ++GN L +V
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQGNDLNNV 162
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 191
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQV 47
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+ ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 165 TCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PG
Sbjct: 70 TFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPG 127
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
VTV + E+I+EG E V
Sbjct: 128 VTV---KVRGQEIIVEGIDKEAV 147
Score = 35.9 bits (79), Expect = 0.86
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 72 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 248
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVA 66
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
TV S + N IK VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G
Sbjct: 89 TVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-G 147
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
V ++KD ++IEG SL DV
Sbjct: 148 AARVRLDERKDTIVIEGPSLSDV 170
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 209
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 210 KVEKWFGSKKELA 248
++ W G +K +A
Sbjct: 73 RIRLWNGKRKAMA 85
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PG
Sbjct: 70 TFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPG 127
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
VTV + E+ +EG E V
Sbjct: 128 VTV---KVKGSEIEVEGIDKEAV 147
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +3
Query: 72 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 251
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 252 V 254
V
Sbjct: 68 V 68
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +2
Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 397
AC R TVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 129 ACIR-TVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
Score = 52.8 bits (121), Expect = 7e-06
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +3
Query: 51 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVE 218
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V + R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 219 KWFGSKKELAAV 254
WFG K A +
Sbjct: 120 MWFGLTKNKACI 131
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + P
Sbjct: 69 GTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMP 126
Query: 434 GVTVVNSPKQKDELIIEGNSLEDV 505
G V +KD++I+EG L+ V
Sbjct: 127 GAKV---KIEKDDVIVEGIDLDAV 147
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 227
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 228 GSKKELAAVG 257
+KK+ A VG
Sbjct: 60 ATKKDYALVG 69
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +2
Query: 233 QKGACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 412
+K R GT+ V+NMI GVT G++YKM VY+HFPI +E + F+G K
Sbjct: 70 RKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEH 129
Query: 413 RRVKMAPGVTV-VNSPKQKDELIIEGNSLEDV 505
+ V GV + N KDE+ IEG +LEDV
Sbjct: 130 KIVTAPEGVRIWSNESVAKDEINIEGANLEDV 161
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 523 IQQSTTVKNKDIRKFLDGLYV 585
I Q T +K+KD+RKFLDG+YV
Sbjct: 168 IHQLTKIKDKDLRKFLDGIYV 188
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +3
Query: 54 KQIVANQKVKIPDGLTVHVKSRLVTV--KGPR----GVLKRNFKHLAVDIRM-VNPRLLK 212
+ ++ + KIP+ + VKS +VT+ + P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 213 VEKWFGSKKELAAVG 257
WFG++K LA +G
Sbjct: 63 ARCWFGNRKLLARIG 77
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 427
GT H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+
Sbjct: 87 GTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKI 142
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+
Sbjct: 65 GTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIE 122
Query: 434 GVTVVNSPKQKDELIIEGNSLEDV 505
GVTV DE+ I G E V
Sbjct: 123 GVTVKIG---NDEVTITGIDKEKV 143
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 72 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 251
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 252 VG 257
G
Sbjct: 64 TG 65
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 224
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 225 FGSKKELAAV 254
+G++KELA V
Sbjct: 61 WGNRKELATV 70
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 66.1 bits (154), Expect = 7e-10
Identities = 41/93 (44%), Positives = 55/93 (59%)
Frame = +2
Query: 221 MVRIQKGACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 400
+V++++ A R T+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N
Sbjct: 26 IVKVKELATVR-TICSHVQNMIKGVSLGFRYKVRSVYAHFPLNV---------------- 68
Query: 401 EKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 499
V+M GV S QKDELI+EGN E
Sbjct: 69 ------VQMRTGVACSVSQAQKDELILEGNDTE 95
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 603
SAALIQ++T V+N+DIRKF+DG+YVSEK T+
Sbjct: 100 SAALIQKATAVENQDIRKFVDGIYVSEKGTM 130
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+
Sbjct: 67 GTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL- 123
Query: 434 GVTVVNSPKQKDELIIEGNSLEDV 505
G T V +E+++ G + EDV
Sbjct: 124 GETKVK--VSGNEIVVSGINKEDV 145
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 78 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVG 257
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A VG
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/83 (33%), Positives = 54/83 (65%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK IRR K+ PG
Sbjct: 73 SIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPG 130
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
V V + +++++EG+ + +V
Sbjct: 131 VKVT---VKGEDIVVEGSDIYNV 150
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/67 (26%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 227
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 228 GSKKELA 248
+++ A
Sbjct: 63 ADRRKKA 69
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 63.3 bits (147), Expect = 5e-09
Identities = 37/84 (44%), Positives = 50/84 (59%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-H 120
Query: 434 GVTVVNSPKQKDELIIEGNSLEDV 505
G T V +EL + G +E V
Sbjct: 121 GDTDVEI--DGEELTVSGPDIEAV 142
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 145 TAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++
Sbjct: 68 GTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV- 124
Query: 434 GVTVVNSPKQKDELIIEGNSLEDV 505
G T V+ + D L + G S +DV
Sbjct: 125 GETQVS--VKGDRLFLNGPSKKDV 146
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/78 (39%), Positives = 49/78 (62%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + +
Sbjct: 73 GTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPK 130
Query: 434 GVTVVNSPKQKDELIIEG 487
GV V K K++++IEG
Sbjct: 131 GVKV--EVKGKEDIVIEG 146
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 215
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 216 EKWFGSKKELAAVG 257
E + K+E A +G
Sbjct: 60 EVFKARKREYAILG 73
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +2
Query: 266 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 445
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 446 VNSPKQKDELI 478
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G K I +
Sbjct: 72 TITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSS 131
Query: 437 VTVVNSPKQKDELIIEGNSLE 499
V V + K E+I+ +E
Sbjct: 132 VQVCTNNLNKKEIILLSKDIE 152
Score = 33.5 bits (73), Expect = 4.6
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 514 AALIQQSTTVKNKDIRKFLDGLYVSEK 594
++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 158 SSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T S V N+ +GV G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G
Sbjct: 54 TARSIVRNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGG 111
Query: 437 VTVVNSPKQKDELIIEGNSLEDV 505
VV+ + +++I+ G+ L DV
Sbjct: 112 TKVVS---KGEDVIVTGHVLTDV 131
Score = 39.1 bits (87), Expect = 0.093
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 134 TAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +2
Query: 266 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGV 439
SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V
Sbjct: 72 SHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKV 129
Query: 440 TV-VNSPKQKDELIIEGNSLE 499
V + K + E+++E E
Sbjct: 130 KVKIEQNKDETEIVVESPDKE 150
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/64 (25%), Positives = 37/64 (57%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 230
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 231 SKKE 242
+++E
Sbjct: 60 TRRE 63
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Query: 434 --GVTVVNSPKQKDELIIEGNSLEDV 505
V + K ++ + G E V
Sbjct: 126 WSPAEVEVKVQNKTDVTVSGADREKV 151
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
GT S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVD 125
Query: 434 GVTV 445
G V
Sbjct: 126 GCKV 129
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +2
Query: 254 GTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 433
G + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE P
Sbjct: 86 GMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VP 138
Query: 434 GVTVVNSPKQKDELIIEGNSL 496
V + P + E+I++G +
Sbjct: 139 RVAEIVDP-ENTEVIVQGQDI 158
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +2
Query: 257 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 436
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R +
Sbjct: 72 TARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGN 129
Query: 437 VTVVNSPKQKDELI 478
V+ PK +D L+
Sbjct: 130 TKVI--PKGEDVLL 141
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 511 SAALIQQSTTVKNKDIRKFLDGLYVSEK 594
+AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 152 TAANIELTTKVKNKDHRVFLDGIYVYEK 179
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 75 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 206
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV 55
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.017
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 51 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 206
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +2
Query: 233 QKGACRRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 412
Q+GA + VC +N I G G++Y +R + F +G +++ ++NFL +
Sbjct: 60 QQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDRSML 118
Query: 413 RRVKMAPGVTVVNSPKQ 463
K A + ++P++
Sbjct: 119 GDTKCAETLLRGSAPRK 135
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 15 SFSGSCVKQSPNMKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGV 149
SFS C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 590 SFSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 167
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 37.9 bits (84), Expect = 0.21
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = -3
Query: 508 RDIFQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEV 335
R+ FQ V N+ FILL R T S+ F TQE++ N +T+ + VN E+
Sbjct: 54 RNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILTIFFNNVNVNWEM 113
Query: 334 SIHSTHLVLEAFSYSFNHV 278
I+ +HLV FS + + V
Sbjct: 114 RINKSHLVFVTFSDTSDQV 132
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.37
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 117 RLVTVKGPRGVLKRNFKHLAVDIRM 191
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.37
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 164
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.65
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 170
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 36.3 bits (80), Expect = 0.65
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 194
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIV 46
>UniRef50_Q6LSH3 Cluster: Putative uncharacterized protein; n=1;
Photobacterium profundum|Rep: Putative uncharacterized
protein - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 84
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = -1
Query: 630 INVLYVI*HNS---CFLRYIKTIQELSDIL---ILDCSRLLDESSRAETSSKELPSMISS 469
I LY +NS ++ Y+ TI+ LS I+ ++ +L+D+S + S LPS+I+
Sbjct: 11 ITQLYKTSYNSDAKSYISYMSTIRHLSLIIPPHVITRKKLIDDSVQRCVLSGHLPSLITG 70
Query: 468 SFCFGEL 448
FCF L
Sbjct: 71 LFCFSVL 77
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 251 RGTVCSHVENMIKGVTKGFQYKM 319
RGT SHV NMIKGVT+G++ ++
Sbjct: 74 RGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 155
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 206
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 170
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 242
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 243 LAAVG 257
A G
Sbjct: 62 RALHG 66
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 78 VKIPDGLTVHVKSRLVTVKGPRGVLKR 158
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 158
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_Q8WRQ7 Cluster: Multiple ankyrin repeat single KH domain
protein; n=11; Fungi/Metazoa group|Rep: Multiple ankyrin
repeat single KH domain protein - Drosophila melanogaster
(Fruit fly)
Length = 4001
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -1
Query: 516 SRAETSSKELPSMISSSFCFGELTTVTPGA 427
S++E+SSK LP+ SS G+ +TV+PGA
Sbjct: 3249 SKSESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 191
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 63 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 158
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,719,487
Number of Sequences: 1657284
Number of extensions: 13263180
Number of successful extensions: 32687
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 31696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32671
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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