Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30116
         (469 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1JT20 Cluster: Zinc finger domain containing protein, ...    35   1.0  
UniRef50_O15788 Cluster: CG1; n=11; Eukaryota|Rep: CG1 - Plasmod...    35   1.0  
UniRef50_A0EG11 Cluster: Chromosome undetermined scaffold_94, wh...    35   1.0  
UniRef50_UPI0000E48E08 Cluster: PREDICTED: hypothetical protein;...    33   3.1  
UniRef50_UPI0000499B9B Cluster: zinc finger protein; n=1; Entamo...    31   9.5  
UniRef50_Q1B4B6 Cluster: Putative uncharacterized protein; n=1; ...    31   9.5  

>UniRef50_Q1JT20 Cluster: Zinc finger domain containing protein,
           putative precursor; n=1; Toxoplasma gondii RH|Rep: Zinc
           finger domain containing protein, putative precursor -
           Toxoplasma gondii RH
          Length = 1100

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 241 CNWKTPLRTNYCACCGKCTRSH 306
           C    PLRT +C  CG+CTR+H
Sbjct: 860 CAMFQPLRTKHCGHCGRCTRTH 881


>UniRef50_O15788 Cluster: CG1; n=11; Eukaryota|Rep: CG1 - Plasmodium
           falciparum
          Length = 950

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -1

Query: 265 FLKAFSNYSTRAHYAA*CSTKLQHNLALCVTESHYAL*LTIT*W*FSNY 119
           F K+FSNY     Y      KL HNL L   E+ Y   +T++ + F NY
Sbjct: 126 FFKSFSNYQYTEDYYKSLKQKLIHNLNLYYPEAIYLYRITLSGYMFCNY 174


>UniRef50_A0EG11 Cluster: Chromosome undetermined scaffold_94, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_94,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 345

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +1

Query: 226 NALLCCN-WKTPLRTNYCACCGKC 294
           N+ L CN WK P+RT++C+ CGKC
Sbjct: 102 NSCLQCNKWK-PIRTHHCSLCGKC 124


>UniRef50_UPI0000E48E08 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 320

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 241 CNWKTPLRTNYCACCGKCTR 300
           CN K P+RT +C  CG+C R
Sbjct: 127 CNIKQPVRTKHCEDCGRCVR 146


>UniRef50_UPI0000499B9B Cluster: zinc finger protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: zinc finger protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 318

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 214 IMPHNALLCCNWKTPLRTNYCACCGKC 294
           I+P N    CN   PLR ++C  C +C
Sbjct: 93  ILPRNTCETCNLVRPLRGSHCRICNRC 119


>UniRef50_Q1B4B6 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium sp. MCS|Rep: Putative uncharacterized
           protein - Mycobacterium sp. (strain MCS)
          Length = 278

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +1

Query: 244 NWKTPLRTNY-CACCGKCTR 300
           +W++  RT + C+CCG+CTR
Sbjct: 252 SWRSGARTTWLCSCCGRCTR 271


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,954,878
Number of Sequences: 1657284
Number of extensions: 5072657
Number of successful extensions: 9340
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9337
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)