Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30096
         (537 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6T0X9 Cluster: Taurine dioxygenase; n=47; Proteobacter...    32   9.6  
UniRef50_Q9NY43 Cluster: BarH-like 2 homeobox protein; n=31; Coe...    32   9.6  

>UniRef50_A6T0X9 Cluster: Taurine dioxygenase; n=47;
           Proteobacteria|Rep: Taurine dioxygenase -
           Janthinobacterium sp. (strain Marseille) (Minibacterium
           massiliensis)
          Length = 297

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 51  LWRPLAPADFTEHHMPHLLHHTRQPQSSRATPPQR 155
           L RPL  ADF+  H  HL HH    +  + TP Q+
Sbjct: 35  LTRPLDDADFSRVHQAHLDHHLLVFRDQQITPAQQ 69


>UniRef50_Q9NY43 Cluster: BarH-like 2 homeobox protein; n=31;
           Coelomata|Rep: BarH-like 2 homeobox protein - Homo
           sapiens (Human)
          Length = 387

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 60  PLAPADFTEHHMPHLLHHTRQPQSSRATPPQ 152
           P   AD T+HH  H LHH++QP    A P Q
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQ 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,692,789
Number of Sequences: 1657284
Number of extensions: 3308703
Number of successful extensions: 10474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10453
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)