Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30083
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RJ19 Cluster: Putative uncharacterized protein PY0344...    35   2.0  
UniRef50_A6PRG1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_A6LW46 Cluster: Ppx/GppA phosphatase; n=1; Clostridium ...    33   8.1  

>UniRef50_Q7RJ19 Cluster: Putative uncharacterized protein PY03447;
            n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY03447 - Plasmodium yoelii yoelii
          Length = 1525

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +1

Query: 454  NTNFFIIDRNNI*QYLMTSTDAFFYLSHKQYFPYKLQ*INTFKKSLK*CCQNFKLFNRNY 633
            N    +I+ +NI + + ++   + YL+ K Y    L  +N F  S+K C  N K  N NY
Sbjct: 1003 NQQINMIEDSNIVKNIYSNDSIYAYLNTKNY----LDTLNNFNNSMKFCFMNNKFNNINY 1058

Query: 634  KN 639
            +N
Sbjct: 1059 EN 1060


>UniRef50_A6PRG1 Cluster: Putative uncharacterized protein; n=1;
           Victivallis vadensis ATCC BAA-548|Rep: Putative
           uncharacterized protein - Victivallis vadensis ATCC
           BAA-548
          Length = 345

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +3

Query: 321 HVAGRFNYLHSSGNYDLSVKSMIRF---ISSF-LGCVDIERV 434
           H AG+F ++HS GN +  +  ++     I +F +GC+++E+V
Sbjct: 228 HAAGKFAFMHSDGNIEAILPDLVELGLDIGNFQIGCMNLEKV 269


>UniRef50_A6LW46 Cluster: Ppx/GppA phosphatase; n=1; Clostridium
           beijerinckii NCIMB 8052|Rep: Ppx/GppA phosphatase -
           Clostridium beijerinckii NCIMB 8052
          Length = 502

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -1

Query: 187 GKINLKVLKYC*FLLVNCTSLWFF*KCTHTYVRRITSNDKMHLYG 53
           GKI+ K +KY   LL N T L+   K  H YV  + +N K+ L G
Sbjct: 214 GKIHKKFIKYPLDLLHNYTMLFDEIKIIHEYVLNLNTNQKVKLKG 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,054,504
Number of Sequences: 1657284
Number of extensions: 10039314
Number of successful extensions: 20071
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20069
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)