Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30058
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKV0 Cluster: Putative uncharacterized protein; n=6; ...    33   7.6  
UniRef50_Q08BN6 Cluster: Zgc:153102; n=4; Danio rerio|Rep: Zgc:1...    33   10.0 
UniRef50_Q54Q43 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_Q8IKV0 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 3347

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 548 AHNKNNIIFDFRFCFPSLYSYLNKEYL*LINPNFLLTL 661
           ++NKNN+I  F FC   LY +LN     L N  F   L
Sbjct: 596 SYNKNNLILPFNFCLDLLYIFLNNYECFLDNFEFFKLL 633


>UniRef50_Q08BN6 Cluster: Zgc:153102; n=4; Danio rerio|Rep:
           Zgc:153102 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 253

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = -2

Query: 485 RSVQHFYIYSLSILQTDTSEVTILCMSLATLNLHIQCYQFLKLYACFILI*WTILFDYHI 306
           R++ H +I +L +    T  V  +      L+L +  Y F +L+   ++  WT++F Y +
Sbjct: 78  RTIYHMFIAALFLFFMSTLAVDYIDQGRLVLDLGLFYYAFGQLHV--VICCWTLMFSYTL 135

Query: 305 LG 300
           LG
Sbjct: 136 LG 137


>UniRef50_Q54Q43 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1141

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -2

Query: 704 QSYKKLIRNAFNVRIMLIGN*DLSVINTLYLNNYIMTGNKI 582
           ++ K LI N  NV + L+ + + S+I   YLNN+  +GN +
Sbjct: 411 EAMKTLIENGANVNMCLVDHSNHSLILNQYLNNFSNSGNSV 451


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,708,600
Number of Sequences: 1657284
Number of extensions: 11091096
Number of successful extensions: 18554
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18552
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)