Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D20
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 179 2e-44
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 162 3e-39
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 158 3e-38
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 150 9e-36
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 147 6e-35
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 129 2e-29
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 125 3e-28
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 2e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 118 6e-26
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 116 2e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 113 2e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 111 4e-24
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 109 2e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 104 8e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 99 4e-20
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 81 8e-15
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 1e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 2e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 3e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 55 6e-07
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 54 8e-07
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 1e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 36 0.23
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.2
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.8
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 31 6.4
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 6.4
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 8.5
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 179 bits (436), Expect = 2e-44
Identities = 83/109 (76%), Positives = 93/109 (85%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 354
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 162 bits (393), Expect = 3e-39
Identities = 73/98 (74%), Positives = 83/98 (84%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 321
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 158 bits (384), Expect = 3e-38
Identities = 71/113 (62%), Positives = 85/113 (75%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 366
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 150 bits (364), Expect = 9e-36
Identities = 65/99 (65%), Positives = 82/99 (82%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 324
+ LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 147 bits (357), Expect = 6e-35
Identities = 69/113 (61%), Positives = 85/113 (75%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 366
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 129 bits (311), Expect = 2e-29
Identities = 58/72 (80%), Positives = 65/72 (90%)
Frame = +1
Query: 157 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 336
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 337 RDMSRPQAVQRK 372
RDM+RPQ VQRK
Sbjct: 71 RDMARPQNVQRK 82
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 125 bits (302), Expect = 3e-28
Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Frame = +1
Query: 43 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 222
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 223 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQRK*FI 381
K LY KL+YCV CAIH KVVRN K + +T P P + PQ + F+
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQPPPKPMFL 115
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (287), Expect = 2e-26
Identities = 52/97 (53%), Positives = 69/97 (71%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 318
++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 118 bits (283), Expect = 6e-26
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 208 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 360
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 116 bits (278), Expect = 2e-25
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 208 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 330
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 113 bits (271), Expect = 2e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 58 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 237
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 238 LHYCVSCAIHSKVVRNRSKKDRRIRTP 318
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 111 bits (268), Expect = 4e-24
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 204
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 109 bits (263), Expect = 2e-23
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Frame = +1
Query: 28 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 198
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 199 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 333
VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 104 bits (249), Expect = 8e-22
Identities = 45/95 (47%), Positives = 68/95 (71%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 312
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (246), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +1
Query: 79 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 258
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 259 AIHSKVVRNRSKKDRRIRTPPK 324
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 98.7 bits (235), Expect = 4e-20
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = +1
Query: 40 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 219
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 220 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 312
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 81.0 bits (191), Expect = 8e-15
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 309
++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 70 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 240
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/108 (28%), Positives = 55/108 (50%)
Frame = +1
Query: 34 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 213
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 214 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 357
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 56.0 bits (129), Expect = 3e-07
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +1
Query: 34 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 204
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 205 PMFQLPKLYAKLHYCVSCAIHSKV 276
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 54.8 bits (126), Expect = 6e-07
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 204
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 205 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 306
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 54.4 bits (125), Expect = 8e-07
Identities = 25/97 (25%), Positives = 50/97 (51%)
Frame = +1
Query: 28 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 207
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 208 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 318
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 47.2 bits (107), Expect = 1e-04
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = -2
Query: 327 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 148
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 147 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSH 28
D LVLW+ V S +VT+++L ++ ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 36.3 bits (80), Expect = 0.23
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 22 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 201
RN RK R+G + RG V C C VP+ KAI I + + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 202 YPMFQLPKLYAKLHYCVSCA 261
+ + K++YC CA
Sbjct: 63 HTFSR------KVYYCPKCA 76
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 1.2
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 82 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 261
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 262 IHSKVVRNRSK 294
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.8
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 91 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 237
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.9 bits (69), Expect = 4.9
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +1
Query: 64 HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLH 243
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 244 YCVSCAIHSKVVRNRSKK 297
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 31.5 bits (68), Expect = 6.4
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 76 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKLHYCV 252
H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K H
Sbjct: 198 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 257
Query: 253 SCAIHSKVV-RNRSKKDRRIRTPPKS 327
C K++ + R K ++++ P S
Sbjct: 258 -CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 6.4
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 115 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 291
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 292 -----KKDRRIRT 315
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 37 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 141
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,141,527
Number of Sequences: 1657284
Number of extensions: 6575106
Number of successful extensions: 18065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18050
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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