Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0056
         (787 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1; B...    55   2e-06
UniRef50_Q1HQR2 Cluster: Activating transcription factor; n=2; A...    35   2.0  
UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE...    33   6.1  

>UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1;
           Bombyx mori|Rep: Activating transcription factor -
           Bombyx mori (Silk moth)
          Length = 236

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +2

Query: 626 TSQPTEELLREFETVYGAVELTHFNTAGRVPPG 724
           TSQPTEELLREFETVYGAVELTH  T  + PPG
Sbjct: 27  TSQPTEELLREFETVYGAVELTHL-TPPQSPPG 58


>UniRef50_Q1HQR2 Cluster: Activating transcription factor; n=2;
           Aedes aegypti|Rep: Activating transcription factor -
           Aedes aegypti (Yellowfever mosquito)
          Length = 405

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = +2

Query: 632 QPTEELLREFETVYGAVELTHFNTAGRVPPGTREFSXLSE 751
           Q TEELL EF+ VY  VELTH  T  + PP   ++    E
Sbjct: 132 QNTEELLMEFDYVYENVELTHL-TPPQTPPQEDQYHGAGE 170


>UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE1;
           n=17; Eukaryota|Rep: Putative glycoprotein endopeptidase
           KAE1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 386

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +2

Query: 110 HNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLL 211
           +NI+ LAK AP ++ LV L  T   +D++ SG+L
Sbjct: 210 YNIEQLAKKAPHKENLVELPYTVKGMDLSMSGIL 243


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,757,782
Number of Sequences: 1657284
Number of extensions: 14944221
Number of successful extensions: 38076
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38071
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)